FFCP PHASE1:Mm9::chr6:41586388..41586408,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=64177|HGNC=|MCL_coexpression_id=125|UniProt=Q91WD2,E9PXU7,A2JY27|association_with_transcript=0bp_to_ENSMUST00000031902,ENSMUST00000101476,NM_022413,uc009bqc.2_5end|description=CAGE_peak_1_at_Trpv6_5end|id=chr6:41586388..41586408,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.54e-10!59;UBERON:0004119!4.32e-08!130;UBERON:0000925!4.32e-08!130;UBERON:0006595!4.32e-08!130;UBERON:0000474!6.19e-08!9;UBERON:0000160!1.34e-07!43;UBERON:0004921!2.20e-07!126;UBERON:0004185!2.20e-07!126;UBERON:0002048!2.75e-07!14;UBERON:0000117!2.75e-07!14;UBERON:0000171!2.75e-07!14;UBERON:0000170!2.75e-07!14;UBERON:0005597!2.75e-07!14;UBERON:0000118!2.75e-07!14;UBERON:0003975!3.88e-07!5;UBERON:0001007!4.56e-07!128;UBERON:0001555!4.56e-07!128;UBERON:0007026!4.56e-07!128;UBERON:0003134!6.27e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0004175,4.49e-14,9;UBERON:0003975,6.34e-14,5;UBERON:0005795,1.70e-11,4;UBERON:0000995,1.70e-11,4;UBERON:0000474,1.51e-10,9;UBERON:0005631,9.90e-09,3;UBERON:0000478,9.90e-09,3;UBERON:0000158,9.90e-09,3;UBERON:0003134,1.52e-08,8;UBERON:0003100,1.73e-08,11;UBERON:0000014,5.10e-08,5;UBERON:0001003,5.10e-08,5;UBERON:0002097,5.10e-08,5;UBERON:0002199,5.10e-08,5;UBERON:0007029,5.10e-08,5;UBERON:0007376,5.10e-08,5;UBERON:0002416,5.10e-08,5;UBERON:0007383,5.10e-08,5;UBERON:0005409,6.88e-07,47;UBERON:0000160,7.52e-07,31|phase1_expression=0,0,0.454999239389536,2.72217790176147,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0.376999773989026,7.16865406429684,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0.347648640384553,0,0,0,0,0,3.28539585963777,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61711931072457,10.5780226665418,0,0,0,0,0,0,19.9302205848695,0,0.754005626400808,1.59165177632921,3.31438948102504,17.0775687644302,7.99710784536369,22.1046813312348,0,0.571242563048644,0,0.203651327845314,0.387904974335251,0.420814919341911,0,0,0,0.246794327843601,0,0,0,0,0.202860121388503,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.369506380333209,0.37898282354097,0.162964976442026,0,0,0.670025029767263,0.238043640886014,2.14647012643579,0.630540576424764,1.10732344824387,0.159454768657487,0.327726629431476,0.518054945597687,0.433947175744535,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0,0.162886959353576,4.94910368917606,0,0,0,0.188605079755898,0,0.307435147943927,1.03371317267288,0.363533729477506,0.712994756769443,0.316036757935816,1.05418608574999,1.03135543248187,0,0,0.388076051348264,0,0,0,0,0,3.75474732901937,10.8034356140548,0.220528398054962,2.14352128823924,0.161464426695906,1.20625849856312,2.38744688006273,5.9090723908222,20.9866202373493,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0.632671987162271,0.406638934253697,1.83609079397062,0.209088296014469,2.40198820120795,0.944050424693745,0.826534557253359,0,276.339123058102,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,11.2609485270709,54.2128807831105,9.4322086794789,5.01572104035363,0,1.38097570952153,0,0.171853182343688,1.37016503954128,0.755393897389701,0,0.900642406448441,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.377252682772152,0.0936415074698824,0.192075457214608,0,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.25384382367503,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p1@Trpv6}} | ||
|EntrezGene=64177 | |||
|HGNC= | |||
|MCL_coexpression_id=125 | |||
|UniProt=Q91WD2,E9PXU7,A2JY27 | |||
|association_with_transcript=0bp_to_ENSMUST00000031902,ENSMUST00000101476,NM_022413,uc009bqc.2_5end | |||
|description=CAGE_peak_1_at_Trpv6_5end | |||
|id=chr6:41586388..41586408,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.54e-10!59;UBERON:0004119!4.32e-08!130;UBERON:0000925!4.32e-08!130;UBERON:0006595!4.32e-08!130;UBERON:0000474!6.19e-08!9;UBERON:0000160!1.34e-07!43;UBERON:0004921!2.20e-07!126;UBERON:0004185!2.20e-07!126;UBERON:0002048!2.75e-07!14;UBERON:0000117!2.75e-07!14;UBERON:0000171!2.75e-07!14;UBERON:0000170!2.75e-07!14;UBERON:0005597!2.75e-07!14;UBERON:0000118!2.75e-07!14;UBERON:0003975!3.88e-07!5;UBERON:0001007!4.56e-07!128;UBERON:0001555!4.56e-07!128;UBERON:0007026!4.56e-07!128;UBERON:0003134!6.27e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004175,4.49e-14,9;UBERON:0003975,6.34e-14,5;UBERON:0005795,1.70e-11,4;UBERON:0000995,1.70e-11,4;UBERON:0000474,1.51e-10,9;UBERON:0005631,9.90e-09,3;UBERON:0000478,9.90e-09,3;UBERON:0000158,9.90e-09,3;UBERON:0003134,1.52e-08,8;UBERON:0003100,1.73e-08,11;UBERON:0000014,5.10e-08,5;UBERON:0001003,5.10e-08,5;UBERON:0002097,5.10e-08,5;UBERON:0002199,5.10e-08,5;UBERON:0007029,5.10e-08,5;UBERON:0007376,5.10e-08,5;UBERON:0002416,5.10e-08,5;UBERON:0007383,5.10e-08,5;UBERON:0005409,6.88e-07,47;UBERON:0000160,7.52e-07,31 | |||
|phase1_expression=0,0,0.454999239389536,2.72217790176147,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0.376999773989026,7.16865406429684,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0.347648640384553,0,0,0,0,0,3.28539585963777,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61711931072457,10.5780226665418,0,0,0,0,0,0,19.9302205848695,0,0.754005626400808,1.59165177632921,3.31438948102504,17.0775687644302,7.99710784536369,22.1046813312348,0,0.571242563048644,0,0.203651327845314,0.387904974335251,0.420814919341911,0,0,0,0.246794327843601,0,0,0,0,0.202860121388503,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.369506380333209,0.37898282354097,0.162964976442026,0,0,0.670025029767263,0.238043640886014,2.14647012643579,0.630540576424764,1.10732344824387,0.159454768657487,0.327726629431476,0.518054945597687,0.433947175744535,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0,0.162886959353576,4.94910368917606,0,0,0,0.188605079755898,0,0.307435147943927,1.03371317267288,0.363533729477506,0.712994756769443,0.316036757935816,1.05418608574999,1.03135543248187,0,0,0.388076051348264,0,0,0,0,0,3.75474732901937,10.8034356140548,0.220528398054962,2.14352128823924,0.161464426695906,1.20625849856312,2.38744688006273,5.9090723908222,20.9866202373493,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0.632671987162271,0.406638934253697,1.83609079397062,0.209088296014469,2.40198820120795,0.944050424693745,0.826534557253359,0,276.339123058102,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,11.2609485270709,54.2128807831105,9.4322086794789,5.01572104035363,0,1.38097570952153,0,0.171853182343688,1.37016503954128,0.755393897389701,0,0.900642406448441,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.377252682772152,0.0936415074698824,0.192075457214608,0,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.25384382367503,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p1@Trpv6 | |||
}} |
Revision as of 09:58, 14 September 2013
Short description: | p1@Trpv6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Trpv6_5end |
Coexpression cluster: | MCL_coexpression_mm9:125 |
Association with transcript: | 0bp_to_ENSMUST00000031902, ENSMUST00000101476, NM_022413, uc009bqc.2_5end |
EntrezGene: | Trpv6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
internal genitalia | 4.49e-14 | 9 |
internal female genitalia | 6.34e-14 | 5 |
embryonic uterus | 1.70e-11 | 4 |
uterus | 1.70e-11 | 4 |
female reproductive system | 1.51e-10 | 9 |
extraembryonic membrane | 9.90e-09 | 3 |
extraembryonic structure | 9.90e-09 | 3 |
membranous layer | 9.90e-09 | 3 |
female reproductive organ | 1.52e-08 | 8 |
female organism | 1.73e-08 | 11 |
zone of skin | 5.10e-08 | 5 |
skin epidermis | 5.10e-08 | 5 |
skin of body | 5.10e-08 | 5 |
integument | 5.10e-08 | 5 |
surface | 5.10e-08 | 5 |
outer epithelium | 5.10e-08 | 5 |
integumental system | 5.10e-08 | 5 |
enveloping layer of ectoderm | 5.10e-08 | 5 |
gastrointestinal system | 6.88e-07 | 47 |
intestine | 7.52e-07 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.