FFCP PHASE1:Mm9::chr9:43875222..43875236,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=53376|HGNC=|UniProt=O88623|association_with_transcript=118bp_to_ENSMUST00000034508,NM_198092,uc009pbn.1,uc012gro.1_5end|description=CAGE_peak_6_at_Usp2_5end|id=chr9:43875222..43875236,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002453,8.61e-08,8;CL:0000333,5.60e-07,10;CL:0000095,5.60e-07,10;CL:0000243,5.60e-07,10;CL:0000123,5.60e-07,10;CL:0000125,5.60e-07,10;CL:0000030,5.60e-07,10;CL:0000339,5.60e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=2.08193501236232,0,0,0,0,0,0,1.29123323441576,2.53419699873,2.80877431586392,1.71217968225505,1.35612670292072,0.513602189793617,1.57356724354195,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0.588231488031014,0,0,1.76255545165808,1.21652317463417,1.65192076945513,3.12956537739216,2.18025156380447,7.68901639570651,6.22175677037707,2.51975558925653,2.87505128729943,0.671130424230945,7.25362142011344,4.03312558970957,0.257259436035947,0.85960031981627,1.03134418455488,0,0.528990979272033,0,0.677689064138264,0.889294796111139,0,0,0,4.49400165777607,7.30014780110954,0,0.135005938331691,0,0.571301968807607,0.662605622854841,0,0,0,2.20231761998777,0.893811366596314,1.99688493233117,0.131886287730194,0,0,0.558365998002762,0.56276261003168,1.22238598221448,0.294628585473668,0.284743361598206,0,0.37863096666592,1.66257432234928,3.18850937571846,0,0,0,0.649776417447669,0,3.23022166303029,0.170430322578058,0,0.35333957451034,1.40843419776681,0,0,0,0,0,0,0.68510327831436,0.517875767294343,10.5393918736026,0,0,0.922461989024234,1.65794904607885,2.23418543557839,2.76466500925286,1.23597483867187,2.60278842455841,1.76922110389975,1.45590164952668,3.3126227769059,3.39412677194655,0,4.09893115816166,2.72280718857492,0,0.479260498023681,0,0.381210681219194,1.04853447583376,2.74500361691176,0.251308704225729,2.9550134432687,1.02286182932132,2.0778804455956,1.46017136760982,1.01839363850316,0.622034853050465,0,1.05220927943237,0.130120442962704,0.229902104433473,0.180062129805349,0.452114453507145,0.544291993210623,0.12811372028485,0.374806898238915,2.58703370739016,0.215567992932842,0.189106080167819,0.527853372491847,0.219195732427575,0,0.696504333044333,3.70407845534298,0.398068533636986,0.702213187313235,0.51469581422943,0,1.44988040774851,0.938104239924385,0.36012412292203,2.13070262026689,0.787056926989615,1.23413690309903,0.697601834251224,1.07309360559848,1.63471479314037,0.822799249567402,1.47750717671186,3.24275238183423,5.26319954731196,2.63460138349261,1.8788898626452,2.10289948564127,0.411618449517138,0,0.264450566663544,0.213288250535234,0,0.128867461322093,0.403367049246685,0,0.190225626112559,0.474529061544512,0.329397909448022,0.251335208800269,0.397912944082302,0.779856348476481,0.898819408654221,0,0,0.569003702859245,0.228497025219458,1.1270773567308,0,0,0.49095073923223,0.189709611372772,0.147610147979602,0,0.370191491765402,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,0.369506380333209,0.37898282354097,0.162964976442026,0.169745085775188,0.704070744865506,0.167506257441816,0.238043640886014,0.390267295715598,0.157635144106191,0.664394068946325,0.318909537314974,0.327726629431476,0.172684981865896,0.433947175744535,0,0,0.491764273019036,0.827810238914197,1.44495530989013,1.52375192569864,0.983609672260053,7.32165688892682,0,0.390438744296638,0.430846795465598,0,0.222798674082394,0.283076530788832,1.61924280669958,0.584511715822624,0,1.60660658210904,0.283880170416537,0.890328018336276,0.651547837414304,2.47455184458803,1.32745138339963,0.242780636154981,0.302323556964751,0.188605079755898,0.590603785761546,0,0.516856586336442,0,0.712994756769443,0.948110273807448,1.05418608574999,0,1.70219802876894,0,0.129358683782755,0,0.177340233642274,0.535106452806212,0.493647061806363,0.304464949114599,2.11204537257339,0.42366414172764,0.220528398054962,4.45192882941996,7.26589920131575,3.37752379597673,5.96861720015682,9.35603128546849,0,2.03967832211561,0,0.206386867963223,0.555583582109135,0,0.27338845544205,0,0.849892149969277,1.25956307091292,0.829199842826543,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0.87345025498471,1.88810084938749,0.909188012978695,2.09404753587224,0.648074866458964,0,0,0.149516546043979,0,0,0.258319646955462,0.506868376472335,0.704143431874524,0.2604087696879,0.209718688851422,0,1.15212002503146,0.632022241256357,0.202725215290164,0.205421914329655,0.129920822977795,0.358053391334963,0.39736270956253,0.120195449519969,1.03382669022204,1.00966449948148,0.990688486514998,0.907435666231565,0.487289403698762,0.673482891482306,1.28564592399726,10.6563280299149,0.443971906748129,0.179427713218951,0,0.965947970160952,2.064507229963,0.183151624267265,3.00115730710692,0.501572104035363,2.25900737046827,0.460325236507177,1.71868654031819,2.57779773515531,2.05524755931193,0.755393897389701,3.37511250115903,2.2516060161211,4.98456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| ||
|EntrezGene=53376 | |||
|HGNC= | |||
|UniProt=O88623 | |||
|association_with_transcript=118bp_to_ENSMUST00000034508,NM_198092,uc009pbn.1,uc012gro.1_5end | |||
|description=CAGE_peak_6_at_Usp2_5end | |||
|id=chr9:43875222..43875236,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,8.61e-08,8;CL:0000333,5.60e-07,10;CL:0000095,5.60e-07,10;CL:0000243,5.60e-07,10;CL:0000123,5.60e-07,10;CL:0000125,5.60e-07,10;CL:0000030,5.60e-07,10;CL:0000339,5.60e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=2.08193501236232,0,0,0,0,0,0,1.29123323441576,2.53419699873,2.80877431586392,1.71217968225505,1.35612670292072,0.513602189793617,1.57356724354195,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0.588231488031014,0,0,1.76255545165808,1.21652317463417,1.65192076945513,3.12956537739216,2.18025156380447,7.68901639570651,6.22175677037707,2.51975558925653,2.87505128729943,0.671130424230945,7.25362142011344,4.03312558970957,0.257259436035947,0.85960031981627,1.03134418455488,0,0.528990979272033,0,0.677689064138264,0.889294796111139,0,0,0,4.49400165777607,7.30014780110954,0,0.135005938331691,0,0.571301968807607,0.662605622854841,0,0,0,2.20231761998777,0.893811366596314,1.99688493233117,0.131886287730194,0,0,0.558365998002762,0.56276261003168,1.22238598221448,0.294628585473668,0.284743361598206,0,0.37863096666592,1.66257432234928,3.18850937571846,0,0,0,0.649776417447669,0,3.23022166303029,0.170430322578058,0,0.35333957451034,1.40843419776681,0,0,0,0,0,0,0.68510327831436,0.517875767294343,10.5393918736026,0,0,0.922461989024234,1.65794904607885,2.23418543557839,2.76466500925286,1.23597483867187,2.60278842455841,1.76922110389975,1.45590164952668,3.3126227769059,3.39412677194655,0,4.09893115816166,2.72280718857492,0,0.479260498023681,0,0.381210681219194,1.04853447583376,2.74500361691176,0.251308704225729,2.9550134432687,1.02286182932132,2.0778804455956,1.46017136760982,1.01839363850316,0.622034853050465,0,1.05220927943237,0.130120442962704,0.229902104433473,0.180062129805349,0.452114453507145,0.544291993210623,0.12811372028485,0.374806898238915,2.58703370739016,0.215567992932842,0.189106080167819,0.527853372491847,0.219195732427575,0,0.696504333044333,3.70407845534298,0.398068533636986,0.702213187313235,0.51469581422943,0,1.44988040774851,0.938104239924385,0.36012412292203,2.13070262026689,0.787056926989615,1.23413690309903,0.697601834251224,1.07309360559848,1.63471479314037,0.822799249567402,1.47750717671186,3.24275238183423,5.26319954731196,2.63460138349261,1.8788898626452,2.10289948564127,0.411618449517138,0,0.264450566663544,0.213288250535234,0,0.128867461322093,0.403367049246685,0,0.190225626112559,0.474529061544512,0.329397909448022,0.251335208800269,0.397912944082302,0.779856348476481,0.898819408654221,0,0,0.569003702859245,0.228497025219458,1.1270773567308,0,0,0.49095073923223,0.189709611372772,0.147610147979602,0,0.370191491765402,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,0.369506380333209,0.37898282354097,0.162964976442026,0.169745085775188,0.704070744865506,0.167506257441816,0.238043640886014,0.390267295715598,0.157635144106191,0.664394068946325,0.318909537314974,0.327726629431476,0.172684981865896,0.433947175744535,0,0,0.491764273019036,0.827810238914197,1.44495530989013,1.52375192569864,0.983609672260053,7.32165688892682,0,0.390438744296638,0.430846795465598,0,0.222798674082394,0.283076530788832,1.61924280669958,0.584511715822624,0,1.60660658210904,0.283880170416537,0.890328018336276,0.651547837414304,2.47455184458803,1.32745138339963,0.242780636154981,0.302323556964751,0.188605079755898,0.590603785761546,0,0.516856586336442,0,0.712994756769443,0.948110273807448,1.05418608574999,0,1.70219802876894,0,0.129358683782755,0,0.177340233642274,0.535106452806212,0.493647061806363,0.304464949114599,2.11204537257339,0.42366414172764,0.220528398054962,4.45192882941996,7.26589920131575,3.37752379597673,5.96861720015682,9.35603128546849,0,2.03967832211561,0,0.206386867963223,0.555583582109135,0,0.27338845544205,0,0.849892149969277,1.25956307091292,0.829199842826543,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0.87345025498471,1.88810084938749,0.909188012978695,2.09404753587224,0.648074866458964,0,0,0.149516546043979,0,0,0.258319646955462,0.506868376472335,0.704143431874524,0.2604087696879,0.209718688851422,0,1.15212002503146,0.632022241256357,0.202725215290164,0.205421914329655,0.129920822977795,0.358053391334963,0.39736270956253,0.120195449519969,1.03382669022204,1.00966449948148,0.990688486514998,0.907435666231565,0.487289403698762,0.673482891482306,1.28564592399726,10.6563280299149,0.443971906748129,0.179427713218951,0,0.965947970160952,2.064507229963,0.183151624267265,3.00115730710692,0.501572104035363,2.25900737046827,0.460325236507177,1.71868654031819,2.57779773515531,2.05524755931193,0.755393897389701,3.37511250115903,2.2516060161211,4.98456649882625,3.10656187051092,0.207574695168353,0,0,0.729320151204882,0.419226325255965,1.2869045591501,1.55572709461131,2.06035057238894,2.88827288632634,2.02157769411038,1.2673964994512,2.26351609663291,1.40462261204824,1.02440243847791,0.976402972245426,0.476293691283074,1.15884325944855,1.15745532278223,0.824171801606613,2.06078488188156,0.685738504770831,1.06485483695602,1.66905332963125,2.0348498328526,2.25862512996793,1.18460451048347,0.73171189149109,1.57841826862706,0.679020569229309,2.80571135828869,1.30498519936592,1.18205378850676,0,1.39443157067369,3.4723189976605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| |||
|short_description=p6@Usp2 | |||
}} |
Revision as of 17:54, 14 September 2013
Short description: | p6@Usp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Usp2_5end |
Coexpression cluster: | NA |
Association with transcript: | 118bp_to_ENSMUST00000034508, NM_198092, uc009pbn.1, uc012gro.1_5end |
EntrezGene: | Usp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 8.61e-08 | 8 |
migratory neural crest cell | 5.60e-07 | 10 |
neuron associated cell | 5.60e-07 | 10 |
glial cell (sensu Vertebrata) | 5.60e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 5.60e-07 | 10 |
glial cell | 5.60e-07 | 10 |
glioblast | 5.60e-07 | 10 |
glioblast (sensu Vertebrata) | 5.60e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.