FFCP PHASE1:Mm9::chr8:42324927..42325013,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18536|HGNC=|UniProt=E9QMG0,Q9R0L6,B2RSW8|association_with_transcript=-99bp_to_ENSMUST00000045199,ENSMUST00000045218,NM_023662,uc009lnq.2,uc009lnr.2_5end|description=CAGE_peak_2_at_Pcm1_5end|id=chr8:42324927..42325013,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.15e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.15e-07,51|phase1_expression=6.08565618998217,6.63053274514786,6.82498859084304,10.2837831844322,12.5223932486587,8.39396359559449,7.70921713965235,13.0414556675992,11.1223090499817,3.27690336850791,8.38968044304974,2.79202556483677,35.4385510957596,13.2004807652686,13.3243904726265,19.6401009368131,9.79386629379405,29.9689057090326,33.8672651006175,34.3755617956405,10.6304112688837,8.73760370567791,7.05239430675126,5.43974237497583,2.98232065387321,7.46501553349526,7.32295393470427,6.67960821326256,6.08074942260396,9.32511480111744,3.76941868114018,3.81018404075779,1.84519436275371,0,18.7753552838328,14.1299448554718,17.150225926039,20.9265815368454,15.626706890476,29.8408534065065,13.5293242247133,23.9065919735456,20.3914348273085,9.56815816614387,7.80602370390262,4.03802854755699,2.34717403304412,0.436050312760893,0,1.94429899074283,0.279972843250725,0,28.019695211642,31.9159342484992,25.8792225339697,2.57259436035947,7.16333599846892,4.12537673821954,2.63011399117477,0.528990979272033,1.26766280701236,0.677689064138264,0.889294796111139,0.899899717281399,0.988866362566974,1.4209602298922,1.49800055259202,1.53687322128622,6.0139975138917,4.18518408828241,3.78584930432488,3.71346279724945,3.09215957332259,5.63457676388789,3.35459148563827,7.35375029288017,18.7196997698961,16.0886045987337,17.8183578577242,1.45074916503213,3.20206752608434,3.12548022334056,8.93385596804419,7.31591393041184,13.9046405476897,7.36571463684169,8.96941589034349,3.16879057903011,3.86203585999239,4.30757892608677,33.9141451780963,9.46466264679525,0.679971333707751,4.85732872474035,9.74664626171504,6.72040330646003,8.00533194750986,6.13549161281008,6.23486411046885,2.82671659608272,5.91542363062058,10.2661181931454,2.54805239706646,0,5.62876706629157,4.81383744402687,5.05524445014783,7.76450382089608,36.251303710604,23.4538579722423,9.71517829890361,9.43842982767638,12.9144678463393,14.6200961336044,16.2272415847273,18.0959891514733,25.9554716121093,30.3658649531814,21.230653246797,27.662131341007,26.7218237337076,25.6983884161668,37.2783522436244,55.9211322292055,38.5381940536757,23.5020490791904,8.98613433794402,6.59893004092748,6.22644112658017,36.0995440965623,35.6850470198529,14.1989417887537,24.509229147111,19.4343747571051,31.3759947284936,24.4984307232314,13.2391173005411,20.4027431800553,15.9215337813215,39.3526270507706,13.5325260681212,10.3455946995063,17.8261508507296,24.1127708537144,18.6420007674638,24.3416068541215,23.5191328644919,38.8055056108524,5.82033580918674,17.9650776159428,13.1963343122962,10.5213951565236,18.9072129473407,27.163668988729,30.0441919155597,17.7140497468459,6.31991868581911,10.2939162845886,7.10408748488982,14.7059298500206,17.12040237862,21.6074473753218,28.17262353464,25.3825858954151,26.5339434166291,28.1366073147993,25.7542465343634,15.880086561935,24.5194176371086,25.774291860418,30.9682852465169,30.7019973593198,29.4197154490008,27.780728683397,25.2347938276953,11.1136981369627,20.1555457620117,9.25576983322405,12.797295032114,16.953277045812,21.9074684247559,26.4205417256579,26.9077433052293,24.5391057685201,21.8283368310475,24.2107463444296,23.1228392096248,24.8695590051439,28.6597208065107,34.1551375288604,20.9653908378453,26.2866480695765,2.84501851429623,13.3670759753383,11.270773567308,21.1797380959127,19.0073437424273,11.4321386421219,26.4328725179395,28.4887585600632,21.6658244421097,19.4967518996445,13.0439155918346,18.1861165230543,13.7591296579242,14.6160373050155,15.0116489827492,14.2294524253926,12.731292589071,17.5494643844994,7.13394997810156,10.9824565275233,56.0696005456683,13.0249331683976,10.9213185590096,12.1237861414614,12.7372163600558,11.5786445127208,35.6573657021547,10.8010104709176,14.0149879740142,15.1073126339917,20.8874320976767,27.9735449927832,31.6598042378398,27.5138443479496,31.5270288212382,20.1532867580385,32.8476823434423,39.8187854759243,37.4726410648993,31.8227928879325,10.5553898757491,1.63171705145613,25.0799779239708,23.4546234359023,43.0275581167282,35.5151410374376,4.09837363441689,32.0638077549554,3.47059041357882,2.73307121007647,6.03185513651837,5.01834475700359,5.56996685205985,6.51076020814315,7.2865926301481,4.9683495844923,5.92931666919785,28.276275845119,23.2781739741561,10.1497394090335,10.2618784392753,28.3748611512761,34.5137359683903,11.6534705354391,10.883648050731,19.9921384541252,8.26845300066164,23.3650712437385,19.898978573953,21.4484900391728,23.5288269733916,29.0753817300951,21.0837217149998,28.8779521094923,34.7248397868864,12.784337676223,2.97524972700335,12.2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| ||
|EntrezGene=18536 | |||
|HGNC= | |||
|UniProt=E9QMG0,Q9R0L6,B2RSW8 | |||
|association_with_transcript=-99bp_to_ENSMUST00000045199,ENSMUST00000045218,NM_023662,uc009lnq.2,uc009lnr.2_5end | |||
|description=CAGE_peak_2_at_Pcm1_5end | |||
|id=chr8:42324927..42325013,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.15e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.15e-07,51 | |||
|phase1_expression=6.08565618998217,6.63053274514786,6.82498859084304,10.2837831844322,12.5223932486587,8.39396359559449,7.70921713965235,13.0414556675992,11.1223090499817,3.27690336850791,8.38968044304974,2.79202556483677,35.4385510957596,13.2004807652686,13.3243904726265,19.6401009368131,9.79386629379405,29.9689057090326,33.8672651006175,34.3755617956405,10.6304112688837,8.73760370567791,7.05239430675126,5.43974237497583,2.98232065387321,7.46501553349526,7.32295393470427,6.67960821326256,6.08074942260396,9.32511480111744,3.76941868114018,3.81018404075779,1.84519436275371,0,18.7753552838328,14.1299448554718,17.150225926039,20.9265815368454,15.626706890476,29.8408534065065,13.5293242247133,23.9065919735456,20.3914348273085,9.56815816614387,7.80602370390262,4.03802854755699,2.34717403304412,0.436050312760893,0,1.94429899074283,0.279972843250725,0,28.019695211642,31.9159342484992,25.8792225339697,2.57259436035947,7.16333599846892,4.12537673821954,2.63011399117477,0.528990979272033,1.26766280701236,0.677689064138264,0.889294796111139,0.899899717281399,0.988866362566974,1.4209602298922,1.49800055259202,1.53687322128622,6.0139975138917,4.18518408828241,3.78584930432488,3.71346279724945,3.09215957332259,5.63457676388789,3.35459148563827,7.35375029288017,18.7196997698961,16.0886045987337,17.8183578577242,1.45074916503213,3.20206752608434,3.12548022334056,8.93385596804419,7.31591393041184,13.9046405476897,7.36571463684169,8.96941589034349,3.16879057903011,3.86203585999239,4.30757892608677,33.9141451780963,9.46466264679525,0.679971333707751,4.85732872474035,9.74664626171504,6.72040330646003,8.00533194750986,6.13549161281008,6.23486411046885,2.82671659608272,5.91542363062058,10.2661181931454,2.54805239706646,0,5.62876706629157,4.81383744402687,5.05524445014783,7.76450382089608,36.251303710604,23.4538579722423,9.71517829890361,9.43842982767638,12.9144678463393,14.6200961336044,16.2272415847273,18.0959891514733,25.9554716121093,30.3658649531814,21.230653246797,27.662131341007,26.7218237337076,25.6983884161668,37.2783522436244,55.9211322292055,38.5381940536757,23.5020490791904,8.98613433794402,6.59893004092748,6.22644112658017,36.0995440965623,35.6850470198529,14.1989417887537,24.509229147111,19.4343747571051,31.3759947284936,24.4984307232314,13.2391173005411,20.4027431800553,15.9215337813215,39.3526270507706,13.5325260681212,10.3455946995063,17.8261508507296,24.1127708537144,18.6420007674638,24.3416068541215,23.5191328644919,38.8055056108524,5.82033580918674,17.9650776159428,13.1963343122962,10.5213951565236,18.9072129473407,27.163668988729,30.0441919155597,17.7140497468459,6.31991868581911,10.2939162845886,7.10408748488982,14.7059298500206,17.12040237862,21.6074473753218,28.17262353464,25.3825858954151,26.5339434166291,28.1366073147993,25.7542465343634,15.880086561935,24.5194176371086,25.774291860418,30.9682852465169,30.7019973593198,29.4197154490008,27.780728683397,25.2347938276953,11.1136981369627,20.1555457620117,9.25576983322405,12.797295032114,16.953277045812,21.9074684247559,26.4205417256579,26.9077433052293,24.5391057685201,21.8283368310475,24.2107463444296,23.1228392096248,24.8695590051439,28.6597208065107,34.1551375288604,20.9653908378453,26.2866480695765,2.84501851429623,13.3670759753383,11.270773567308,21.1797380959127,19.0073437424273,11.4321386421219,26.4328725179395,28.4887585600632,21.6658244421097,19.4967518996445,13.0439155918346,18.1861165230543,13.7591296579242,14.6160373050155,15.0116489827492,14.2294524253926,12.731292589071,17.5494643844994,7.13394997810156,10.9824565275233,56.0696005456683,13.0249331683976,10.9213185590096,12.1237861414614,12.7372163600558,11.5786445127208,35.6573657021547,10.8010104709176,14.0149879740142,15.1073126339917,20.8874320976767,27.9735449927832,31.6598042378398,27.5138443479496,31.5270288212382,20.1532867580385,32.8476823434423,39.8187854759243,37.4726410648993,31.8227928879325,10.5553898757491,1.63171705145613,25.0799779239708,23.4546234359023,43.0275581167282,35.5151410374376,4.09837363441689,32.0638077549554,3.47059041357882,2.73307121007647,6.03185513651837,5.01834475700359,5.56996685205985,6.51076020814315,7.2865926301481,4.9683495844923,5.92931666919785,28.276275845119,23.2781739741561,10.1497394090335,10.2618784392753,28.3748611512761,34.5137359683903,11.6534705354391,10.883648050731,19.9921384541252,8.26845300066164,23.3650712437385,19.898978573953,21.4484900391728,23.5288269733916,29.0753817300951,21.0837217149998,28.8779521094923,34.7248397868864,12.784337676223,2.97524972700335,12.2172109968008,16.6699819623737,15.8748247665843,17.2776471632227,6.08929898229199,20.6511103096065,19.9122146611991,28.668691747145,45.5086058118485,23.7352707242981,32.1467889867071,30.3205753767967,32.6640390492672,24.4843902769075,40.9789917443226,18.6249260069659,14.0343070214991,20.9269815927774,19.2135826144785,23.1013244848533,18.0734756833153,8.66889992968662,11.47601909054,10.0885980877229,11.4560474161814,10.9135917785492,20.3319467126849,22.5731162317565,26.97239018586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| |||
|short_description=p2@Pcm1 | |||
}} | |||
Revision as of 15:39, 14 September 2013
| Short description: | p2@Pcm1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Pcm1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -99bp_to_ENSMUST00000045199, ENSMUST00000045218, NM_023662, uc009lnq.2, uc009lnr.2_5end |
| EntrezGene: | Pcm1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 1.15e-07 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
