FFCP PHASE1:Mm9::chr9:118387300..118387317,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=13813|HGNC=|MCL_coexpression_id=1850|UniProt=O54839|association_with_transcript=0bp_to_NM_001164789,NM_010136,uc009rzo.2,uc009rzp.2,uc009rzq.2_5end|description=CAGE_peak_1_at_Eomes_5end|id=chr9:118387300..118387317,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002609,6.50e-09,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!8.72e-08!94;UBERON:0003056!6.39e-07!49|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,2.7115897922731,0.985521055061667,0.936258105287974,2.05461561870606,1.51567102091139,1.19840510951844,0.437102012094987,0,0.404950534779652,0,2.68142840554502,1.37114433605739,0.42438965179803,0.935476191661768,1.09220046320974,0.522399578277871,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.872100625521786,0,0,0,0,0,4.35217285206807,18.1490651536931,0,0,0,2.02316460859598,5.28990979272033,3.1691570175309,0,0,0,0,0,0,0,134.900185613329,147.831502473201,152.695921941103,0,0,21.0684174649721,20.9901581529938,27.5765635983006,0,0.127687338085188,0,6.19865552331911,3.84248103130121,17.7110545989298,1.11673199600552,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.1418387971906,2.58937883647172,0,0,0,0,0,0,0,0.247194967734374,0.144599356919912,0.884610551949874,0,0.220841518460394,0.484875253135222,0,8.49064311333487,4.1889341362691,0.255457055208591,0,0,0.127070227073065,0,0,1.38219787324151,0,0,0.62336413367868,0.486723789203273,0,0.746441823660558,0.252722758433675,0.420883711772948,0.130120442962704,2.06911893990126,6.84236093260327,6.78171680260718,5.91917542616552,7.30248205623644,5.05989312622536,2.32833033665114,0.862271971731369,3.78212160335639,0.703804496655795,0.219195732427575,1.39023624612799,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0.630869845692382,37.0456604565424,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0.372140947668503,0,0,0,0,1.29327233116623,0,0,0,0,0,0,0,0.315270288212382,0,0.318909537314974,1.14704320301017,0.518054945597687,0.578596234326046,0,0,0.491764273019036,0,0,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,40.8078071855695,0.425820255624806,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08036656418786,1.55230420539305,0.643011105094777,0.177340233642274,0.356737635204141,0.822745103010605,0.304464949114599,2.81606049676452,0.21183207086382,0,0,0,0,0,0,0.291480836629851,0,3.2465467351592,0,0.370389054739423,1.31857919903284,1.36694227721025,2.0590035588587,0,0.139951452323658,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.2604087696879,0.104859344425711,0,0,0,0.202725215290164,0.410843828659309,0,0.179026695667481,0.596044064343795,0.120195449519969,0.147689527174577,0.100966449948148,0.15241361331,0,0.584747284438515,0.192423683280659,0,0,40.1794575607057,123.535980551248,30.2192309455341,0.19318959403219,4.50437941082837,0.36630324853453,0,0,0,0.460325236507177,0.572895513439397,0.171853182343688,0,0,0,0,0,0,2.28332164685189,3.59122386060928,6.65861062441123,5.83456120963906,6.07878171621149,3.67687016900028,2.00022055021454,1.85431551515005,2.24643446714271,1.26348605881899,2.02783439912192,1.32038438970253,2.52832070168682,1.72867911493147,2.23998328926892,1.90517476513229,1.97003354106254,2.12200142510076,1.64834360321323,1.32479028120958,1.71434626192708,1.24233064311536,2.14592570952589,2.18019624948493,1.59985946706062,3.21535509988371,0.914639864363863,2.36762740294059,3.39510284614654,1.68342681497322,1.42362021749009,2.9551344712669,0.818462086339379,1.23949472948773,2.12197272079256,4.74640098082097,0.701794825336225,1.28922632428979,0,0.220591419119515,0.231867835620421|short_description=p1@Eomes}} | ||
|EntrezGene=13813 | |||
|HGNC= | |||
|MCL_coexpression_id=1850 | |||
|UniProt=O54839 | |||
|association_with_transcript=0bp_to_NM_001164789,NM_010136,uc009rzo.2,uc009rzp.2,uc009rzq.2_5end | |||
|description=CAGE_peak_1_at_Eomes_5end | |||
|id=chr9:118387300..118387317,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,6.50e-09,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!8.72e-08!94;UBERON:0003056!6.39e-07!49 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,2.7115897922731,0.985521055061667,0.936258105287974,2.05461561870606,1.51567102091139,1.19840510951844,0.437102012094987,0,0.404950534779652,0,2.68142840554502,1.37114433605739,0.42438965179803,0.935476191661768,1.09220046320974,0.522399578277871,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.872100625521786,0,0,0,0,0,4.35217285206807,18.1490651536931,0,0,0,2.02316460859598,5.28990979272033,3.1691570175309,0,0,0,0,0,0,0,134.900185613329,147.831502473201,152.695921941103,0,0,21.0684174649721,20.9901581529938,27.5765635983006,0,0.127687338085188,0,6.19865552331911,3.84248103130121,17.7110545989298,1.11673199600552,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.1418387971906,2.58937883647172,0,0,0,0,0,0,0,0.247194967734374,0.144599356919912,0.884610551949874,0,0.220841518460394,0.484875253135222,0,8.49064311333487,4.1889341362691,0.255457055208591,0,0,0.127070227073065,0,0,1.38219787324151,0,0,0.62336413367868,0.486723789203273,0,0.746441823660558,0.252722758433675,0.420883711772948,0.130120442962704,2.06911893990126,6.84236093260327,6.78171680260718,5.91917542616552,7.30248205623644,5.05989312622536,2.32833033665114,0.862271971731369,3.78212160335639,0.703804496655795,0.219195732427575,1.39023624612799,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0.630869845692382,37.0456604565424,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0.372140947668503,0,0,0,0,1.29327233116623,0,0,0,0,0,0,0,0.315270288212382,0,0.318909537314974,1.14704320301017,0.518054945597687,0.578596234326046,0,0,0.491764273019036,0,0,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,40.8078071855695,0.425820255624806,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08036656418786,1.55230420539305,0.643011105094777,0.177340233642274,0.356737635204141,0.822745103010605,0.304464949114599,2.81606049676452,0.21183207086382,0,0,0,0,0,0,0.291480836629851,0,3.2465467351592,0,0.370389054739423,1.31857919903284,1.36694227721025,2.0590035588587,0,0.139951452323658,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.2604087696879,0.104859344425711,0,0,0,0.202725215290164,0.410843828659309,0,0.179026695667481,0.596044064343795,0.120195449519969,0.147689527174577,0.100966449948148,0.15241361331,0,0.584747284438515,0.192423683280659,0,0,40.1794575607057,123.535980551248,30.2192309455341,0.19318959403219,4.50437941082837,0.36630324853453,0,0,0,0.460325236507177,0.572895513439397,0.171853182343688,0,0,0,0,0,0,2.28332164685189,3.59122386060928,6.65861062441123,5.83456120963906,6.07878171621149,3.67687016900028,2.00022055021454,1.85431551515005,2.24643446714271,1.26348605881899,2.02783439912192,1.32038438970253,2.52832070168682,1.72867911493147,2.23998328926892,1.90517476513229,1.97003354106254,2.12200142510076,1.64834360321323,1.32479028120958,1.71434626192708,1.24233064311536,2.14592570952589,2.18019624948493,1.59985946706062,3.21535509988371,0.914639864363863,2.36762740294059,3.39510284614654,1.68342681497322,1.42362021749009,2.9551344712669,0.818462086339379,1.23949472948773,2.12197272079256,4.74640098082097,0.701794825336225,1.28922632428979,0,0.220591419119515,0.231867835620421 | |||
|short_description=p1@Eomes | |||
}} | |||
Revision as of 17:07, 14 September 2013
| Short description: | p1@Eomes |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Eomes_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1850 |
| Association with transcript: | 0bp_to_NM_001164789, NM_010136, uc009rzo.2, uc009rzp.2, uc009rzq.2_5end |
| EntrezGene: | Eomes |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neuron of cerebral cortex | 6.50e-09 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
