FFCP PHASE1:Mm9::chr6:3349545..3349574,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=209086|HGNC=|UniProt=E9PX59,Q8BZG4,Q69Z37|association_with_transcript=0bp_to_ENSMUST00000120087,NM_010156,uc009auy.2_5end|description=CAGE_peak_2_at_Samd9l_5end|id=chr6:3349545..3349574,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000107,5.27e-10,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!1.42e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.93e-13,11;UBERON:0002410,5.27e-10,9;UBERON:0010313,9.18e-07,3;UBERON:0002342,9.18e-07,3;UBERON:0002005,9.18e-07,3;UBERON:0005428,9.18e-07,3;UBERON:0005062,9.18e-07,3|phase1_expression=0.480446541314382,0,0,0,0,0,0.467225281191051,0.129123323441576,0,0,0,0.0797721589953364,0.171200729931206,0.174840804837995,0,0.607425802169478,0,0.157731082679119,0.274228867211478,0,1.19060606211498,0.198581902401771,0,0,0,0,0,0,0.190023419456374,0.504060259519861,0,0,0,0,0.288851619751275,0,0,0.837063261473815,0,0.523523743973798,0,0.683045484958446,0.971020706062307,0.755380907853464,1.72340783073175,0.367093504323363,3.12956537739216,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0.257259436035947,1.14613375975503,2.06268836910977,0,0,0,0.338844532069132,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0.766124028511126,0.153606533256243,0,0,0,0,1.12552522006336,0.45839474333043,0,0.427115042397309,0.372798891650601,1.81742863999642,3.09843396437821,0.869593466105033,0,0,0,0.649776417447669,0.448026887097336,0.421333260395256,2.38602451609281,2.33807404142582,1.7666978725517,0.704217098883403,1.28326477414318,2.54805239706646,0,0,0,0,1.02765491747154,0.517875767294343,1.1875371125186,0.173485326766136,0.608930956624282,0.230615497256059,0.452167921657868,0.352766121407114,0.879666139307728,0.494389935468748,1.73519228303894,0,1.13236794963186,0.662524555381181,1.45462575940567,0,0,0.209446706813455,0,0,0.599902730993408,0,0,0,0,0.869121600961382,1.02286182932132,0.20778804455956,0,0.712875546952214,0.995255764880744,0.252722758433675,0.210441855886474,0,0,0,0.30140963567143,0.204109497453984,0.2562274405697,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0,0,1.0447564995665,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0,0.36012412292203,0.473489471170421,0.196764231747404,0.154267112887378,0.465067889500816,0.536546802799238,0.116765342367169,0,0.164167464079095,0.648550476366846,0.146199987425332,0.439100230582101,0.268412837520744,0.420579897128254,0.102904612379284,0.330418782983798,0.793351699990633,0.213288250535234,0,0.515469845288373,0.403367049246685,0.22237804384487,0.380451252225118,1.42358718463353,0.164698954724011,1.00534083520108,0.596869416123452,0.58489226135736,0.898819408654221,0.432276099749388,0.597423819763102,0,0.342745537829186,1.1270773567308,0.610953983535943,0.387904974335251,0.631222379012867,3.66771915320692,5.31396532726568,3.767969468193,4.81248939295022,0,0.166845105716094,0.393117990226406,0,0.202860121388503,0.241177159752417,0.25462585178142,0.863088412352432,0.162135226775035,0,0,0,0.624075346229121,0,0.538192240565737,0.964887042726734,0.923765950833023,0,0.162964976442026,0.169745085775188,0.469380496577004,1.00503754465089,1.42826184531608,0.780534591431195,0.630540576424764,1.55025282754142,0.956728611944923,0.983179888294428,1.03610989119537,1.01254341007058,0,0.54390568381871,0.491764273019036,0.551873492609465,0.321101179975584,0.35163505977661,0.655739781506702,0.757412781613119,3.15508219416257,2.73307121007647,1.07711698866399,1.19484398976276,0.891194696329576,0.849229592366497,2.02405350837447,2.04579100537918,1.18586333383957,0.642642632843614,1.41940085208269,0.35613120733451,0.81443479676788,2.63952196756057,0,0,0.302323556964751,0.943025398779491,0.295301892880773,0.614870295887855,0,1.09060118843252,0.712994756769443,0,1.05418608574999,1.03135543248187,1.02131881726136,0,0.258717367565509,0.214337035031592,0.354680467284547,0.535106452806212,0.493647061806363,0,0.469343416127421,0,0.441056796109924,0.65954501176592,0.161464426695906,0.301564624640779,0.119372344003136,0.164140899745061,0,0.18542530201051,0,0,0,0.753473828018764,0.683471138605126,0.228778173206523,0,0.139951452323658,0,0,0,0.203319467126849,0.216010681643603,0.627264888043406,0.436725127492355,0.539457385539283,0.743881101528023,1.04702376793612,0.90730481304255,0,0,0,0,0,0.258319646955462,0.675824501963113,0.704143431874524,0.911430693907651,0.524296722128554,0,0,0.316011120628178,0,0,0.129920822977795,0,0,0.480781798079875,0.738447635872886,0.403865799792591,0.533447646584999,0.100826185136841,0.584747284438515,0.865906574762965,0.584384510907845,0.906921534460845,0,0,0,1.54551675225752,1.68914227906064,2.56412273974171,0.857473516316263,0,0.564751842617067,0.920650473014354,0,0.859265911718438,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0.367687016900028,0.666740183404846,0.206035057238894,0.320919209591815,0.252697211763798,0,0.188626341386076,0.655490552289177,0.512201219238954,0.114870937911227,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| ||
|EntrezGene=209086 | |||
|HGNC= | |||
|UniProt=E9PX59,Q8BZG4,Q69Z37 | |||
|association_with_transcript=0bp_to_ENSMUST00000120087,NM_010156,uc009auy.2_5end | |||
|description=CAGE_peak_2_at_Samd9l_5end | |||
|id=chr6:3349545..3349574,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,5.27e-10,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!1.42e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.93e-13,11;UBERON:0002410,5.27e-10,9;UBERON:0010313,9.18e-07,3;UBERON:0002342,9.18e-07,3;UBERON:0002005,9.18e-07,3;UBERON:0005428,9.18e-07,3;UBERON:0005062,9.18e-07,3 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0.467225281191051,0.129123323441576,0,0,0,0.0797721589953364,0.171200729931206,0.174840804837995,0,0.607425802169478,0,0.157731082679119,0.274228867211478,0,1.19060606211498,0.198581902401771,0,0,0,0,0,0,0.190023419456374,0.504060259519861,0,0,0,0,0.288851619751275,0,0,0.837063261473815,0,0.523523743973798,0,0.683045484958446,0.971020706062307,0.755380907853464,1.72340783073175,0.367093504323363,3.12956537739216,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0.257259436035947,1.14613375975503,2.06268836910977,0,0,0,0.338844532069132,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0.766124028511126,0.153606533256243,0,0,0,0,1.12552522006336,0.45839474333043,0,0.427115042397309,0.372798891650601,1.81742863999642,3.09843396437821,0.869593466105033,0,0,0,0.649776417447669,0.448026887097336,0.421333260395256,2.38602451609281,2.33807404142582,1.7666978725517,0.704217098883403,1.28326477414318,2.54805239706646,0,0,0,0,1.02765491747154,0.517875767294343,1.1875371125186,0.173485326766136,0.608930956624282,0.230615497256059,0.452167921657868,0.352766121407114,0.879666139307728,0.494389935468748,1.73519228303894,0,1.13236794963186,0.662524555381181,1.45462575940567,0,0,0.209446706813455,0,0,0.599902730993408,0,0,0,0,0.869121600961382,1.02286182932132,0.20778804455956,0,0.712875546952214,0.995255764880744,0.252722758433675,0.210441855886474,0,0,0,0.30140963567143,0.204109497453984,0.2562274405697,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0,0,1.0447564995665,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0,0.36012412292203,0.473489471170421,0.196764231747404,0.154267112887378,0.465067889500816,0.536546802799238,0.116765342367169,0,0.164167464079095,0.648550476366846,0.146199987425332,0.439100230582101,0.268412837520744,0.420579897128254,0.102904612379284,0.330418782983798,0.793351699990633,0.213288250535234,0,0.515469845288373,0.403367049246685,0.22237804384487,0.380451252225118,1.42358718463353,0.164698954724011,1.00534083520108,0.596869416123452,0.58489226135736,0.898819408654221,0.432276099749388,0.597423819763102,0,0.342745537829186,1.1270773567308,0.610953983535943,0.387904974335251,0.631222379012867,3.66771915320692,5.31396532726568,3.767969468193,4.81248939295022,0,0.166845105716094,0.393117990226406,0,0.202860121388503,0.241177159752417,0.25462585178142,0.863088412352432,0.162135226775035,0,0,0,0.624075346229121,0,0.538192240565737,0.964887042726734,0.923765950833023,0,0.162964976442026,0.169745085775188,0.469380496577004,1.00503754465089,1.42826184531608,0.780534591431195,0.630540576424764,1.55025282754142,0.956728611944923,0.983179888294428,1.03610989119537,1.01254341007058,0,0.54390568381871,0.491764273019036,0.551873492609465,0.321101179975584,0.35163505977661,0.655739781506702,0.757412781613119,3.15508219416257,2.73307121007647,1.07711698866399,1.19484398976276,0.891194696329576,0.849229592366497,2.02405350837447,2.04579100537918,1.18586333383957,0.642642632843614,1.41940085208269,0.35613120733451,0.81443479676788,2.63952196756057,0,0,0.302323556964751,0.943025398779491,0.295301892880773,0.614870295887855,0,1.09060118843252,0.712994756769443,0,1.05418608574999,1.03135543248187,1.02131881726136,0,0.258717367565509,0.214337035031592,0.354680467284547,0.535106452806212,0.493647061806363,0,0.469343416127421,0,0.441056796109924,0.65954501176592,0.161464426695906,0.301564624640779,0.119372344003136,0.164140899745061,0,0.18542530201051,0,0,0,0.753473828018764,0.683471138605126,0.228778173206523,0,0.139951452323658,0,0,0,0.203319467126849,0.216010681643603,0.627264888043406,0.436725127492355,0.539457385539283,0.743881101528023,1.04702376793612,0.90730481304255,0,0,0,0,0,0.258319646955462,0.675824501963113,0.704143431874524,0.911430693907651,0.524296722128554,0,0,0.316011120628178,0,0,0.129920822977795,0,0,0.480781798079875,0.738447635872886,0.403865799792591,0.533447646584999,0.100826185136841,0.584747284438515,0.865906574762965,0.584384510907845,0.906921534460845,0,0,0,1.54551675225752,1.68914227906064,2.56412273974171,0.857473516316263,0,0.564751842617067,0.920650473014354,0,0.859265911718438,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0.367687016900028,0.666740183404846,0.206035057238894,0.320919209591815,0.252697211763798,0,0.188626341386076,0.655490552289177,0.512201219238954,0.114870937911227,0,0.463537303779422,0.578727661391115,0,0.147198920134397,0,0.354951612318675,0,0.726732083161643,0.376437521661322,0.25384382367503,0.182927972872773,0,0.407412341537585,0.561142271657738,0.474540072496697,0.492522411877817,0.409231043169689,0.309873682371932,0.192906610981141,0,0.935726433781634,0,0.57386499620653,0.441182838239031,0.231867835620421 | |||
|short_description=p2@Samd9l | |||
}} |
Revision as of 09:40, 14 September 2013
Short description: | p2@Samd9l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Samd9l_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000120087, NM_010156, uc009auy.2_5end |
EntrezGene: | Samd9l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 5.27e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 1.93e-13 | 11 |
autonomic nervous system | 5.27e-10 | 9 |
neural crest-derived structure | 9.18e-07 | 3 |
neural crest | 9.18e-07 | 3 |
enteric nervous system | 9.18e-07 | 3 |
vagal neural crest | 9.18e-07 | 3 |
neural fold | 9.18e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.