FFCP PHASE1:Mm9::chr8:87396004..87396011,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=71846|HGNC=|MCL_coexpression_id=0|UniProt=Q505B8,E9PYH4,A2RTK0|association_with_transcript=0bp_to_ENSMUST00000136026,ENSMUST00000170296,NM_001168246,NM_027954,NR_031759,uc009mnv.2,uc012ghl.1,uc012ghm.1_5end|description=CAGE_peak_2_at_Syce2_5end|id=chr8:87396004..87396011,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001301!2.04e-15!3;UBERON:0006555!2.04e-15!3;UBERON:0005103!2.04e-15!3;UBERON:0000083!2.04e-15!3;UBERON:0009201!2.04e-15!3;UBERON:0004819!2.04e-15!3;UBERON:0006553!2.04e-15!3;UBERON:0003074!2.04e-15!3;UBERON:0003060!2.04e-15!3;UBERON:0003135!3.35e-12!15;UBERON:0000080!8.11e-12!4;UBERON:0005904!8.11e-12!4;UBERON:0006947!8.11e-12!4;UBERON:0002120!8.11e-12!4;UBERON:0004054!8.11e-12!4;UBERON:0004875!8.11e-12!4;UBERON:0004876!8.11e-12!4;UBERON:0005721!8.11e-12!4;UBERON:0005754!8.11e-12!4;UBERON:0007297!8.11e-12!4;UBERON:0003101!1.82e-11!16;UBERON:0000079!1.82e-11!16;UBERON:0000058!3.41e-08!6;UBERON:0003133!9.03e-08!24;UBERON:0000473!9.23e-08!14;UBERON:0005156!3.37e-07!26;UBERON:0000990!3.37e-07!26|ontology_enrichment_uberon_v019_2=UBERON:0003135,1.51e-09,15;UBERON:0003101,5.40e-09,16;UBERON:0000079,5.40e-09,16|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9060606211498,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,2.0217820674694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,71.5890032128922,0,0,0,0,0,0,0,0,0,11.2331702440568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@Syce2}} | ||
|EntrezGene=71846 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=Q505B8,E9PYH4,A2RTK0 | |||
|association_with_transcript=0bp_to_ENSMUST00000136026,ENSMUST00000170296,NM_001168246,NM_027954,NR_031759,uc009mnv.2,uc012ghl.1,uc012ghm.1_5end | |||
|description=CAGE_peak_2_at_Syce2_5end | |||
|id=chr8:87396004..87396011,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!2.04e-15!3;UBERON:0006555!2.04e-15!3;UBERON:0005103!2.04e-15!3;UBERON:0000083!2.04e-15!3;UBERON:0009201!2.04e-15!3;UBERON:0004819!2.04e-15!3;UBERON:0006553!2.04e-15!3;UBERON:0003074!2.04e-15!3;UBERON:0003060!2.04e-15!3;UBERON:0003135!3.35e-12!15;UBERON:0000080!8.11e-12!4;UBERON:0005904!8.11e-12!4;UBERON:0006947!8.11e-12!4;UBERON:0002120!8.11e-12!4;UBERON:0004054!8.11e-12!4;UBERON:0004875!8.11e-12!4;UBERON:0004876!8.11e-12!4;UBERON:0005721!8.11e-12!4;UBERON:0005754!8.11e-12!4;UBERON:0007297!8.11e-12!4;UBERON:0003101!1.82e-11!16;UBERON:0000079!1.82e-11!16;UBERON:0000058!3.41e-08!6;UBERON:0003133!9.03e-08!24;UBERON:0000473!9.23e-08!14;UBERON:0005156!3.37e-07!26;UBERON:0000990!3.37e-07!26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,1.51e-09,15;UBERON:0003101,5.40e-09,16;UBERON:0000079,5.40e-09,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9060606211498,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,2.0217820674694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,71.5890032128922,0,0,0,0,0,0,0,0,0,11.2331702440568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@Syce2 | |||
}} |
Revision as of 16:19, 14 September 2013
Short description: | p2@Syce2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Syce2_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000136026, ENSMUST00000170296, NM_001168246, NM_027954, NR_031759, uc009mnv.2, uc012ghl.1, uc012ghm.1_5end |
EntrezGene: | Syce2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 1.51e-09 | 15 |
male organism | 5.40e-09 | 16 |
male reproductive system | 5.40e-09 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.