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MCL coexpression mm9:54: Difference between revisions

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{{MCL_coexpression_mm9
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|coexpression_dpi_cluster_scores_median=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107511441879825,0,0,0,0,0,0,0,0,0,0,0.196153902644494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506487468079408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7997098196491,0,0,0.0445418537893845,0.151730312771305,0.218821008874332,0.395065530119756,0.381134717839961,1.14884308803789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|gostat_on_MCL_coexpression=
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0000945!1.07e-26!16;UBERON:0010039!1.07e-26!16;UBERON:0005409!1.12e-11!47;UBERON:0001153!2.48e-10!1;UBERON:0001045!2.48e-10!1
|tfbs_overrepresentation_for_novel_motifs=0.00720292,0.0601806,0.0143759,7.92437,0.807625,0.476394,0.00230391,2.27021,0.468368,0.000842442,0.0636096,0.162609,0.167589,0.314399,1.8676,0,0.00556096,0.839422,0.519471,0.589166,0.210656,0.538934,0.138051,1.53465,0.0820796,0.91793,1.21646,0.345226,0.0355103,0.548132,0.0313757,1.9035,0.204484,0.740262,6.46481e-05,6.21395e-08,1.92363e-08,0.0969654,0.0937431,0.000516616,0.0991507,0.311183,0.460286,0.894225,0.0886833,0.0157107,0.102054,0.0915077,2.62609,0.17089,0.046684,0.0228439,0.333906,0.0644562,0.368878,0.61612,0.768731,0.0245751,0.338417,0.00335522,0.119286,0.0568036,1.60679,0.0902359,0.029506,0.063695,0.365508,0.186434,0.220879,0.111241,0.000241747,0.156014,1.80329e-14,0.0904757,1.2131e-06,0.0594208,0.420042,0.383505,4.28344,3.20458,0.00405818,0.000989002,0.0557408,0.0137501,0.00745169,3.58248e-14,0.0814154,0.478372,0.107522,0.787662,0.060831,0.00783306,0.284436,1.3193,1.26594e-05,1.53196,0.997107,0.469647,0.179134,0.0292185,0.600584,0.0606184,0.0568017,0.647153,1.40472,8.02537e-06,0.00142488,0.288792,0.131291,3.4863e-05,0.209714,0.801083,0.861857,0.965385,2.34234,0.0670468,8.37054e-08,0.0405037,0.0215588,2.66076,1.0574,1.78759,0.561505,0.933712,0.081999,0.0444682,0.206304,0.00338688,1.43927,0.783313,0.281041,1.09557,0.319961,0.177984,0.246775,0.635197,0.350386,0.22807,0.200847,0.578213,0.267689,0.163509,0.460075,0.944031,0.287852,0.00822068,1.2814,0.544418,0.587199,2.17591e-06,0.00459083,0,0.571142,0.0178596,0.266485,0.0259938,0.0507848,1.89246,7.29078,0.00895286,0.0574114,0.0389223,0.107135,0.361817,0.425348,0.643276,0.209432,1.64321,0.000194301
}}

Latest revision as of 14:36, 17 September 2013


Phase1 CAGE Peaks

 Short description
Mm9::chr10:118735746..118735747,-p@chr10:118735746..118735747
-
Mm9::chr10:80827591..80827604,-p1@4930404N11Rik
Mm9::chr11:100195721..100195728,+p1@Gast
Mm9::chr11:100576668..100576690,-p@chr11:100576668..100576690
-
Mm9::chr11:116168482..116168504,-p3@Exoc7
Mm9::chr11:3889927..3889949,+p4@Gal3st1
Mm9::chr11:58194063..58194121,+p@chr11:58194063..58194121
+
Mm9::chr11:58194122..58194139,+p@chr11:58194122..58194139
+
Mm9::chr11:58204119..58204151,+p@chr11:58204119..58204151
+
Mm9::chr11:58425591..58425605,-p@chr11:58425591..58425605
-
Mm9::chr11:58426058..58426084,-p@chr11:58426058..58426084
-
Mm9::chr11:58426983..58426997,-p1@2210407C18Rik
Mm9::chr11:98508069..98508086,+p1@Gsdma2
Mm9::chr12:92874353..92874357,-p@chr12:92874353..92874357
-
Mm9::chr13:98281106..98281135,+p@chr13:98281106..98281135
+
Mm9::chr14:60828255..60828262,+p@chr14:60828255..60828262
+
Mm9::chr14:63818095..63818121,-p@chr14:63818095..63818121
-
Mm9::chr15:74545262..74545278,+p1@Psca
Mm9::chr15:74546444..74546462,+p@chr15:74546444..74546462
+
Mm9::chr15:74546464..74546474,+p@chr15:74546464..74546474
+
Mm9::chr15:74546891..74546901,+p@chr15:74546891..74546901
+
Mm9::chr15:74546944..74546947,+p@chr15:74546944..74546947
+
Mm9::chr15:74547032..74547038,+p@chr15:74547032..74547038
+
Mm9::chr15:74547060..74547090,+p@chr15:74547060..74547090
+
Mm9::chr15:74547096..74547106,+p@chr15:74547096..74547106
+
Mm9::chr15:78686128..78686169,-p2@Lgals2
Mm9::chr15:82082899..82082905,+p5@1500009C09Rik
Mm9::chr16:21299969..21299974,+p@chr16:21299969..21299974
+
Mm9::chr16:32277734..32277737,+p7@Rnf168
Mm9::chr16:92540124..92540127,+p@chr16:92540124..92540127
+
Mm9::chr16:95479380..95479389,+p12@Kcnj15
Mm9::chr16:96607931..96607951,+p6@Igsf5
Mm9::chr16:96607997..96608007,+p7@Igsf5
Mm9::chr17:28695157..28695164,+p@chr17:28695157..28695164
+
Mm9::chr17:28695207..28695269,-p@chr17:28695207..28695269
-
Mm9::chr17:28695274..28695338,-p@chr17:28695274..28695338
-
Mm9::chr17:28695365..28695397,-p@chr17:28695365..28695397
-
Mm9::chr17:28695743..28695826,-p@chr17:28695743..28695826
-
Mm9::chr17:31301990..31301998,-p1@Gm3090
p1@Tff1
Mm9::chr17:35775067..35775078,-p@chr17:35775067..35775078
-
Mm9::chr17:35775084..35775098,-p@chr17:35775084..35775098
-
Mm9::chr17:35775239..35775248,-p@chr17:35775239..35775248
-
Mm9::chr17:35780629..35780644,-p1@Dpcr1
Mm9::chr17:44780526..44780528,-p@chr17:44780526..44780528
-
Mm9::chr17:47863783..47863797,+p1@Pgc
Mm9::chr17:47865681..47865691,+p@chr17:47865681..47865691
+
Mm9::chr17:47865709..47865712,+p@chr17:47865709..47865712
+
Mm9::chr17:47865718..47865741,+p@chr17:47865718..47865741
+
Mm9::chr17:47865745..47865773,+p@chr17:47865745..47865773
+
Mm9::chr17:47865779..47865794,+p@chr17:47865779..47865794
+
Mm9::chr17:47865796..47865822,+p@chr17:47865796..47865822
+
Mm9::chr17:47866199..47866204,+p@chr17:47866199..47866204
+
Mm9::chr17:47866212..47866223,+p@chr17:47866212..47866223
+
Mm9::chr17:47866224..47866240,+p@chr17:47866224..47866240
+
Mm9::chr17:47866243..47866292,+p@chr17:47866243..47866292
+
Mm9::chr17:47866305..47866315,-p@chr17:47866305..47866315
-
Mm9::chr17:47867029..47867086,+p@chr17:47867029..47867086
+
Mm9::chr17:47867091..47867101,+p@chr17:47867091..47867101
+
Mm9::chr17:47867102..47867105,+p@chr17:47867102..47867105
+
Mm9::chr17:47867547..47867554,+p@chr17:47867547..47867554
+
Mm9::chr17:47867590..47867591,+p@chr17:47867590..47867591
+
Mm9::chr17:47867611..47867620,+p@chr17:47867611..47867620
+
Mm9::chr17:47867637..47867650,+p@chr17:47867637..47867650
+
Mm9::chr17:47867669..47867677,+p@chr17:47867669..47867677
+
Mm9::chr17:47867807..47867817,+p@chr17:47867807..47867817
+
Mm9::chr17:47868151..47868180,+p@chr17:47868151..47868180
+
Mm9::chr17:47869340..47869361,+p@chr17:47869340..47869361
+
Mm9::chr17:47869368..47869402,+p@chr17:47869368..47869402
+
Mm9::chr17:47869409..47869419,+p@chr17:47869409..47869419
+
Mm9::chr17:47869903..47869914,+p@chr17:47869903..47869914
+
Mm9::chr17:47869919..47869922,+p@chr17:47869919..47869922
+
Mm9::chr17:47869927..47870007,+p@chr17:47869927..47870007
+
Mm9::chr17:47870008..47870009,+p@chr17:47870008..47870009
+
Mm9::chr17:47870010..47870020,+p@chr17:47870010..47870020
+
Mm9::chr17:47870700..47870704,+p@chr17:47870700..47870704
+
Mm9::chr17:47870708..47870733,+p@chr17:47870708..47870733
+
Mm9::chr17:47870752..47870760,+p@chr17:47870752..47870760
+
Mm9::chr17:47870762..47870779,+p@chr17:47870762..47870779
+
Mm9::chr17:47871127..47871150,+p@chr17:47871127..47871150
+
Mm9::chr17:47871151..47871184,+p@chr17:47871151..47871184
+
Mm9::chr17:47871188..47871196,+p@chr17:47871188..47871196
+
Mm9::chr17:47871206..47871247,+p@chr17:47871206..47871247
+
Mm9::chr17:47871261..47871273,+p@chr17:47871261..47871273
+
Mm9::chr17:47871278..47871286,+p@chr17:47871278..47871286
+
Mm9::chr17:47871288..47871303,+p@chr17:47871288..47871303
+
Mm9::chr17:47871307..47871354,+p@chr17:47871307..47871354
+
Mm9::chr17:47871355..47871370,+p@chr17:47871355..47871370
+
Mm9::chr17:47871387..47871390,+p@chr17:47871387..47871390
+
Mm9::chr17:47871424..47871430,-p@chr17:47871424..47871430
-
Mm9::chr17:53963118..53963120,-p@chr17:53963118..53963120
-
Mm9::chr17:53963433..53963462,-p@chr17:53963433..53963462
-
Mm9::chr17:53985133..53985149,-p1@Sult1c2
Mm9::chr17:6961292..6961300,-p@chr17:6961292..6961300
-
Mm9::chr18:36525428..36525439,+p4@0610010O12Rik
Mm9::chr18:36525466..36525477,+p3@0610010O12Rik
Mm9::chr19:10299737..10299752,-p@chr19:10299737..10299752
-
Mm9::chr19:10759665..10759699,-p@chr19:10759665..10759699
-
Mm9::chr19:11830344..11830355,+p@chr19:11830344..11830355
+
Mm9::chr19:30189839..30189855,-p@chr19:30189839..30189855
-
Mm9::chr19:39135542..39135573,+p@chr19:39135542..39135573
+
Mm9::chr19:44088335..44088344,-p@chr19:44088335..44088344
-
Mm9::chr19:7684955..7684973,-p@chr19:7684955..7684973
-
Mm9::chr1:121903590..121903605,+p2@Sctr
Mm9::chr1:121903622..121903636,+p1@Sctr
Mm9::chr1:121903649..121903660,+p3@Sctr
Mm9::chr1:133558525..133558551,+p4@Ctse
Mm9::chr1:133568858..133568871,+p@chr1:133568858..133568871
+
Mm9::chr1:133571437..133571453,+p@chr1:133571437..133571453
+
Mm9::chr1:133571493..133571515,+p@chr1:133571493..133571515
+
Mm9::chr1:133571522..133571537,+p@chr1:133571522..133571537
+
Mm9::chr1:133571607..133571635,+p@chr1:133571607..133571635
+
Mm9::chr1:133571653..133571663,+p@chr1:133571653..133571663
+
Mm9::chr1:169302548..169302553,-p@chr1:169302548..169302553
-
Mm9::chr1:189767213..189767224,+p@chr1:189767213..189767224
+
Mm9::chr1:40637366..40637376,+p@chr1:40637366..40637376
+
Mm9::chr2:131780729..131780744,-p@chr2:131780729..131780744
-
Mm9::chr2:155214829..155214834,+p@chr2:155214829..155214834
+
Mm9::chr2:178698913..178698915,+p@chr2:178698913..178698915
+
Mm9::chr2:25557549..25557556,+p@chr2:25557549..25557556
+
Mm9::chr3:105916279..105916296,+p1@Chia
Mm9::chr3:105934778..105934787,+p@chr3:105934778..105934787
+
Mm9::chr3:105934843..105934878,+p@chr3:105934843..105934878
+
Mm9::chr3:105934882..105934977,+p@chr3:105934882..105934977
+
Mm9::chr3:29911808..29911833,-p8@Mecom
Mm9::chr3:69663797..69663823,-p1@1110032A04Rik
Mm9::chr3:91884307..91884334,-p@chr3:91884307..91884334
-
Mm9::chr4:120997517..120997533,-p1@Gm12888
Mm9::chr4:148038430..148038450,+p@chr4:148038430..148038450
+
Mm9::chr4:55541446..55541450,-p@chr4:55541446..55541450
-
Mm9::chr4:76097357..76097367,+p@chr4:76097357..76097367
+
Mm9::chr4:87452167..87452178,-p8@Mllt3
Mm9::chr5:115898893..115898899,+p@chr5:115898893..115898899
+
Mm9::chr5:115916161..115916168,+p2@Pla2g1b
Mm9::chr5:115916184..115916198,+p4@Pla2g1b
Mm9::chr5:115916243..115916303,+p1@Pla2g1b
Mm9::chr5:115918454..115918467,+p@chr5:115918454..115918467
+
Mm9::chr5:115918485..115918498,+p@chr5:115918485..115918498
+
Mm9::chr5:115920790..115920802,+p@chr5:115920790..115920802
+
Mm9::chr5:115920820..115920837,+p@chr5:115920820..115920837
+
Mm9::chr5:115920845..115920850,+p@chr5:115920845..115920850
+
Mm9::chr5:115920862..115920874,+p@chr5:115920862..115920874
+
Mm9::chr5:115920879..115920889,+p@chr5:115920879..115920889
+
Mm9::chr5:115920897..115920926,+p@chr5:115920897..115920926
+
Mm9::chr5:115921700..115921702,+p@chr5:115921700..115921702
+
Mm9::chr5:115921990..115922012,+p@chr5:115921990..115922012
+
Mm9::chr5:115922017..115922024,+p@chr5:115922017..115922024
+
Mm9::chr5:115922031..115922089,+p@chr5:115922031..115922089
+
Mm9::chr5:115922064..115922126,-p@chr5:115922064..115922126
-
Mm9::chr5:115924513..115924524,+p@chr5:115924513..115924524
+
Mm9::chr5:115924527..115924584,+p@chr5:115924527..115924584
+
Mm9::chr5:115924582..115924587,-p@chr5:115924582..115924587
-
Mm9::chr5:115924587..115924590,+p@chr5:115924587..115924590
+
Mm9::chr5:115924621..115924647,+p@chr5:115924621..115924647
+
Mm9::chr5:115924657..115924671,+p@chr5:115924657..115924671
+
Mm9::chr5:115924682..115924691,+p@chr5:115924682..115924691
+
Mm9::chr5:115924719..115924726,-p@chr5:115924719..115924726
-
Mm9::chr5:124896948..124896972,+p6@Setd8
Mm9::chr5:28694780..28694824,+p@chr5:28694780..28694824
+
Mm9::chr5:31272143..31272160,+p@chr5:31272143..31272160
+
Mm9::chr6:113669444..113669462,-p2@Ghrl
Mm9::chr6:113669874..113669877,-p1@Ghrl
Mm9::chr6:115486987..115487016,-p@chr6:115486987..115487016
-
Mm9::chr6:87296342..87296361,-p@chr6:87296342..87296361
-
Mm9::chr6:87299037..87299067,-p@chr6:87299037..87299067
-
Mm9::chr6:87300898..87300915,-p1@Gkn1
Mm9::chr6:87323351..87323364,+p1@Gkn2
Mm9::chr6:87325744..87325762,+p@chr6:87325744..87325762
+
Mm9::chr6:87325782..87325790,+p@chr6:87325782..87325790
+
Mm9::chr6:87325802..87325816,+p@chr6:87325802..87325816
+
Mm9::chr6:87328121..87328135,+p@chr6:87328121..87328135
+
Mm9::chr6:87329279..87329286,+p@chr6:87329279..87329286
+
Mm9::chr6:87329357..87329368,+p@chr6:87329357..87329368
+
Mm9::chr6:87329458..87329493,-p@chr6:87329458..87329493
-
Mm9::chr6:87338840..87338856,-p1@Gkn3
Mm9::chr7:148822512..148822522,-p@chr7:148822512..148822522
-
Mm9::chr7:148822638..148822643,-p@chr7:148822638..148822643
-
Mm9::chr7:148822698..148822705,-p@chr7:148822698..148822705
-
Mm9::chr7:148822767..148822776,-p@chr7:148822767..148822776
-
Mm9::chr7:148822779..148822809,-p@chr7:148822779..148822809
-
Mm9::chr7:148822831..148822844,-p@chr7:148822831..148822844
-
Mm9::chr7:148822935..148822944,-p@chr7:148822935..148822944
-
Mm9::chr7:148822975..148823003,-p@chr7:148822975..148823003
-
Mm9::chr7:148823016..148823036,-p@chr7:148823016..148823036
-
Mm9::chr7:148823048..148823075,-p@chr7:148823048..148823075
-
Mm9::chr7:148823107..148823124,-p@chr7:148823107..148823124
-
Mm9::chr7:148823129..148823136,-p@chr7:148823129..148823136
-
Mm9::chr7:148823145..148823150,-p@chr7:148823145..148823150
-
Mm9::chr7:148823261..148823268,-p@chr7:148823261..148823268
-
Mm9::chr7:148823283..148823288,-p@chr7:148823283..148823288
-
Mm9::chr7:148823568..148823591,-p@chr7:148823568..148823591
-
Mm9::chr7:148823631..148823643,-p@chr7:148823631..148823643
-
Mm9::chr7:148823646..148823680,-p@chr7:148823646..148823680
-
Mm9::chr7:148823758..148823775,-p@chr7:148823758..148823775
-
Mm9::chr7:148823930..148823947,-p@chr7:148823930..148823947
-
Mm9::chr7:148824693..148824707,-p@chr7:148824693..148824707
-
Mm9::chr7:148824749..148824764,-p@chr7:148824749..148824764
-
Mm9::chr7:148824958..148824974,-p@chr7:148824958..148824974
-
Mm9::chr7:148825401..148825428,-p@chr7:148825401..148825428
-
Mm9::chr7:148825840..148825849,-p@chr7:148825840..148825849
-
Mm9::chr7:148825872..148825883,-p@chr7:148825872..148825883
-
Mm9::chr7:148825891..148825914,-p@chr7:148825891..148825914
-
Mm9::chr7:148825980..148825990,-p@chr7:148825980..148825990
-
Mm9::chr7:148826003..148826016,-p@chr7:148826003..148826016
-
Mm9::chr7:148826208..148826222,-p@chr7:148826208..148826222
-
Mm9::chr7:148841288..148841294,-p1@Muc6
Mm9::chr7:148991537..148991544,+p@chr7:148991537..148991544
+
Mm9::chr7:148991554..148991565,+p@chr7:148991554..148991565
+
Mm9::chr7:148991614..148991621,+p@chr7:148991614..148991621
+
Mm9::chr7:148994412..148994426,+p@chr7:148994412..148994426
+
Mm9::chr7:148994429..148994436,+p@chr7:148994429..148994436
+
Mm9::chr7:148994442..148994454,+p@chr7:148994442..148994454
+
Mm9::chr7:148994485..148994523,+p@chr7:148994485..148994523
+
Mm9::chr7:148994527..148994548,+p@chr7:148994527..148994548
+
Mm9::chr7:148995486..148995499,+p@chr7:148995486..148995499
+
Mm9::chr7:148998955..148998963,+p@chr7:148998955..148998963
+
Mm9::chr7:148999635..148999640,+p@chr7:148999635..148999640
+
Mm9::chr7:149004544..149004547,+p@chr7:149004544..149004547
+
Mm9::chr7:149005034..149005043,+p@chr7:149005034..149005043
+
Mm9::chr7:149620837..149620875,+p1@Syt8
Mm9::chr7:26586940..26586944,-p@chr7:26586940..26586944
-
Mm9::chr7:26588450..26588469,-p@chr7:26588450..26588469
-
Mm9::chr7:26601519..26601554,-p1@Cyp2s1
Mm9::chr7:26601567..26601582,-p2@Cyp2s1
Mm9::chr7:26601584..26601587,-p4@Cyp2s1
Mm9::chr7:26601635..26601647,-p5@Cyp2s1
Mm9::chr7:48153554..48153583,+p@chr7:48153554..48153583
+
Mm9::chr7:87534702..87534713,-p@chr7:87534702..87534713
-
Mm9::chr7:87648233..87648251,-p@chr7:87648233..87648251
-
Mm9::chr8:13387475..13387494,-p@chr8:13387475..13387494
-
Mm9::chr8:13388798..13388815,-p@chr8:13388798..13388815
-
Mm9::chr8:13389693..13389702,-p@chr8:13389693..13389702
-
Mm9::chr8:13389859..13389866,-p@chr8:13389859..13389866
-
Mm9::chr8:13390099..13390103,-p@chr8:13390099..13390103
-
Mm9::chr8:13396769..13396783,-p1@Atp4b
Mm9::chr8:40109127..40109136,+p@chr8:40109127..40109136
+
Mm9::chr8:63768125..63768126,-p1@1700001D01Rik
Mm9::chr8:64601903..64601920,-p1@Anxa10
Mm9::chr8:73416651..73416657,-p1@Slc5a5
Mm9::chr8:74281484..74281496,-p@chr8:74281484..74281496
-
Mm9::chr9:110566194..110566198,+p@chr9:110566194..110566198
+
Mm9::chr9:57807802..57807805,+p@chr9:57807802..57807805
+
Mm9::chr9:66871053..66871068,-p@chr9:66871053..66871068
-
Mm9::chr9:78057083..78057106,+p@chr9:78057083..78057106
+
Mm9::chr9:78078486..78078498,+p1@Gsta1
Mm9::chr9:99512887..99512948,+p1@A4gnt
Mm9::chr9:99512964..99512976,+p2@A4gnt
Mm9::chr9:99592598..99592623,-p@chr9:99592598..99592623
-
Mm9::chr9:99617678..99617693,-p1@Cldn18
Mm9::chrM:4870..4907,+p1@ENSMUST00000082397
Mm9::chrX:137442050..137442072,+p2@Vsig1
Mm9::chrX:137442141..137442174,+p1@Vsig1
Mm9::chrX:54045843..54045856,+p@chrX:54045843..54045856
+
Mm9::chrX:54045905..54045937,+p@chrX:54045905..54045937
+
Mm9::chrY:2857172..2857179,+p@chrY:2857172..2857179
+
Mm9::chrY:2858251..2858257,+p@chrY:2858251..2858257
+


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

no results for this coexpression

Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br><br>uberon_data<br><br>

Uber Anatomy
Ontology termp-valuen
stomach1.07e-2616
food storage organ1.07e-2616
gastrointestinal system1.12e-1147
caecum2.48e-101
midgut2.48e-101


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)
MA0003.10
MA0004.10.10369
MA0006.11.54168e-05
MA0007.12.12362
MA0009.11.69933
MA0014.10
MA0017.11.14355
MA0019.10.504497
MA0024.10.0519087
MA0025.10.3136
MA0027.11.03431
MA0028.18.63342e-05
MA0029.10.998458
MA0030.11.33468
MA0031.10.628078
MA0038.10.0340077
MA0040.10.0279201
MA0041.10.800341
MA0042.10.0711629
MA0043.10.0563797
MA0046.10.600239
MA0048.10.00131125
MA0050.10.476915
MA0051.10.075857
MA0052.10.0300788
MA0055.10.325683
MA0056.10
MA0057.17.39537e-05
MA0058.10.0386833
MA0059.10.877314
MA0060.12.32403e-06
MA0061.15.73092e-05
MA0063.10
MA0066.10.368792
MA0067.10.0626712
MA0068.10.00109841
MA0069.10.0898765
MA0070.12.62575
MA0071.10.260051
MA0072.10.744279
MA0073.10.0990083
MA0074.11.21987
MA0076.10.00113262
MA0077.10.274934
MA0078.10.188929
MA0081.10.124457
MA0083.10.151432
MA0084.10.623884
MA0087.10.238872
MA0088.10.0225179
MA0089.10
MA0090.12.89643
MA0091.11.52082
MA0092.10.708909
MA0093.10.0234398
MA0095.10
MA0098.10
MA0100.10.149646
MA0101.10.00615491
MA0103.10.826327
MA0105.11.67899e-07
MA0106.10.609419
MA0107.10.000622541
MA0108.20.413232
MA0109.10
MA0111.10.66652
MA0113.10.6545
MA0114.10.273649
MA0115.10.311437
MA0116.10.0338551
MA0117.10.00876854
MA0119.10.0230715
MA0122.10.291147
MA0124.10.0469464
MA0125.10.291255
MA0130.10
MA0131.10.000264861
MA0132.10
MA0133.10
MA0135.10.0730153
MA0136.10.0841535
MA0139.10.0100292
MA0140.13.08492
MA0141.10.749523
MA0142.10.0264264
MA0143.10.181238
MA0144.10.00157884
MA0145.10.0247525
MA0146.14.67147e-07
MA0147.13.42088e-07
MA0148.14.62311
MA0149.10.00332788
MA0062.20.000544622
MA0035.22.19298
MA0039.21.3056e-12
MA0138.20.845749
MA0002.21.42204
MA0137.20.178003
MA0104.27.09502e-07
MA0047.22.22481
MA0112.20.0184135
MA0065.20.0139019
MA0150.10.08018
MA0151.10
MA0152.10.066785
MA0153.10.65869
MA0154.10.324481
MA0155.10.0217745
MA0156.10.0731095
MA0157.10.048799
MA0158.10
MA0159.11.15473
MA0160.10.204678
MA0161.10
MA0162.11.50049e-13
MA0163.15.17978e-06
MA0164.10.439262
MA0080.20.77315
MA0018.20.0109436
MA0099.20.611435
MA0079.20
MA0102.20.251786
MA0258.10.977067
MA0259.16.62976e-05
MA0442.10
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