FFCP PHASE1:Mm9::chr7:139768043..139768054,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18242|HGNC=|UniProt=P29758,Q3TG75,Q3UKT3|association_with_transcript=26bp_to_ENSMUST00000084500,NM_016978,uc009kcb.1_5end|description=CAGE_peak_3_at_Oat_5end|id=chr7:139768043..139768054,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.58e-08,92|phase1_expression=2.5623815536767,1.39590163055744,0,0.60492842261366,1.00179145989269,0.671517087647559,2.10251376535973,1.67860320474049,0.703943610758334,0.936258105287974,0.68487187290202,1.19658238493005,1.19840510951844,1.57356724354195,1.66554880907831,1.82227740650843,2.79824751251259,1.57731082679119,1.91960207048034,2.12194825899015,2.72138528483423,3.07801948722744,4.17919662622297,2.71987118748791,1.37645568640302,0.57423196411502,1.29228598847722,1.72376986148711,1.52018735565099,0.504060259519861,1.10865255327652,4.44521471421742,4.92051830067656,0,1.44425809875637,1.16364251750945,0.612508068787107,1.25559489221072,3.1253413780952,1.0470474879476,1.76469446409304,0,1.45653105909346,9.19046771221714,11.3542162965856,6.60768307782054,1.56478268869608,4.36050312760893,4.83309602015838,5.8328969722285,7.13930750289349,2.87505128729943,1.00669563634642,1.45072428402269,2.01656279485478,5.91696702882678,10.3152038377952,6.18806510732931,1.41621522601718,5.28990979272033,2.53532561402472,3.72728985276045,4.4464739805557,1.7997994345628,3.9554654502679,5.6838409195688,1.49800055259202,1.15265491596466,3.21437798156281,3.24014251996058,3.78584930432488,6.85562362569129,3.53389665522582,3.1847607795888,2.97120960156533,2.75765635983006,6.60695285996332,4.59674417106676,5.9906547969935,2.1101806036831,3.93396867490361,2.08365348222704,5.02529398202486,10.1297269805702,4.5839474333043,4.71405736757868,4.6982654663704,3.91438836233131,2.19605960666234,4.83657984683427,0.579728977403356,0.860423876981386,0.679971333707751,0,0.649776417447669,0.448026887097336,1.96622188184453,7.83979483859066,8.83272415649754,12.3668851078619,3.94361575374705,8.98285341900225,0,0,3.68034769719064,5.32055717497707,2.02209778005913,1.02765491747154,2.58937883647172,3.85949561568544,5.55153045651635,3.95805121805784,3.68984795609694,5.27529241934179,6.58496759959947,4.14699751387929,2.71914464507811,4.04878199375753,2.65383165584962,4.85300549842228,3.09178125844551,6.30337829075789,0,4.39171195517321,2.93225389538837,3.83185582812887,1.7972268675888,3.59941638596045,2.79554499560742,5.09288173976397,1.83000241127451,2.38743269014442,5.04090528557602,2.55715457330331,5.40248915854856,4.86723789203273,6.51771928642024,4.10543003013307,3.0326731012041,1.26265113531884,2.34216797332867,3.21862946206862,3.42118046630164,3.61691562805716,2.51735046859913,3.84341160854549,2.99845518591132,3.88055056108524,3.88022387279116,3.9712276835242,3.87092473160687,4.16471891612392,4.44875598760957,4.87553033131033,5.14455341019859,4.37875387000685,5.61770549850588,3.86021860672073,3.12579849335152,5.17814431338755,6.3322036194896,5.22179978236943,3.78791576936336,4.9191057936851,5.707883176833,5.11574678450897,3.48755421819505,5.7215017759913,3.78487654801005,4.26835406605648,3.72916523910936,5.55559952216263,3.73235195994786,4.2946054003319,3.78521907415429,4.93942139420565,1.65209391491899,2.64450566663544,5.75878276445132,6.96710015581316,2.44848176511977,2.42020229548011,1.11189021922435,2.66315876557583,1.42358718463353,1.81168850196412,3.77002813200404,2.98434708061726,1.9496408711912,1.79763881730844,3.45820879799511,1.7922714592893,4.74169752382704,3.65595240351132,0,2.24016460629846,2.71533482034676,2.94570443539338,3.73095569033118,2.65698266363284,3.45397201251025,3.57851775373222,1.48226313543574,1.33476084572875,2.75182593158484,2.24862112384854,2.23146133527353,2.17059443777175,3.05551022137704,1.15078454980324,2.59416362840057,1.92192989231657,0,3.34926852901653,0.624075346229121,1.76805214562978,0.896987067609561,0.964887042726734,4.61882975416512,3.41084541186873,5.70377417547091,6.78980343100753,5.16318546234705,3.51763140627813,2.85652369063216,3.31727201358258,4.09851374676097,4.20782910332672,4.30527875375215,4.58817281204066,6.21665934717224,3.90552458170081,3.01582567878545,10.3342079925555,1.96705709207614,4.69092468718045,5.13761887960934,5.74337264301796,5.57378814280696,5.04941854408746,1.26203287766503,2.34263246577983,3.66219776145758,2.38968797952552,2.45078541490634,2.83076530788832,2.42886421004937,3.21481443702443,5.13874111330481,3.85585579706168,4.40014264145633,7.30068975035746,7.00413925220377,3.95928295134085,5.30980553359851,6.06951590387454,2.11626489875326,4.71512699389745,3.54362271456927,4.91896236710284,1.55056975900933,3.99887102425256,3.92147116223193,4.10847785316561,3.16255825724996,2.06271086496374,6.12791290356818,1.44048875225048,4.01011919726539,4.50107773566344,4.61084607469911,5.35106452806212,4.93647061806363,5.17590413494819,3.98941903708308,2.96564899209348,4.851624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| ||
|EntrezGene=18242 | |||
|HGNC= | |||
|UniProt=P29758,Q3TG75,Q3UKT3 | |||
|association_with_transcript=26bp_to_ENSMUST00000084500,NM_016978,uc009kcb.1_5end | |||
|description=CAGE_peak_3_at_Oat_5end | |||
|id=chr7:139768043..139768054,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.58e-08,92 | |||
|phase1_expression=2.5623815536767,1.39590163055744,0,0.60492842261366,1.00179145989269,0.671517087647559,2.10251376535973,1.67860320474049,0.703943610758334,0.936258105287974,0.68487187290202,1.19658238493005,1.19840510951844,1.57356724354195,1.66554880907831,1.82227740650843,2.79824751251259,1.57731082679119,1.91960207048034,2.12194825899015,2.72138528483423,3.07801948722744,4.17919662622297,2.71987118748791,1.37645568640302,0.57423196411502,1.29228598847722,1.72376986148711,1.52018735565099,0.504060259519861,1.10865255327652,4.44521471421742,4.92051830067656,0,1.44425809875637,1.16364251750945,0.612508068787107,1.25559489221072,3.1253413780952,1.0470474879476,1.76469446409304,0,1.45653105909346,9.19046771221714,11.3542162965856,6.60768307782054,1.56478268869608,4.36050312760893,4.83309602015838,5.8328969722285,7.13930750289349,2.87505128729943,1.00669563634642,1.45072428402269,2.01656279485478,5.91696702882678,10.3152038377952,6.18806510732931,1.41621522601718,5.28990979272033,2.53532561402472,3.72728985276045,4.4464739805557,1.7997994345628,3.9554654502679,5.6838409195688,1.49800055259202,1.15265491596466,3.21437798156281,3.24014251996058,3.78584930432488,6.85562362569129,3.53389665522582,3.1847607795888,2.97120960156533,2.75765635983006,6.60695285996332,4.59674417106676,5.9906547969935,2.1101806036831,3.93396867490361,2.08365348222704,5.02529398202486,10.1297269805702,4.5839474333043,4.71405736757868,4.6982654663704,3.91438836233131,2.19605960666234,4.83657984683427,0.579728977403356,0.860423876981386,0.679971333707751,0,0.649776417447669,0.448026887097336,1.96622188184453,7.83979483859066,8.83272415649754,12.3668851078619,3.94361575374705,8.98285341900225,0,0,3.68034769719064,5.32055717497707,2.02209778005913,1.02765491747154,2.58937883647172,3.85949561568544,5.55153045651635,3.95805121805784,3.68984795609694,5.27529241934179,6.58496759959947,4.14699751387929,2.71914464507811,4.04878199375753,2.65383165584962,4.85300549842228,3.09178125844551,6.30337829075789,0,4.39171195517321,2.93225389538837,3.83185582812887,1.7972268675888,3.59941638596045,2.79554499560742,5.09288173976397,1.83000241127451,2.38743269014442,5.04090528557602,2.55715457330331,5.40248915854856,4.86723789203273,6.51771928642024,4.10543003013307,3.0326731012041,1.26265113531884,2.34216797332867,3.21862946206862,3.42118046630164,3.61691562805716,2.51735046859913,3.84341160854549,2.99845518591132,3.88055056108524,3.88022387279116,3.9712276835242,3.87092473160687,4.16471891612392,4.44875598760957,4.87553033131033,5.14455341019859,4.37875387000685,5.61770549850588,3.86021860672073,3.12579849335152,5.17814431338755,6.3322036194896,5.22179978236943,3.78791576936336,4.9191057936851,5.707883176833,5.11574678450897,3.48755421819505,5.7215017759913,3.78487654801005,4.26835406605648,3.72916523910936,5.55559952216263,3.73235195994786,4.2946054003319,3.78521907415429,4.93942139420565,1.65209391491899,2.64450566663544,5.75878276445132,6.96710015581316,2.44848176511977,2.42020229548011,1.11189021922435,2.66315876557583,1.42358718463353,1.81168850196412,3.77002813200404,2.98434708061726,1.9496408711912,1.79763881730844,3.45820879799511,1.7922714592893,4.74169752382704,3.65595240351132,0,2.24016460629846,2.71533482034676,2.94570443539338,3.73095569033118,2.65698266363284,3.45397201251025,3.57851775373222,1.48226313543574,1.33476084572875,2.75182593158484,2.24862112384854,2.23146133527353,2.17059443777175,3.05551022137704,1.15078454980324,2.59416362840057,1.92192989231657,0,3.34926852901653,0.624075346229121,1.76805214562978,0.896987067609561,0.964887042726734,4.61882975416512,3.41084541186873,5.70377417547091,6.78980343100753,5.16318546234705,3.51763140627813,2.85652369063216,3.31727201358258,4.09851374676097,4.20782910332672,4.30527875375215,4.58817281204066,6.21665934717224,3.90552458170081,3.01582567878545,10.3342079925555,1.96705709207614,4.69092468718045,5.13761887960934,5.74337264301796,5.57378814280696,5.04941854408746,1.26203287766503,2.34263246577983,3.66219776145758,2.38968797952552,2.45078541490634,2.83076530788832,2.42886421004937,3.21481443702443,5.13874111330481,3.85585579706168,4.40014264145633,7.30068975035746,7.00413925220377,3.95928295134085,5.30980553359851,6.06951590387454,2.11626489875326,4.71512699389745,3.54362271456927,4.91896236710284,1.55056975900933,3.99887102425256,3.92147116223193,4.10847785316561,3.16255825724996,2.06271086496374,6.12791290356818,1.44048875225048,4.01011919726539,4.50107773566344,4.61084607469911,5.35106452806212,4.93647061806363,5.17590413494819,3.98941903708308,2.96564899209348,4.85162475720916,0.49465875882444,4.19807509409354,4.04096597018644,4.65552141612232,2.46211349617592,3.49777003955821,7.23158677840988,3.2465467351592,3.714963623338,6.11141940320049,3.76736914009382,2.05041341581538,3.20289442489132,2.54967644990783,2.51912614182584,2.62579950228405,3.81868247206045,2.68885594543965,3.86306987541013,4.53622431451565,5.01811910434725,5.24070152990826,6.47348862647139,5.12451425497083,3.14107130380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| |||
|short_description=p3@Oat | |||
}} | |||
Revision as of 12:05, 14 September 2013
| Short description: | p3@Oat |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Oat_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 26bp_to_ENSMUST00000084500, NM_016978, uc009kcb.1_5end |
| EntrezGene: | Oat |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| structure with developmental contribution from neural crest | 4.58e-08 | 92 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
