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FFCP PHASE1:Mm9::chr7:129210906..129210974,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=28018|HGNC=|UniProt=E9QB07|association_with_transcript=0bp_to_ENSMUST00000124733,ENSMUST00000133390,ENSMUST00000170688_5end|description=CAGE_peak_1_at_Ubfd1_5end|id=chr7:129210906..129210974,+|ontology_enrichment_celltype=CL:0000117!2.10e-09!23;CL:0000337!2.10e-09!23;CL:0000540!1.29e-08!33;CL:0000047!1.29e-08!33;CL:0000031!1.29e-08!33;CL:0000404!1.29e-08!33;CL:0000393!1.92e-07!39;CL:0000211!1.92e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,2.10e-09,23;CL:0000337,2.10e-09,23;CL:0000540,1.29e-08,33;CL:0000047,1.29e-08,33;CL:0000031,1.29e-08,33;CL:0000404,1.29e-08,33;CL:0000393,1.92e-07,39;CL:0000211,1.92e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!2.00e-07!333;UBERON:0000922!5.01e-07!328|ontology_enrichment_uberon_v019_2=|phase1_expression=46.7634633545998,47.4606554389531,45.4999239389536,62.9125559518207,82.6477954411473,53.0498499241572,62.1409623984098,35.8962839167582,43.3629264227134,39.5569049484169,44.5166717386313,48.0228397151925,22.0848941611255,27.1003247498892,26.3156711834374,23.8920815519995,16.7894850750755,40.2214260831753,43.8766187538364,47.5316410013794,36.0583550240536,44.7802189915993,54.5907559300375,49.7576434887495,42.2113077163593,47.6612530215467,53.8452495198843,42.2323616064343,41.8051522804023,47.8857246543868,45.4547546843375,47.6273005094723,53.5106365198576,31.6963362030877,30.0405684541326,41.2261920489061,30.421234083093,12.5559489221072,14.8453715459522,11.5175223674236,8.82347232046521,8.87959130445979,11.6522484727477,43.8120926555009,47.3430268795133,47.5386088098755,54.7673941043627,42.950955806948,37.3466510648602,40.4414190074509,41.1560079578566,23.0004102983955,37.7510863629907,39.8949178106239,35.6259427091012,54.0244815675489,48.9972182295274,50.5358650431893,103.788344420974,110.030123688583,97.6100361399516,73.5292634590017,61.3613409316686,44.9949858640699,58.3431153914515,49.0231279312809,46.7376172408711,39.1902671427986,63.7691115697138,67.0979513508503,66.4626877870367,102.263052416562,98.286500723468,56.5907492373088,67.5710570678566,53.3146896233812,56.1590993096882,56.437803433653,63.1322851683161,101.552441552249,100.910870893458,85.4297927713086,63.3745407733135,69.2198010338966,58.0633341551878,99.5844618900997,95.1042827738008,93.5725218043009,35.1369537065974,28.4904781602581,26.087803983151,52.4858564958646,54.39770669662,42.0968489477497,47.4336784736798,29.5697745484241,30.4764391685902,17.724753548118,25.718814455684,17.3136391510067,44.506520649431,25.6652954828636,48.4129955442627,99.5493384414664,40.483824669097,36.9905403593644,42.4640533812418,35.8537382317848,40.653247732606,42.0091253553454,71.9964106079464,52.6725277480004,54.4252573524298,48.2312449768392,49.2696682898603,40.4646424081555,65.0122765141403,24.2926919625452,30.0767587662957,53.0595267827502,31.5803371398363,31.5168914537894,37.2783522436244,37.1831612204665,38.9570874673026,40.1067576677488,23.9630249011841,31.1949420116572,26.9388881394897,50.4794454794253,48.0375632959558,58.0523106761434,37.0245802009549,51.6545223807268,43.4277013129481,51.1059978663437,77.907113345492,38.3173469479086,64.444303400587,19.1502088856691,91.8650327316688,76.78730288078,77.0665915566895,63.2960234910003,51.5716663567065,48.8113274285278,49.1934053938576,40.0990224645474,104.119340586563,90.9600245607211,87.4477087094826,85.9247271116093,78.6873715308442,64.0783986400786,59.4710374218957,97.7258250078802,49.1549231119264,39.1168818814367,32.110475431702,76.2222842930647,81.1460167534593,75.2659416907042,80.7299548345567,67.6868957211069,57.6959002198795,56.5057485743491,53.3864068785242,59.5503246072564,57.2668277698912,48.7577368314913,48.7223545370593,42.690396328197,49.3987759404864,40.3961320468719,37.8521907415429,65.9618565351213,22.1380584599145,54.2123661660266,91.7139477301506,75.2446816827821,76.8050069479676,62.3202091086128,64.0448766273227,50.2195652937156,41.758557415917,50.0684822360993,51.0210473864547,43.7704238490532,48.74102177978,52.1315257019448,31.9884313814547,32.6591688137162,87.6265702403237,76.8892489863475,76.6412602576947,61.5027010092849,55.2764588427733,52.8122723774099,47.8700586030628,42.659332766105,34.3827213972611,35.5383832094786,45.9501571985081,47.884545340519,40.8842709835462,41.1497665664282,42.1949052488086,39.3118770396439,40.4855104332458,43.7298128925232,36.804696477933,42.8315804573407,53.1942364151212,36.8419538191818,43.997311909153,41.4229359833263,44.4905585534342,35.2183770595258,24.756927482325,90.1979120027507,74.4749942340058,66.5400736238738,56.7950400858175,52.2619523218465,46.1804663318867,39.6121305151332,47.2905432318573,39.1992500678332,49.112068746506,29.3315333341171,31.6013516814589,28.2065664233948,33.1740824666399,52.7588513304148,33.9317348383135,48.2889306033282,54.5872005958493,60.7156536547612,44.426370197079,41.4052320615172,61.5241027861701,60.518005365979,47.6085708989486,56.1576675188497,51.466493713033,53.2183877883005,48.9820949026622,55.2363571452379,57.7120155801924,38.8798792870387,50.9564905897684,99.1825412426612,69.7156186033306,43.0572020958318,34.5137359683903,73.0769714826494,91.9063613172843,80.3457639760126,87.114058399828,70.0952137312155,52.4609435131489,54.5300594216258,58.822067433479,55.6224693967036,64.3053512307493,50.5364161916116,75.5775924773409,88.4099971693733,98.7006757262417,85.9491510476685,91.6849007930554,79.1957550153193,70.0978827765035,75.202842431306,108.653000833498,127.734738730884,66.3790478145435,29.6795255294664,39.5587845404969,43.5459317981285,42.3771821211134,44.6463247306567,39.9328746182896,52.2899351669637,34.3450470403684,57.7883230297023,31.6682641802207,19.4019510714832,25.4251263561107,26.3094899187501,21.2473037492319,25.7510672275531,25.428795180014,22.9120948323627,90.3139261674141,83.9709399233885,59.8349588152779,62.7264888043406,49.5683019703823,45.853877770839,43.1451038886254,33.5047605739558,30.2002887769877,35.4163408459548,43.9680492173668,91.653642724959,93.3185886178031,73.308098005706,72.071181500574,64.710196062968,61.7299075276666,68.2270976582299,68.2634332211378,41.794052902899,36.8678408010068,37.9213344753814,74.6028792267804,53.2042758113805,49.8895960234733,44.2195938298679,44.7033048257846,36.2990257550306,41.9438257175799,37.6604858306591,38.1796101341549,37.7089932411784,41.2246835529153,37.8112537646495,37.0499779915574,20.6324649089842,111.880920500529,92.3155584511505,107.110385240282,33.2286101735368,57.2431550126105,43.9563898241436,22.723048182381,55.6745035479253,49.6981621503019,42.8102469951675,44.1129545348335,43.994414679984,34.9392085083028,36.2589070747056,47.9265975164582,44.5817991191978,40.3296743995942,40.385304316642,108.35399087788,73.4205767057897,83.8302004252799,73.4182285546248,88.2471414663806,70.0443767194554,60.673356689841,62.8406924578627,58.4072961457104,56.3514782233268,54.2445701765113,54.7016390019621,52.8138102130137,48.467040370486,51.5196156531851,48.5819565108735,54.5815175200269,51.1209434228818,59.7524556164795,55.935589651071,65.4880272056143,59.9868224818561,59.1321751069356,51.8886707377413,58.912472139997,52.7149007165145,58.3540233464145,51.2985937303794,52.1487797168109,65.0925035122977,58.3684289170937,54.0789608241843,58.1108081300959,53.2982733679723,60.5726758480784,71.1960147123146,57.5471756775705,47.9162450527705,54.8997513037581,41.9123696327079,40.3450033979533|short_description=p1@Ubfd1}}
|EntrezGene=28018
|HGNC=
|UniProt=E9QB07
|association_with_transcript=0bp_to_ENSMUST00000124733,ENSMUST00000133390,ENSMUST00000170688_5end
|description=CAGE_peak_1_at_Ubfd1_5end
|id=chr7:129210906..129210974,+
|ontology_enrichment_celltype=CL:0000117!2.10e-09!23;CL:0000337!2.10e-09!23;CL:0000540!1.29e-08!33;CL:0000047!1.29e-08!33;CL:0000031!1.29e-08!33;CL:0000404!1.29e-08!33;CL:0000393!1.92e-07!39;CL:0000211!1.92e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,2.10e-09,23;CL:0000337,2.10e-09,23;CL:0000540,1.29e-08,33;CL:0000047,1.29e-08,33;CL:0000031,1.29e-08,33;CL:0000404,1.29e-08,33;CL:0000393,1.92e-07,39;CL:0000211,1.92e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000468!2.00e-07!333;UBERON:0000922!5.01e-07!328
|ontology_enrichment_uberon_v019_2=
|phase1_expression=46.7634633545998,47.4606554389531,45.4999239389536,62.9125559518207,82.6477954411473,53.0498499241572,62.1409623984098,35.8962839167582,43.3629264227134,39.5569049484169,44.5166717386313,48.0228397151925,22.0848941611255,27.1003247498892,26.3156711834374,23.8920815519995,16.7894850750755,40.2214260831753,43.8766187538364,47.5316410013794,36.0583550240536,44.7802189915993,54.5907559300375,49.7576434887495,42.2113077163593,47.6612530215467,53.8452495198843,42.2323616064343,41.8051522804023,47.8857246543868,45.4547546843375,47.6273005094723,53.5106365198576,31.6963362030877,30.0405684541326,41.2261920489061,30.421234083093,12.5559489221072,14.8453715459522,11.5175223674236,8.82347232046521,8.87959130445979,11.6522484727477,43.8120926555009,47.3430268795133,47.5386088098755,54.7673941043627,42.950955806948,37.3466510648602,40.4414190074509,41.1560079578566,23.0004102983955,37.7510863629907,39.8949178106239,35.6259427091012,54.0244815675489,48.9972182295274,50.5358650431893,103.788344420974,110.030123688583,97.6100361399516,73.5292634590017,61.3613409316686,44.9949858640699,58.3431153914515,49.0231279312809,46.7376172408711,39.1902671427986,63.7691115697138,67.0979513508503,66.4626877870367,102.263052416562,98.286500723468,56.5907492373088,67.5710570678566,53.3146896233812,56.1590993096882,56.437803433653,63.1322851683161,101.552441552249,100.910870893458,85.4297927713086,63.3745407733135,69.2198010338966,58.0633341551878,99.5844618900997,95.1042827738008,93.5725218043009,35.1369537065974,28.4904781602581,26.087803983151,52.4858564958646,54.39770669662,42.0968489477497,47.4336784736798,29.5697745484241,30.4764391685902,17.724753548118,25.718814455684,17.3136391510067,44.506520649431,25.6652954828636,48.4129955442627,99.5493384414664,40.483824669097,36.9905403593644,42.4640533812418,35.8537382317848,40.653247732606,42.0091253553454,71.9964106079464,52.6725277480004,54.4252573524298,48.2312449768392,49.2696682898603,40.4646424081555,65.0122765141403,24.2926919625452,30.0767587662957,53.0595267827502,31.5803371398363,31.5168914537894,37.2783522436244,37.1831612204665,38.9570874673026,40.1067576677488,23.9630249011841,31.1949420116572,26.9388881394897,50.4794454794253,48.0375632959558,58.0523106761434,37.0245802009549,51.6545223807268,43.4277013129481,51.1059978663437,77.907113345492,38.3173469479086,64.444303400587,19.1502088856691,91.8650327316688,76.78730288078,77.0665915566895,63.2960234910003,51.5716663567065,48.8113274285278,49.1934053938576,40.0990224645474,104.119340586563,90.9600245607211,87.4477087094826,85.9247271116093,78.6873715308442,64.0783986400786,59.4710374218957,97.7258250078802,49.1549231119264,39.1168818814367,32.110475431702,76.2222842930647,81.1460167534593,75.2659416907042,80.7299548345567,67.6868957211069,57.6959002198795,56.5057485743491,53.3864068785242,59.5503246072564,57.2668277698912,48.7577368314913,48.7223545370593,42.690396328197,49.3987759404864,40.3961320468719,37.8521907415429,65.9618565351213,22.1380584599145,54.2123661660266,91.7139477301506,75.2446816827821,76.8050069479676,62.3202091086128,64.0448766273227,50.2195652937156,41.758557415917,50.0684822360993,51.0210473864547,43.7704238490532,48.74102177978,52.1315257019448,31.9884313814547,32.6591688137162,87.6265702403237,76.8892489863475,76.6412602576947,61.5027010092849,55.2764588427733,52.8122723774099,47.8700586030628,42.659332766105,34.3827213972611,35.5383832094786,45.9501571985081,47.884545340519,40.8842709835462,41.1497665664282,42.1949052488086,39.3118770396439,40.4855104332458,43.7298128925232,36.804696477933,42.8315804573407,53.1942364151212,36.8419538191818,43.997311909153,41.4229359833263,44.4905585534342,35.2183770595258,24.756927482325,90.1979120027507,74.4749942340058,66.5400736238738,56.7950400858175,52.2619523218465,46.1804663318867,39.6121305151332,47.2905432318573,39.1992500678332,49.112068746506,29.3315333341171,31.6013516814589,28.2065664233948,33.1740824666399,52.7588513304148,33.9317348383135,48.2889306033282,54.5872005958493,60.7156536547612,44.426370197079,41.4052320615172,61.5241027861701,60.518005365979,47.6085708989486,56.1576675188497,51.466493713033,53.2183877883005,48.9820949026622,55.2363571452379,57.7120155801924,38.8798792870387,50.9564905897684,99.1825412426612,69.7156186033306,43.0572020958318,34.5137359683903,73.0769714826494,91.9063613172843,80.3457639760126,87.114058399828,70.0952137312155,52.4609435131489,54.5300594216258,58.822067433479,55.6224693967036,64.3053512307493,50.5364161916116,75.5775924773409,88.4099971693733,98.7006757262417,85.9491510476685,91.6849007930554,79.1957550153193,70.0978827765035,75.202842431306,108.653000833498,127.734738730884,66.3790478145435,29.6795255294664,39.5587845404969,43.5459317981285,42.3771821211134,44.6463247306567,39.9328746182896,52.2899351669637,34.3450470403684,57.7883230297023,31.6682641802207,19.4019510714832,25.4251263561107,26.3094899187501,21.2473037492319,25.7510672275531,25.428795180014,22.9120948323627,90.3139261674141,83.9709399233885,59.8349588152779,62.7264888043406,49.5683019703823,45.853877770839,43.1451038886254,33.5047605739558,30.2002887769877,35.4163408459548,43.9680492173668,91.653642724959,93.3185886178031,73.308098005706,72.071181500574,64.710196062968,61.7299075276666,68.2270976582299,68.2634332211378,41.794052902899,36.8678408010068,37.9213344753814,74.6028792267804,53.2042758113805,49.8895960234733,44.2195938298679,44.7033048257846,36.2990257550306,41.9438257175799,37.6604858306591,38.1796101341549,37.7089932411784,41.2246835529153,37.8112537646495,37.0499779915574,20.6324649089842,111.880920500529,92.3155584511505,107.110385240282,33.2286101735368,57.2431550126105,43.9563898241436,22.723048182381,55.6745035479253,49.6981621503019,42.8102469951675,44.1129545348335,43.994414679984,34.9392085083028,36.2589070747056,47.9265975164582,44.5817991191978,40.3296743995942,40.385304316642,108.35399087788,73.4205767057897,83.8302004252799,73.4182285546248,88.2471414663806,70.0443767194554,60.673356689841,62.8406924578627,58.4072961457104,56.3514782233268,54.2445701765113,54.7016390019621,52.8138102130137,48.467040370486,51.5196156531851,48.5819565108735,54.5815175200269,51.1209434228818,59.7524556164795,55.935589651071,65.4880272056143,59.9868224818561,59.1321751069356,51.8886707377413,58.912472139997,52.7149007165145,58.3540233464145,51.2985937303794,52.1487797168109,65.0925035122977,58.3684289170937,54.0789608241843,58.1108081300959,53.2982733679723,60.5726758480784,71.1960147123146,57.5471756775705,47.9162450527705,54.8997513037581,41.9123696327079,40.3450033979533
|short_description=p1@Ubfd1
}}

Revision as of 11:40, 14 September 2013

Short description:p1@Ubfd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ubfd1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000124733, ENSMUST00000133390, ENSMUST00000170688_5end
EntrezGene:Ubfd1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ubfd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G746.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I547.46
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I645.50
CD326+ enterocyte, pool1.CNhs13542.11848-124I362.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I482.65
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I753.05
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I862.14
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E935.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E743.36
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F239.56
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E644.52
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F148.02
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E422.08
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E827.10
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A126.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A323.89
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A516.79
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A240.22
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A443.88
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A647.53
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A336.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H244.78
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I954.59
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D149.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D242.21
GP2+ M cell, pool1.CNhs13228.11845-124H947.66
GP2+ M cell, pool2.CNhs13231.11846-124I153.85
GP2+ M cell, pool3.CNhs13240.11847-124I242.23
Ileum epithelium, pool1.CNhs13199.10252-104B941.81
Ileum epithelium, pool2.CNhs13232.10253-104C147.89
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C845.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I347.63
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G653.51
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F530.04
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F641.23
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F730.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G812.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H114.85
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H311.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G98.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H28.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H411.65
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D843.81
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D947.34
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B347.54
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B754.77
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C242.95
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B837.35
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C340.44
Mouse Astrocytes, donor2.CNhs12078.11552-120C441.16
Mouse Astrocytes, donor3.CNhs12107.11633-122C423.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A237.75
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I939.89
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A135.63
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C154.02
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E149.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C550.54
Mouse Granule cells, donor1.CNhs12131.11713-123C3103.79
Mouse Granule cells, donor2.CNhs12357.11731-123E3110.03
Mouse Granule cells, donor3.CNhs12108.11636-122C797.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C673.53
Mouse Meningeal cells, donor3.CNhs12109.11639-122D161.36
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C744.99
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E758.34
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D249.02
Mouse Microglia, donor1.CNhs12629.11718-123C846.74
Mouse Microglia, donor2.CNhs12634.11736-123E839.19
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D563.77
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F567.10
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D966.46
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1102.26
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D598.29
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D256.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F267.57
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D653.31
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D356.16
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F356.44
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D763.13
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4101.55
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4100.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D885.43
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E463.37
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E569.22
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I658.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D699.58
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F695.10
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E193.57
Mouse Schwann, donor1.CNhs12507.11728-123D935.14
Mouse Schwann, donor2.CNhs12573.11746-123F928.49
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G326.09
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F752.49
Mouse hepatocyte, donor1.CNhs13078.11714-123C454.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C842.10
Mouse hepatocyte, donor6.CNhs13090.11822-124F447.43
Mouse hepatocyte, donor8.CNhs13091.11824-124F629.57
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A730.48
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I717.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E325.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I817.31
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G644.51
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H125.67
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I848.41
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B699.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G140.48
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G236.99
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G342.46
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B635.85
accessory axillary lymph node, adult.CNhs10475.1063-29H940.65
adrenal gland, adult.CNhs10508.49-24D742.01
adrenal gland, embryo E14.CNhs11038.406-44C572.00
adrenal gland, embryo E16.CNhs11004.1254-43D652.67
adrenal gland, embryo E17.CNhs11043.1263-45I154.43
adrenal gland, embryo E18.CNhs11026.1262-18F548.23
adrenal gland, neonate N00.CNhs11191.1311-23C149.27
adrenal gland, neonate N25.CNhs11223.1377-27I340.46
amnion, adult pregnant day17.5.CNhs10488.583-22A865.01
aorta, adult.CNhs10498.46-23H124.29
bone (os femoris), adult.CNhs10483.56-12G230.08
bone (os femoris), neonate N02.CNhs11227.1985-43F553.06
bone (os femoris), neonate N16.CNhs11225.1525-43A631.58
bone (os femoris), neonate N20.CNhs11195.1350-25C331.52
cecum, adult.CNhs10467.37-13H437.28
cerebellum, adult.CNhs10494.15-8B237.18
cerebellum, neonate N30.CNhs11135.1395-42I238.96
colon, adult.CNhs10468.36-18H740.11
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C723.96
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D131.19
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D426.94
corpora quadrigemina, adult.CNhs10501.16-22A450.48
corpus striatum, adult.CNhs10487.19-21D848.04
corpus striatum, neonate N00.CNhs11226.630-43F158.05
cortex, adult.CNhs10473.12-14D537.02
cortex, neonate N30.CNhs11107.1392-42F251.65
diencephalon, adult.CNhs10482.20-12F243.43
diencephalon, neonate N30.CNhs11201.1388-42B251.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B177.91
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A238.32
epididymis, adult.CNhs10490.58-23B264.44
eyeball, adult.CNhs10484.31-12G419.15
eyeball, embryo E12.CNhs11016.345-16C691.87
eyeball, embryo E14.CNhs10521.399-16E276.79
eyeball, embryo E15.CNhs10593.426-16C977.07
eyeball, embryo E17.CNhs11023.1261-18D463.30
eyeball, neonate N00.CNhs11207.633-15C651.57
eyeball, neonate N01.CNhs11140.1532-43E748.81
eyeball, neonate N02.CNhs11205.1551-44G849.19
eyeball, neonate N16.CNhs11188.777-19A240.10
forelimb, embryo E11.CNhs10596.335-25E2104.12
forelimb, embryo E12.CNhs10600.359-14H290.96
forelimb, embryo E13.CNhs10589.384-1E287.45
forelimb, embryo E14.CNhs10577.413-26A885.92
forelimb, embryo E15.CNhs11007.437-20E778.69
forelimb, embryo E17.CNhs10598.1517-43C464.08
forelimb, embryo E18.CNhs11008.1520-43B559.47
gonad, embryo E13.CNhs11044.1564-45I697.73
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C849.15
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D239.12
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D532.11
heart, embryo E11.CNhs10586.331-24E976.22
heart, embryo E12.CNhs11015.353-12F581.15
heart, embryo E13.CNhs11013.376-3I975.27
heart, embryo E14.CNhs10597.403-26D480.73
heart, embryo E15.CNhs11017.431-16C867.69
heart, embryo E16.CNhs11021.457-17C657.70
heart, embryo E17.CNhs11025.479-18E556.51
heart, embryo E18.CNhs11030.1283-20G353.39
heart, neonate N00.CNhs11213.639-21E359.55
heart, neonate N03.CNhs11221.1349-25I257.27
heart, neonate N10.CNhs11118.749-24G148.76
heart, neonate N16.CNhs11209.782-15G148.72
heart, neonate N20.CNhs11127.821-26I642.69
heart, neonate N25.CNhs11196.1351-25D349.40
heart, neonate N30.CNhs11202.1390-42D240.40
hippocampus, adult.CNhs10478.13-16E837.85
hippocampus, neonate N00.CNhs11228.627-43G165.96
intestinal mucosa, adult.CNhs10506.860-29I322.14
intestine, adult.CNhs10496.178-9A354.21
intestine, embryo E12.CNhs11019.1251-16I591.71
intestine, embryo E13.CNhs11010.381-16D575.24
intestine, embryo E15.CNhs10602.976-16D876.81
intestine, embryo E16.CNhs10585.463-22H462.32
intestine, embryo E17.CNhs10582.482-18D364.04
intestine, embryo E18.CNhs10526.1289-20F750.22
intestine, neonate N00.CNhs11126.644-26D141.76
intestine, neonate N01.CNhs11192.1322-23E950.07
intestine, neonate N06.CNhs11102.688-20B851.02
intestine, neonate N07.CNhs11095.720-20F243.77
intestine, neonate N10.CNhs11098.755-23A548.74
intestine, neonate N20.CNhs11187.827-18D152.13
intestine, neonate N25.CNhs11121.1352-25E331.99
intestine, neonate N30.CNhs11131.1384-42G132.66
kidney, embryo E14.CNhs10606.411-4I987.63
kidney, embryo E15.CNhs10997.434-16F876.89
kidney, embryo E16.CNhs10584.464-22A576.64
kidney, embryo E17.CNhs11028.483-18I261.50
kidney, embryo E18.CNhs11001.1288-20C755.28
kidney, neonate N00.CNhs11214.646-21G752.81
kidney, neonate N10.CNhs11206.758-6D547.87
kidney, neonate N20.CNhs11113.832-19I142.66
kidney, neonate N25.CNhs11122.1353-25F334.38
kidney, neonate N30.CNhs11203.1385-42H135.54
liver, adult pregnant day01.CNhs10466.508-5B245.95
liver, embryo E12.CNhs10601.355-15F847.88
liver, embryo E13.CNhs10524.378-3H640.88
liver, embryo E14.CNhs10594.409-16E141.15
liver, embryo E15.CNhs10520.433-16D742.19
liver, embryo E16.CNhs10523.462-17F539.31
liver, embryo E17.CNhs10510.481-18A340.49
liver, embryo E18.CNhs10579.499-43G443.73
liver, neonate N00.CNhs11117.641-24F436.80
liver, neonate N03.CNhs11123.1345-25G242.83
liver, neonate N06.CNhs11101.684-20A853.19
liver, neonate N07.CNhs11103.716-20H236.84
liver, neonate N10.CNhs11115.751-24B944.00
liver, neonate N20.CNhs11220.823-25A341.42
liver, neonate N25.CNhs11198.1368-26H144.49
liver, neonate N30.CNhs11106.1382-42D135.22
lung, adult.CNhs10474.28-22B124.76
lung, embryo E12.CNhs10522.354-16G290.20
lung, embryo E14.CNhs10604.404-26F874.47
lung, embryo E15.CNhs11020.432-17C566.54
lung, embryo E16.CNhs10998.458-17B656.80
lung, embryo E17.CNhs10605.480-44A652.26
lung, embryo E18.CNhs10583.1287-20I646.18
lung, neonate N00.CNhs11224.640-42C639.61
lung, neonate N06.CNhs11212.683-20E547.29
lung, neonate N07.CNhs11111.715-19A339.20
lung, neonate N10.CNhs11219.750-23E649.11
lung, neonate N20.CNhs11109.822-18A429.33
lung, neonate N25.CNhs11119.1359-25C731.60
lung, neonate N30.CNhs11133.1394-42H228.21
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A133.17
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A152.76
mammary gland, adult lactating day02.CNhs10480.595-22B633.93
mammary gland, adult pregnant day19.CNhs10476.588-5H248.29
medulla oblongata, adult.CNhs10477.17-12C254.59
medulla oblongata, neonate N30.CNhs11200.1396-42A360.72
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C744.43
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C241.41
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E161.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E260.52
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E347.61
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D756.16
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D851.47
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D953.22
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D448.98
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D555.24
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D657.71
olfactory brain, adult.CNhs10489.18-22I938.88
ovary, adult.CNhs10507.91-2I750.96
ovary, embryo E18.CNhs11040.505-44H799.18
ovary, neonate N00.CNhs11217.1299-22I469.72
oviduct, adult pregnant day01.CNhs10500.988-6G643.06
pancreas, adult.CNhs10486.34-16E434.51
pancreas, embryo E14.CNhs11012.405-44F473.08
pancreas, embryo E15.CNhs11042.1556-45F291.91
pancreas, embryo E16.CNhs11003.460-26E580.35
pancreas, embryo E17.CNhs10599.1558-45G387.11
pancreas, embryo E18.CNhs10580.1535-43I770.10
pancreas, neonate N00.CNhs11105.645-26G952.46
pancreas, neonate N01.CNhs11138.1531-43D754.53
pancreas, neonate N02.CNhs11139.1539-43D858.82
pancreas, neonate N16.CNhs11136.787-43B655.62
pancreas, neonate N25.CNhs11094.1555-45E264.31
pancreas, neonate N30.CNhs11182.1548-44H550.54
pituitary gland, adult.CNhs10493.21-1G875.58
pituitary gland, embryo E12.CNhs11018.346-16E688.41
pituitary gland, embryo E13.CNhs11009.370-44C798.70
pituitary gland, embryo E14.CNhs11037.398-44A585.95
pituitary gland, embryo E15.CNhs10592.427-16B991.68
pituitary gland, embryo E16.CNhs11036.449-43F679.20
pituitary gland, embryo E17.CNhs11039.1265-44F570.10
pituitary gland, neonate N00.CNhs11190.1308-22E975.20
placenta, adult pregnant day10.CNhs10472.539-13I7108.65
placenta, adult pregnant day17.CNhs10464.577-18G3127.73
prostate, adult.CNhs10470.859-1F866.38
skin, adult.CNhs10492.30-1C329.68
skin, neonate N00.CNhs11124.650-25G439.56
skin, neonate N03.CNhs11215.662-22H343.55
skin, neonate N06.CNhs11097.693-20I542.38
skin, neonate N10.CNhs11108.762-6C444.65
small intestine, neonate N16.CNhs11114.790-21I139.93
spinal cord, adult.CNhs10505.24-13C952.29
spleen, adult.CNhs10465.25-2G234.35
spleen, embryo E16.CNhs11035.461-43C157.79
spleen, embryo E18.CNhs11011.1271-21F231.67
spleen, neonate N10.CNhs11116.752-24D119.40
spleen, neonate N20.CNhs11112.824-19H125.43
spleen, neonate N25.CNhs11099.1354-25G326.31
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C621.25
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C925.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D325.43
stomach, adult.CNhs10503.33-1H622.91
stomach, embryo E12.CNhs10588.356-43E390.31
stomach, embryo E15.CNhs10603.1252-16G883.97
stomach, embryo E16.CNhs11022.459-17D459.83
stomach, embryo E17.CNhs11006.1035-18D562.73
stomach, embryo E18.CNhs10999.1286-20C649.57
stomach, neonate N03.CNhs11193.1340-24B845.85
stomach, neonate N07.CNhs11210.718-18A943.15
stomach, neonate N25.CNhs11104.1355-25E433.50
stomach, neonate N30.CNhs11134.1386-42I130.20
submandibular gland, adult.CNhs10469.59-29C135.42
testis, adult.CNhs10504.57-7G543.97
testis, embryo E13.CNhs11031.389-23F591.65
testis, embryo E15.CNhs11034.443-27C593.32
testis, embryo E16.CNhs11033.470-26G573.31
testis, embryo E17.CNhs11029.486-18I572.07
testis, embryo E18.CNhs11027.503-18G564.71
testis, neonate N00.CNhs11189.1300-22B761.73
testis, neonate N07.CNhs11222.726-26I468.23
testis, neonate N10.CNhs11204.763-44D968.26
testis, neonate N20.CNhs11110.839-18H341.79
testis, neonate N30.CNhs11130.1391-42E236.87
thymus, adult.CNhs10471.38-12B537.92
thymus, embryo E14.CNhs11041.402-44I474.60
thymus, embryo E15.CNhs11005.430-45I253.20
thymus, embryo E16.CNhs11002.456-26C549.89
thymus, embryo E17.CNhs10581.478-18C144.22
thymus, embryo E18.CNhs10595.1273-19G444.70
thymus, neonate N02.CNhs11181.1541-43F836.30
thymus, neonate N03.CNhs11137.2104-43C741.94
thymus, neonate N06.CNhs11197.681-26C437.66
thymus, neonate N07.CNhs11211.713-19D338.18
thymus, neonate N10.CNhs11194.748-24E437.71
thymus, neonate N20.CNhs11186.820-7A241.22
thymus, neonate N25.CNhs11125.1362-25G737.81
thymus, neonate N30.CNhs11132.1393-42G237.05
tongue, adult.CNhs10499.32-1B420.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3111.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F792.32
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5107.11
urinary bladder, adult.CNhs10481.879-12E433.23
uterus, adult pregnant day19.CNhs10497.590-15F557.24
uterus, adult.CNhs10509.92-27E543.96
vagina, adult.CNhs10502.89-27D522.72
vesicular gland, adult.CNhs10491.51-27F855.67
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A149.70
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A242.81
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A344.11
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D743.99
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A434.94
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A536.26
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A647.93
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A744.58
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A840.33
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A940.39
whole body, embryo E11.CNhs11014.324-5I8108.35
whole body, embryo E12.CNhs10587.857-27C973.42
whole body, embryo E13.CNhs10512.372-23H283.83
whole body, embryo E14.5.CNhs10578.420-27D273.42
whole body, embryo E14.CNhs10519.395-14B188.25
whole body, embryo E16.CNhs10514.453-14F270.04
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G560.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G562.84
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G558.41
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G556.35
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G554.24
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G554.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G552.81
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G548.47
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G551.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G548.58
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G554.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G551.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G559.75
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G555.94
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G565.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G559.99
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G559.13
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G551.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G558.91
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G552.71
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G558.35
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G551.30
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G552.15
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G565.09
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G558.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G554.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G558.11
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G553.30
whole body, embryo E17.5.CNhs10513.490-9F960.57
whole body, embryo E17.CNhs10517.475-3I571.20
whole body, embryo E18.CNhs10516.493-3B357.55
whole body, neonate N00.CNhs10525.657-19C247.92
whole body, neonate N01.CNhs10576.659-23C654.90
whole body, neonate N06.CNhs10515.692-21D141.91
whole body, neonate N10.CNhs10518.761-6B440.35





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.10e-0923
neuroblast (sensu Vertebrata)2.10e-0923
neuron1.29e-0833
neuronal stem cell1.29e-0833
neuroblast1.29e-0833
electrically signaling cell1.29e-0833
electrically responsive cell1.92e-0739
electrically active cell1.92e-0739







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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