FFCP PHASE1:Mm9::chr6:6827952..6827955,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=184|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:6827952..6827955,-|id=chr6:6827952..6827955,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002609,3.32e-16,6;CL:0002608,4.32e-13,3;CL:0000117,2.43e-07,23;CL:0000337,2.43e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002780!4.18e-08!39;UBERON:0001890!4.18e-08!39;UBERON:0006240!4.18e-08!39;UBERON:0003080!1.06e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.47e-07,29;UBERON:0002791,2.47e-07,29;UBERON:0001893,2.47e-07,29;UBERON:0000369,3.56e-07,5;UBERON:0002435,3.56e-07,5;UBERON:0000204,3.56e-07,5;UBERON:0010082,3.56e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0.384218305321555,0.311068836925433,1.62007125998029,1.05162480675691,0,0,7.22695715368229,7.18841032636773,8.27296907949019,0,0.127687338085188,0,1.05509030184155,0.731901148819277,2.08365348222704,0,0,0.30559649555362,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,3.40860645156115,5.45550609666024,3.5333957451034,0.14084341977668,2.56652954828636,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0.230615497256059,0,0,0.125666591329675,0,0,0,0.323533699894818,1.32504911076236,0.969750506270444,0,0,0,0,0,0,0,0,0,2.26177833803156,0.173824320192276,0,0.83115217823824,0.648965052271031,0.203678727700633,0.622034853050465,0,0,0.130120442962704,0,0,0.150704817835715,0,0,0,0,0.431135985865684,0.567318240503458,0.703804496655795,1.31517439456545,1.66828349535359,0.348252166522167,0.823128545631774,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.720332286654991,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.504941854408746,0,0,0,0,0.445597348164788,0,0,0,0,2.57057053137446,0.567760340833074,1.42452482933804,0.81443479676788,0.989820737835213,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0.517434735131018,1.07168517515796,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0.161464426695906,0.120625849856312,1.07435109602823,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0.436725127492355,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864090018773596,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,2.38097111547445,2.57242054894879,0,0,0,0,0.859265911718438,0,0,0,0,0.453142408984205,0.51776031175182,0.415149390336707,0,0.853668028770671,0.972426868273176,0.209613162627982,0.919217542250071,0.44449345560323,0.206035057238894,0.320919209591815,0.505394423527595,0.760437899670719,0.188626341386076,0.749132059759059,0.576226371643824,0.402048282689293,0,0.579421629724277,0.38581844092741,0.412085900803307,0.441596760403192,0.685738504770831,0.887379030796687,0.953744759789284,0.726732083161643,1.03520318456864,0.761531471025089,0.182927972872773,0.263069711437843,0.679020569229309,1.12228454331548,0.237270036248348,0.591026894253381,0.818462086339379,0.929621047115796,0.385813221962283,0.749431733813838,0.467863216890817,0.214871054048298,0.57386499620653,0.661774257358546,0.231867835620421|short_description=p@chr6:6827952..6827955,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=184 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:6827952..6827955,- | |||
|id=chr6:6827952..6827955,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,3.32e-16,6;CL:0002608,4.32e-13,3;CL:0000117,2.43e-07,23;CL:0000337,2.43e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!4.18e-08!39;UBERON:0001890!4.18e-08!39;UBERON:0006240!4.18e-08!39;UBERON:0003080!1.06e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.47e-07,29;UBERON:0002791,2.47e-07,29;UBERON:0001893,2.47e-07,29;UBERON:0000369,3.56e-07,5;UBERON:0002435,3.56e-07,5;UBERON:0000204,3.56e-07,5;UBERON:0010082,3.56e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0.384218305321555,0.311068836925433,1.62007125998029,1.05162480675691,0,0,7.22695715368229,7.18841032636773,8.27296907949019,0,0.127687338085188,0,1.05509030184155,0.731901148819277,2.08365348222704,0,0,0.30559649555362,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,3.40860645156115,5.45550609666024,3.5333957451034,0.14084341977668,2.56652954828636,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0.230615497256059,0,0,0.125666591329675,0,0,0,0.323533699894818,1.32504911076236,0.969750506270444,0,0,0,0,0,0,0,0,0,2.26177833803156,0.173824320192276,0,0.83115217823824,0.648965052271031,0.203678727700633,0.622034853050465,0,0,0.130120442962704,0,0,0.150704817835715,0,0,0,0,0.431135985865684,0.567318240503458,0.703804496655795,1.31517439456545,1.66828349535359,0.348252166522167,0.823128545631774,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.720332286654991,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.504941854408746,0,0,0,0,0.445597348164788,0,0,0,0,2.57057053137446,0.567760340833074,1.42452482933804,0.81443479676788,0.989820737835213,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0.517434735131018,1.07168517515796,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0.161464426695906,0.120625849856312,1.07435109602823,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0.436725127492355,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864090018773596,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,2.38097111547445,2.57242054894879,0,0,0,0,0.859265911718438,0,0,0,0,0.453142408984205,0.51776031175182,0.415149390336707,0,0.853668028770671,0.972426868273176,0.209613162627982,0.919217542250071,0.44449345560323,0.206035057238894,0.320919209591815,0.505394423527595,0.760437899670719,0.188626341386076,0.749132059759059,0.576226371643824,0.402048282689293,0,0.579421629724277,0.38581844092741,0.412085900803307,0.441596760403192,0.685738504770831,0.887379030796687,0.953744759789284,0.726732083161643,1.03520318456864,0.761531471025089,0.182927972872773,0.263069711437843,0.679020569229309,1.12228454331548,0.237270036248348,0.591026894253381,0.818462086339379,0.929621047115796,0.385813221962283,0.749431733813838,0.467863216890817,0.214871054048298,0.57386499620653,0.661774257358546,0.231867835620421 | |||
|short_description=p@chr6:6827952..6827955,- | |||
}} |
Revision as of 10:28, 14 September 2013
Short description: | p@chr6:6827952..6827955, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:6827952..6827955, - |
Coexpression cluster: | MCL_coexpression_mm9:184 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 3.32e-16 | 6 |
hippocampal neuron | 4.32e-13 | 3 |
CNS neuron (sensu Vertebrata) | 2.43e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.43e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 2.47e-07 | 29 |
regional part of telencephalon | 2.47e-07 | 29 |
telencephalon | 2.47e-07 | 29 |
corpus striatum | 3.56e-07 | 5 |
striatum | 3.56e-07 | 5 |
ventral part of telencephalon | 3.56e-07 | 5 |
future corpus striatum | 3.56e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.