Personal tools

MCL coexpression mm9:1984: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{MCL_coexpression_mm9
{{MCL_coexpression_mm9|coexpression_dpi_cluster_scores_mean=-0.307968324288913,1.238529970478,1.2356157936263,1.31157203007568,1.31723619423513,0.566906294862252,0.597185506179683,0.0765816206952707,-0.116227789127551,-0.049776663318255,-0.239284583998353,-0.354399316682328,-0.0734694950519253,-0.147783633016034,-0.0105355475491941,0.0911936372253548,0.0959767092610822,0.0647030737540829,0.0920182901512232,0.0463510325416538,0.512659813164349,-0.23440458253206,-0.271465567099786,0.911320392225243,0.842726989497071,1.0820842825588,0.940876587906267,0.89385777927707,0.897337330658981,0.938291675141366,0.699601265699096,-0.357520962998933,-0.410902439127108,-0.410902439127108,0.488138291125831,0.578001403058246,0.505360466734715,1.07204239618655,1.13753659168285,1.13690546301986,1.01558522096644,1.09512575979504,1.04459895674084,0.633808243367289,0.673943095651308,0.728535087856882,0.312774023031364,-0.332317611175482,-0.239668657695395,-0.274701665980767,0.209170635344074,-0.410902439127108,-0.362645663992235,-0.00959626440684338,0.0875188659439845,0.28999644854538,0.697127156891949,0.519486870813728,-0.410902439127108,-0.36480120833386,-0.410902439127108,-0.354724570719353,0.0251864299021689,0.648171112294806,0.75757393364982,0.660708110399522,-0.0506634463742309,-0.230460313958525,-0.400190700356389,-0.410902439127108,-0.410902439127108,-0.383621667454351,-0.367567987585844,-0.410902439127108,-0.410902439127108,-0.410902439127108,0.0113587348410937,-0.00704354066577235,-0.0920299780163448,-0.410902439127108,-0.410902439127108,-0.410902439127108,-0.038215208328902,0.00466492910692601,0.0656922752238862,-0.410902439127108,-0.396450582007424,-0.410902439127108,-0.123034100167557,-0.0329982517309462,0.661388951251579,0.572490716775037,0.378922335476637,0.347440546184663,0.536019324953318,0.495942576484964,0.541891561815817,0.34997471900512,0.311407337363481,0.264617489350188,-0.299564530718878,0.246481822699831,0.176565350019602,-0.410902439127108,0.061390186498263,-0.034264973569894,0.0674683179312001,0.753301047138379,0.593834250479763,0.537294515095213,0.0526070198214256,0.511139380563986,0.512955407425263,0.520864864702821,0.525963075646181,0.487375847098258,0.366975779419593,0.75455878962306,0.56376152775692,-0.0576803661359905,0.178109291006961,0.190869755669595,0.587654406458592,0.0690897597373988,-0.064880128677882,1.28304441321241,0.141471230322009,0.300012154150088,0.353778961344375,0.0503340189820676,0.0890389640762951,-0.410902439127108,0.0691319355309462,-0.204735061111441,-0.0515449839128301,-0.224102740892806,0.0665361814132334,0.39891636187862,0.258461858058106,0.265107250475022,-0.410902439127108,-0.410902439127108,-0.392926220791826,-0.30047243867509,-0.164936957065628,-0.274223168641851,-0.237768880587855,0.213266841455904,-0.410902439127108,-0.410902439127108,-0.375707803319551,-0.287679832033002,-0.336256719827377,-0.154360880756842,-0.0769342880482237,-0.391194540417131,0.476452835379748,0.499847163990563,0.552094401580628,-0.410902439127108,-0.38802737362279,-0.359531591266755,-0.280298228374606,-0.292336731173405,-0.219260791440281,-0.212236971124324,-0.099247183567086,0.123033105606153,-0.0796359598523718,-0.0609240446017056,0.242720231091017,0.323759003613785,0.34609870936959,0.572915856935655,-0.0273411109665607,-0.369313812145696,1.90106546268809,1.22663146095236,-0.410902439127108,-0.410902439127108,-0.321416725955475,-0.0673086711549755,0.319068322791898,0.56376776297887,1.15771120203314,0.861856914200611,0.948645820198673,0.925066480253151,0.956376496651812,1.0500158072672,1.16330352715438,1.15842153628484,-0.327078944780629,-0.187582536162478,-0.328956618015974,-0.353680387503764,-0.322617079994681,-0.192087039004801,-0.138639585190198,0.14877985974316,0.126885619958017,0.221489788130838,0.726013344958042,-0.394149136897574,-0.355421935000981,-0.292582403955284,-0.136750957631394,-0.0731639843408625,-0.00534279358542455,0.18019158965107,0.20514063965249,0.107120936572636,0.287229524621967,0.326761986599219,0.314993992176202,0.549052779734821,0.562265163394795,0.613094133260546,0.991831267651458,-0.410902439127108,-0.378119121215592,-0.292928993332549,-0.0389742278805055,0.196954570882644,0.582303319287643,0.655998133775197,0.351665428859565,0.363199051412976,0.360609937855671,0.841552863712477,0.720546234587892,0.963708460819947,1.09486342398438,0.966375148870329,1.76127589128631,1.68342868791789,0.114083948546478,-0.0941112032840357,0.403843687327816,0.365775869966437,-0.410902439127108,-0.375114473926658,-0.335595262219777,-0.410902439127108,-0.327213123840688,-0.383839298823703,-0.410902439127108,-0.410902439127108,-0.410902439127108,0.0283631051795607,0.504330284413162,-0.114737663852857,0.0160471520717162,0.684384615994262,0.316751675594098,-0.410902439127108,-0.282234327633777,-0.320023424224648,-0.167537533037745,-0.172171646905444,0.600656758462806,-0.0511989838740442,-0.17046718784589,0.332591558564403,0.150375518686127,0.334489973886894,0.098529011665713,-0.410902439127108,-0.372712409098729,-0.331821499558618,-0.246475864713034,-0.299747292942243,-0.279169434697784,0.00212807371630855,0.754066535812662,0.345813929415063,0.357140855735468,0.653848390081126,0.511940363947316,0.236801596652649,0.404620576127175,0.404133523526839,1.11544697057678,0.0140830758679193,0.456921267741972,0.16042015345747,0.258483200824032,0.0425703746132915,0.0918165168340884,0.132495250580615,-0.101030639218926,-0.052562118189254,-0.00677996704842845,0.33184776811038,-0.379016659091463,-0.211376443568242,-0.167523566671157,0.195406418291379,0.3816370932447,0.238639704443103,0.314194860218209,0.436965624059086,0.626461599320908,0.53906953666883,-0.0887622409219593,-0.309105058262911,-0.253906908301966,-0.181075732566467,-0.174689155256768,-0.149455387113243,-0.0288468226002709,-0.127974727097501,-0.135064104029305,-0.119828958642317,0.0899081646458336,0.201878738541433,-0.359319068902981,-0.276688494910932,-0.177629064367111,-0.198183407120539,-0.0275447656497279,-0.0798887386287816,-0.0414743891004335,-0.0274340372206159,-0.103592223898545,-0.0917610563778422,0.0845190588914467,-0.0043484959437779,0.0637918013965047,0.612511281553125,-0.410902439127108,-0.401574320791022,-0.39405245466411,0.414755333789876,0.786047484049992,0.736835202256735,0.771787084091886,0.194721179968976,-0.410902439127108,-0.340040354737901,-0.312552502304938,-0.376465837250273,-0.354247145762431,-0.349808793076475,-0.298892116526979,-0.16588559667726,-0.21747252938295,-0.288432764351387,-0.400181086237709,-0.410902439127108,-0.376673396677485,-0.26539299725295,-0.291819754520175,-0.053707637302604,0.0671898620262972,0.0594560055674771,0.0936959211990063,-0.00075615526509399,0.0794441326324571,0.0165326457008064,0.100228632981792,0.0474986167454945,0.0638305576932496,0.0852863595753733,0.0368723104163875,-0.000868114240182748,0.0545656770834896,0.0830006120750731,0.126439156976404,0.10662934538315,-0.00692280811763677,0.120200710127275,0.0371737005400123,0.04686826629497,0.0298786479148627,0.0713364728394103,0.0221245283464484,-0.157468086848056,-0.00277297948371975,0.0203497364228691,-0.0235735379345319,-0.0153427192662668,0.0440415489531751,-0.113678766541789,0.133415374061554,0.283152611175584,0.147665960178802,0.0953879592328918,0.0887776890954329|coexpression_dpi_cluster_scores_median=-0.270287187668078,1.39897330460312,1.2615286925605,1.42011411104279,1.38442226592222,0.622082229702603,0.706725160270212,0.114374249893942,-0.0872319669881425,-0.082446195458804,-0.263265090190959,-0.396877178103613,-0.0940226903062832,-0.147050261874832,-0.0170311719066541,0.0482793130259551,0.0356836206611335,0.0247681444529239,0.0837895517343575,-0.0135813578985978,0.480550509576403,-0.241703489512927,-0.214343616255236,0.941295552812477,0.928683880398517,1.25373454690867,1.06776023486972,0.99021292579146,1.00376320340276,1.01668081055436,0.760455179159245,-0.386454408053531,-0.415819484932478,-0.415819484932478,0.0866278609485355,0.292246329713876,0.13928486143098,1.09394282581611,1.12627119259368,1.10960967024952,1.16695324484934,1.22590223824301,1.0807265505428,0.686422485996785,0.736802081963743,0.788926456311047,0.367152747216423,-0.337234656980853,-0.152438502271761,-0.268349568536056,0.250315293587542,-0.415819484932478,-0.382138483825504,0.0323618907075984,0.115273893235504,0.292053103878556,0.728369256176068,0.528585369822022,-0.415819484932478,-0.323617023345983,-0.415819484932478,-0.303463748116968,0.0394701986647492,0.734170634409462,0.788019954701634,0.644948702180555,-0.0446979787260207,-0.239498185679872,-0.394396007391041,-0.415819484932478,-0.415819484932478,-0.361257941586964,-0.372485033391214,-0.415819484932478,-0.415819484932478,-0.415819484932478,0.0377956763796638,-0.0455790025886582,-0.0938074721883056,-0.415819484932478,-0.415819484932478,-0.415819484932478,-0.037113716843108,-0.0591510084187255,0.0104712165084463,-0.415819484932478,-0.386915770693111,-0.415819484932478,-0.130408820741092,-0.0146182992017659,0.712966606202101,0.54192699281185,0.243223603023896,0.368173238526662,0.471574025772597,0.467402458005463,0.593246066668372,0.395415659692286,0.357080084421441,0.311317923078293,-0.290175066075559,0.285012008431967,0.199952678227841,-0.415819484932478,0.0551358072029525,-0.0334293463776105,0.0704572884840543,0.786701775960205,0.763238917175721,0.527371082390999,0.0350665016612193,0.543535354605942,0.448697784939606,0.494417633720957,0.582897994874855,0.442229015313824,0.315726136779033,0.789331653976041,0.605120885039075,-0.0606882553260925,0.216315365395489,0.246736899132872,0.615979147478633,0.0211189306385557,-0.0866834999850195,1.40753289119831,0.059955826631135,0.230380261096223,0.422371016524435,0.0999661248898248,0.0445351527145633,-0.415819484932478,0.0643543949336395,-0.233865714024643,-0.0443182283302412,-0.205733109175807,0.047152430702624,0.40459275499931,0.299282079327127,0.336116877731522,-0.415819484932478,-0.415819484932478,-0.415819484932478,-0.275959908108428,-0.211289389862161,-0.213082509982618,-0.223377280773792,0.252652438166155,-0.415819484932478,-0.415819484932478,-0.345430213317364,-0.279112462601722,-0.319801501295317,-0.170874471507746,-0.0821297532894945,-0.415819484932478,0.593125933863317,0.570178772320097,0.54465526943722,-0.415819484932478,-0.415819484932478,-0.349030213306063,-0.271138857727837,-0.250745990932758,-0.22422331581395,-0.161092417749541,-0.0930076967014219,0.130720619549457,-0.0207893762357722,0.00306781343902792,0.270191717307221,0.291541075820501,0.367862679584076,0.548815077954421,-0.0660344807273315,-0.373281531974336,1.9891247783294,1.37031815664094,-0.415819484932478,-0.415819484932478,-0.307824029859156,-0.103836614961239,0.165363138229869,0.535077952076309,1.20307685741122,0.946111358213369,1.06098870521173,1.11953986736353,1.13086275859025,1.15120047847839,1.14182180753656,1.15471129820703,-0.318007500669462,-0.200136863522361,-0.329325718087613,-0.341625731324785,-0.338832440359803,-0.186768682192961,-0.073917020831751,0.0908783684819525,0.12456918014836,0.22495046373744,0.653462780238448,-0.415819484932478,-0.376852426971959,-0.303865713179904,-0.147899013323086,-0.073774539514262,0.00384476011283441,0.181099626821744,0.212637713042242,0.153852080254396,0.359621105738152,0.323880250403525,0.284940107884341,0.550831741466463,0.520322961248812,0.536366053151229,1.02704057449521,-0.415819484932478,-0.383036167020963,-0.292395399145306,-0.0364954978007215,0.214999953345613,0.674609333947301,0.575955883844869,0.426192545798108,0.385115524528981,0.421445403114983,0.86435700749288,0.779191930068789,0.913613654590631,1.31112026825156,1.20912736618464,1.84452092149251,1.79424064473696,0.0919886293001941,-0.0794494310353719,0.439983360567859,0.398695287187427,-0.415819484932478,-0.415819484932478,-0.307568927396806,-0.415819484932478,-0.292118333927467,-0.415819484932478,-0.415819484932478,-0.415819484932478,-0.415819484932478,-0.0118608566751215,0.628733277469493,-0.136274199922053,0.0217136118300468,0.830974622079584,0.384810206218534,-0.415819484932478,-0.215842710109232,-0.271580246115427,-0.172454578843115,-0.0872319669881425,0.711379650564607,-0.0872319669881425,-0.127393442007529,0.371795951138351,0.139166397960001,0.434400030597482,0.0752123109624535,-0.415819484932478,-0.339439424875721,-0.328587517944335,-0.328587517944335,-0.328587517944335,-0.262429743468727,0.0053060457114736,0.689664535981249,0.309817630555604,0.351342195278952,0.683595777622167,0.611924746085107,0.280202826785544,0.441772543891563,0.389806611898872,1.23028619868475,0.0088113299314896,0.53158486471185,0.173164767412736,0.260538032229802,0.0100398239241646,0.0837711672124248,0.0735370136179972,-0.235778307683212,-0.114567329019203,-0.0444958033289639,0.408074655937675,-0.352047924861188,-0.189935843026814,-0.155421805090134,0.166619838797951,0.373745537875851,0.2415385754019,0.340179615702357,0.431250711620275,0.665334333905943,0.51753722020692,-0.0723272487017425,-0.314022104068281,-0.28491545475663,-0.190672727502125,-0.21255638767326,-0.107766100810539,-0.0662647468903382,-0.112076344951167,-0.0603181042739465,-0.115260258074228,0.07920127727931,0.203352906160516,-0.390050619861627,-0.311563100888504,-0.13006188806503,-0.166780026790593,-0.0478800919742038,-0.0550871759922842,-0.040383159532627,-0.0264048130591089,-0.0804723210159901,-0.0629428138717258,0.0779123898192968,-0.0250063264829125,0.045901720987848,0.642045885798272,-0.415819484932478,-0.397163248260306,-0.382119516006483,0.423100447363856,0.847963915609601,0.888350071721882,0.855432261354949,0.204153168632945,-0.415819484932478,-0.328587517944335,-0.317469548110308,-0.381382883055643,-0.379906773580527,-0.328587517944335,-0.30380916233235,-0.149464433413011,-0.187511629596648,-0.32521788884399,-0.415819484932478,-0.415819484932478,-0.347361400033232,-0.296881783833242,-0.283593260401752,-0.0208576627994475,0.07224881923415,0.0388239374231692,-0.00053308153229853,-0.000166710518150981,0.0547170416870057,-0.0166194415616865,0.0537353509537695,0.00434659655860305,0.0190157667878894,0.0363588213249572,0.0145375875874562,0.0159480992054024,-0.0120206485805671,0.0556284088969135,0.152600821586705,0.0527386316115659,-0.00819844299765105,0.0963424758462527,0.0269283742230619,0.0222356230726796,0.0176967516755124,0.080999270350502,-0.000575077176814751,-0.0872319669881425,-0.0230175110576965,0.000949572653699202,0.0208170436298292,-0.0184359122469267,0.0466573710145401,-0.109025897132352,0.113206184266573,0.284625997948299,0.190195941696827,0.147592906731516,0.0899939769330702|gostat_on_MCL_coexpression=|ontology_enrichment_celltype=|ontology_enrichment_disease=|ontology_enrichment_uberon=UBERON:0007023!2.69e-10!51;UBERON:0000160!1.28e-09!31;UBERON:0004119!2.49e-09!118;UBERON:0000925!2.49e-09!118;UBERON:0006595!2.49e-09!118;UBERON:0005409!3.43e-09!47;UBERON:0001007!7.52e-09!116;UBERON:0001555!7.52e-09!116;UBERON:0007026!7.52e-09!116;UBERON:0004921!3.95e-08!114;UBERON:0004923!1.17e-07!24;UBERON:0000344!1.72e-07!15;UBERON:0005256!3.45e-07!45|tfbs_overrepresentation_for_novel_motifs=0.641384,0.801438,0.612053,0.688265,0.483253,0.704257,0.803568,0.370124,0.993085,0.162942,0.755749,0.790506,0.37041,0.81685,1.2551,0,1.02248,0.473993,0.352304,0.683591,0.570433,0.197567,0.815872,0.481455,0.620553,0.846564,1.62441,0.727368,0.535752,0.290745,1.6946,1.12823,0.471365,0.318879,0.503207,0.30022,0.460474,0.786577,0.434783,0.40068,0.478558,0.717547,0.185353,0.504971,0.325217,0.675898,0.938241,0.744678,0.949442,0.539131,1.0041,0.875451,0.282443,1.2746,1.29252,0.82458,0.549352,0.776619,0.331485,0.822375,1.10737,0.885556,0.39557,0.992216,0.8366,1.03484,1.43193,1.78579,1.1025,1.63712,0.590754,0.377213,0.205546,1.32691,0.323563,0.310084,0.318792,0.926147,1.08947,0.575233,0.37865,1.04072,0.884013,0.362446,1.20828,0.11855,0.129654,0.290918,0.943446,1.94914,1.50286,1.21342,1.14153,0.490141,0.430015,0.409166,0.367176,1.14445,0.938512,0.264911,0.460566,1.12793,1.25667,1.00472,1.00361,0.717061,1.06633,0.740267,0.580757,0.57247,1.53136,1.25851,0.576517,0.7614,1.51002,1.1991,0.143825,0.692434,1.02384,0.456123,1.33244,0.970073,0.848526,0.925183,1.56496,1.09333,0.812403,1.13449,1.43038,0.493609,1.23918,0.680176,1.40022,0.839311,1.53196,0.195549,0.650785,0.719099,1.482,2.31884,1.91709,1.43673,0.861473,1.1391,0.996781,0.718046,0.941555,2.27909,0.653418,0.485304,0.79777,0.184289,1.27621,0.416214,0.838313,1.35996,0.87653,0.516549,0.63863,0.650472,1.49167,1.20739,1.09379,0.630949,0.993294,0.830321,1.16191,0.788782,0.0824127|tfbs_overrepresentation_jaspar=MA0003.1;0.142214,MA0004.1;0.6888,MA0006.1;0.497533,MA0007.1;0.672186,MA0009.1;1.15569,MA0014.1;0.0809287,MA0017.1;0.528196,MA0019.1;0.964875,MA0024.1;1.11019,MA0025.1;1.39562,MA0027.1;2.81824,MA0028.1;0.509589,MA0029.1;1.08753,MA0030.1;1.09438,MA0031.1;1.05719,MA0038.1;0.846479,MA0040.1;1.16866,MA0041.1;0.604221,MA0042.1;0.589368,MA0043.1;1.25564,MA0046.1;1.1929,MA0048.1;0.735223,MA0050.1;0.731539,MA0051.1;0.856094,MA0052.1;1.17701,MA0055.1;0.396346,MA0056.1;0,MA0057.1;0.251896,MA0058.1;0.581673,MA0059.1;0.59559,MA0060.1;1.83511,MA0061.1;0.438628,MA0063.1;0,MA0066.1;0.834648,MA0067.1;1.50873,MA0068.1;0.256913,MA0069.1;1.17737,MA0070.1;1.16732,MA0071.1;0.73062,MA0072.1;1.15853,MA0073.1;0.00221226,MA0074.1;0.795862,MA0076.1;0.550092,MA0077.1;1.13603,MA0078.1;0.891476,MA0081.1;0.621611,MA0083.1;1.25482,MA0084.1;1.84013,MA0087.1;1.21037,MA0088.1;0.582815,MA0089.1;0,MA0090.1;1.56748,MA0091.1;0.703314,MA0092.1;0.651119,MA0093.1;0.519148,MA0095.1;0,MA0098.1;0,MA0100.1;1.84237,MA0101.1;0.605676,MA0103.1;0.540576,MA0105.1;0.313353,MA0106.1;0.899777,MA0107.1;0.533522,MA0108.2;0.989014,MA0109.1;0,MA0111.1;0.666525,MA0113.1;0.869608,MA0114.1;0.43587,MA0115.1;1.25852,MA0116.1;0.497293,MA0117.1;1.22527,MA0119.1;0.606338,MA0122.1;1.24573,MA0124.1;1.45461,MA0125.1;1.37907,MA0130.1;0,MA0131.1;0.960068,MA0132.1;0,MA0133.1;0,MA0135.1;1.29308,MA0136.1;0.817395,MA0139.1;0.365453,MA0140.1;0.78318,MA0141.1;1.38335,MA0142.1;1.04199,MA0143.1;0.887119,MA0144.1;1.11951,MA0145.1;0.21199,MA0146.1;0.313734,MA0147.1;0.453952,MA0148.1;0.706718,MA0149.1;0.611881,MA0062.2;0.319836,MA0035.2;0.788288,MA0039.2;0.0959929,MA0138.2;0.951653,MA0002.2;0.368961,MA0137.2;0.559766,MA0104.2;0.386166,MA0047.2;0.845655,MA0112.2;0.211985,MA0065.2;1.14711,MA0150.1;0.67206,MA0151.1;0,MA0152.1;0.84577,MA0153.1;1.31015,MA0154.1;0.263609,MA0155.1;0.230016,MA0156.1;0.549102,MA0157.1;1.0083,MA0158.1;0,MA0159.1;0.465802,MA0160.1;0.71003,MA0161.1;0,MA0162.1;0.10667,MA0163.1;0.0996272,MA0164.1;0.817786,MA0080.2;0.534538,MA0018.2;0.828253,MA0099.2;0.944966,MA0079.2;0.00774881,MA0102.2;1.8929,MA0258.1;0.419871,MA0259.1;0.441366,MA0442.1;0}}
|coexpression_dpi_cluster_scores_mean=-0.307968324288913,1.238529970478,1.2356157936263,1.31157203007568,1.31723619423513,0.566906294862252,0.597185506179683,0.0765816206952707,-0.116227789127551,-0.049776663318255,-0.239284583998353,-0.354399316682328,-0.0734694950519253,-0.147783633016034,-0.0105355475491941,0.0911936372253548,0.0959767092610822,0.0647030737540829,0.0920182901512232,0.0463510325416538,0.512659813164349,-0.23440458253206,-0.271465567099786,0.911320392225243,0.842726989497071,1.0820842825588,0.940876587906267,0.89385777927707,0.897337330658981,0.938291675141366,0.699601265699096,-0.357520962998933,-0.410902439127108,-0.410902439127108,0.488138291125831,0.578001403058246,0.505360466734715,1.07204239618655,1.13753659168285,1.13690546301986,1.01558522096644,1.09512575979504,1.04459895674084,0.633808243367289,0.673943095651308,0.728535087856882,0.312774023031364,-0.332317611175482,-0.239668657695395,-0.274701665980767,0.209170635344074,-0.410902439127108,-0.362645663992235,-0.00959626440684338,0.0875188659439845,0.28999644854538,0.697127156891949,0.519486870813728,-0.410902439127108,-0.36480120833386,-0.410902439127108,-0.354724570719353,0.0251864299021689,0.648171112294806,0.75757393364982,0.660708110399522,-0.0506634463742309,-0.230460313958525,-0.400190700356389,-0.410902439127108,-0.410902439127108,-0.383621667454351,-0.367567987585844,-0.410902439127108,-0.410902439127108,-0.410902439127108,0.0113587348410937,-0.00704354066577235,-0.0920299780163448,-0.410902439127108,-0.410902439127108,-0.410902439127108,-0.038215208328902,0.00466492910692601,0.0656922752238862,-0.410902439127108,-0.396450582007424,-0.410902439127108,-0.123034100167557,-0.0329982517309462,0.661388951251579,0.572490716775037,0.378922335476637,0.347440546184663,0.536019324953318,0.495942576484964,0.541891561815817,0.34997471900512,0.311407337363481,0.264617489350188,-0.299564530718878,0.246481822699831,0.176565350019602,-0.410902439127108,0.061390186498263,-0.034264973569894,0.0674683179312001,0.753301047138379,0.593834250479763,0.537294515095213,0.0526070198214256,0.511139380563986,0.512955407425263,0.520864864702821,0.525963075646181,0.487375847098258,0.366975779419593,0.75455878962306,0.56376152775692,-0.0576803661359905,0.178109291006961,0.190869755669595,0.587654406458592,0.0690897597373988,-0.064880128677882,1.28304441321241,0.141471230322009,0.300012154150088,0.353778961344375,0.0503340189820676,0.0890389640762951,-0.410902439127108,0.0691319355309462,-0.204735061111441,-0.0515449839128301,-0.224102740892806,0.0665361814132334,0.39891636187862,0.258461858058106,0.265107250475022,-0.410902439127108,-0.410902439127108,-0.392926220791826,-0.30047243867509,-0.164936957065628,-0.274223168641851,-0.237768880587855,0.213266841455904,-0.410902439127108,-0.410902439127108,-0.375707803319551,-0.287679832033002,-0.336256719827377,-0.154360880756842,-0.0769342880482237,-0.391194540417131,0.476452835379748,0.499847163990563,0.552094401580628,-0.410902439127108,-0.38802737362279,-0.359531591266755,-0.280298228374606,-0.292336731173405,-0.219260791440281,-0.212236971124324,-0.099247183567086,0.123033105606153,-0.0796359598523718,-0.0609240446017056,0.242720231091017,0.323759003613785,0.34609870936959,0.572915856935655,-0.0273411109665607,-0.369313812145696,1.90106546268809,1.22663146095236,-0.410902439127108,-0.410902439127108,-0.321416725955475,-0.0673086711549755,0.319068322791898,0.56376776297887,1.15771120203314,0.861856914200611,0.948645820198673,0.925066480253151,0.956376496651812,1.0500158072672,1.16330352715438,1.15842153628484,-0.327078944780629,-0.187582536162478,-0.328956618015974,-0.353680387503764,-0.322617079994681,-0.192087039004801,-0.138639585190198,0.14877985974316,0.126885619958017,0.221489788130838,0.726013344958042,-0.394149136897574,-0.355421935000981,-0.292582403955284,-0.136750957631394,-0.0731639843408625,-0.00534279358542455,0.18019158965107,0.20514063965249,0.107120936572636,0.287229524621967,0.326761986599219,0.314993992176202,0.549052779734821,0.562265163394795,0.613094133260546,0.991831267651458,-0.410902439127108,-0.378119121215592,-0.292928993332549,-0.0389742278805055,0.196954570882644,0.582303319287643,0.655998133775197,0.351665428859565,0.363199051412976,0.360609937855671,0.841552863712477,0.720546234587892,0.963708460819947,1.09486342398438,0.966375148870329,1.76127589128631,1.68342868791789,0.114083948546478,-0.0941112032840357,0.403843687327816,0.365775869966437,-0.410902439127108,-0.375114473926658,-0.335595262219777,-0.410902439127108,-0.327213123840688,-0.383839298823703,-0.410902439127108,-0.410902439127108,-0.410902439127108,0.0283631051795607,0.504330284413162,-0.114737663852857,0.0160471520717162,0.684384615994262,0.316751675594098,-0.410902439127108,-0.282234327633777,-0.320023424224648,-0.167537533037745,-0.172171646905444,0.600656758462806,-0.0511989838740442,-0.17046718784589,0.332591558564403,0.150375518686127,0.334489973886894,0.098529011665713,-0.410902439127108,-0.372712409098729,-0.331821499558618,-0.246475864713034,-0.299747292942243,-0.279169434697784,0.00212807371630855,0.754066535812662,0.345813929415063,0.357140855735468,0.653848390081126,0.511940363947316,0.236801596652649,0.404620576127175,0.404133523526839,1.11544697057678,0.0140830758679193,0.456921267741972,0.16042015345747,0.258483200824032,0.0425703746132915,0.0918165168340884,0.132495250580615,-0.101030639218926,-0.052562118189254,-0.00677996704842845,0.33184776811038,-0.379016659091463,-0.211376443568242,-0.167523566671157,0.195406418291379,0.3816370932447,0.238639704443103,0.314194860218209,0.436965624059086,0.626461599320908,0.53906953666883,-0.0887622409219593,-0.309105058262911,-0.253906908301966,-0.181075732566467,-0.174689155256768,-0.149455387113243,-0.0288468226002709,-0.127974727097501,-0.135064104029305,-0.119828958642317,0.0899081646458336,0.201878738541433,-0.359319068902981,-0.276688494910932,-0.177629064367111,-0.198183407120539,-0.0275447656497279,-0.0798887386287816,-0.0414743891004335,-0.0274340372206159,-0.103592223898545,-0.0917610563778422,0.0845190588914467,-0.0043484959437779,0.0637918013965047,0.612511281553125,-0.410902439127108,-0.401574320791022,-0.39405245466411,0.414755333789876,0.786047484049992,0.736835202256735,0.771787084091886,0.194721179968976,-0.410902439127108,-0.340040354737901,-0.312552502304938,-0.376465837250273,-0.354247145762431,-0.349808793076475,-0.298892116526979,-0.16588559667726,-0.21747252938295,-0.288432764351387,-0.400181086237709,-0.410902439127108,-0.376673396677485,-0.26539299725295,-0.291819754520175,-0.053707637302604,0.0671898620262972,0.0594560055674771,0.0936959211990063,-0.00075615526509399,0.0794441326324571,0.0165326457008064,0.100228632981792,0.0474986167454945,0.0638305576932496,0.0852863595753733,0.0368723104163875,-0.000868114240182748,0.0545656770834896,0.0830006120750731,0.126439156976404,0.10662934538315,-0.00692280811763677,0.120200710127275,0.0371737005400123,0.04686826629497,0.0298786479148627,0.0713364728394103,0.0221245283464484,-0.157468086848056,-0.00277297948371975,0.0203497364228691,-0.0235735379345319,-0.0153427192662668,0.0440415489531751,-0.113678766541789,0.133415374061554,0.283152611175584,0.147665960178802,0.0953879592328918,0.0887776890954329
|coexpression_dpi_cluster_scores_median=-0.270287187668078,1.39897330460312,1.2615286925605,1.42011411104279,1.38442226592222,0.622082229702603,0.706725160270212,0.114374249893942,-0.0872319669881425,-0.082446195458804,-0.263265090190959,-0.396877178103613,-0.0940226903062832,-0.147050261874832,-0.0170311719066541,0.0482793130259551,0.0356836206611335,0.0247681444529239,0.0837895517343575,-0.0135813578985978,0.480550509576403,-0.241703489512927,-0.214343616255236,0.941295552812477,0.928683880398517,1.25373454690867,1.06776023486972,0.99021292579146,1.00376320340276,1.01668081055436,0.760455179159245,-0.386454408053531,-0.415819484932478,-0.415819484932478,0.0866278609485355,0.292246329713876,0.13928486143098,1.09394282581611,1.12627119259368,1.10960967024952,1.16695324484934,1.22590223824301,1.0807265505428,0.686422485996785,0.736802081963743,0.788926456311047,0.367152747216423,-0.337234656980853,-0.152438502271761,-0.268349568536056,0.250315293587542,-0.415819484932478,-0.382138483825504,0.0323618907075984,0.115273893235504,0.292053103878556,0.728369256176068,0.528585369822022,-0.415819484932478,-0.323617023345983,-0.415819484932478,-0.303463748116968,0.0394701986647492,0.734170634409462,0.788019954701634,0.644948702180555,-0.0446979787260207,-0.239498185679872,-0.394396007391041,-0.415819484932478,-0.415819484932478,-0.361257941586964,-0.372485033391214,-0.415819484932478,-0.415819484932478,-0.415819484932478,0.0377956763796638,-0.0455790025886582,-0.0938074721883056,-0.415819484932478,-0.415819484932478,-0.415819484932478,-0.037113716843108,-0.0591510084187255,0.0104712165084463,-0.415819484932478,-0.386915770693111,-0.415819484932478,-0.130408820741092,-0.0146182992017659,0.712966606202101,0.54192699281185,0.243223603023896,0.368173238526662,0.471574025772597,0.467402458005463,0.593246066668372,0.395415659692286,0.357080084421441,0.311317923078293,-0.290175066075559,0.285012008431967,0.199952678227841,-0.415819484932478,0.0551358072029525,-0.0334293463776105,0.0704572884840543,0.786701775960205,0.763238917175721,0.527371082390999,0.0350665016612193,0.543535354605942,0.448697784939606,0.494417633720957,0.582897994874855,0.442229015313824,0.315726136779033,0.789331653976041,0.605120885039075,-0.0606882553260925,0.216315365395489,0.246736899132872,0.615979147478633,0.0211189306385557,-0.0866834999850195,1.40753289119831,0.059955826631135,0.230380261096223,0.422371016524435,0.0999661248898248,0.0445351527145633,-0.415819484932478,0.0643543949336395,-0.233865714024643,-0.0443182283302412,-0.205733109175807,0.047152430702624,0.40459275499931,0.299282079327127,0.336116877731522,-0.415819484932478,-0.415819484932478,-0.415819484932478,-0.275959908108428,-0.211289389862161,-0.213082509982618,-0.223377280773792,0.252652438166155,-0.415819484932478,-0.415819484932478,-0.345430213317364,-0.279112462601722,-0.319801501295317,-0.170874471507746,-0.0821297532894945,-0.415819484932478,0.593125933863317,0.570178772320097,0.54465526943722,-0.415819484932478,-0.415819484932478,-0.349030213306063,-0.271138857727837,-0.250745990932758,-0.22422331581395,-0.161092417749541,-0.0930076967014219,0.130720619549457,-0.0207893762357722,0.00306781343902792,0.270191717307221,0.291541075820501,0.367862679584076,0.548815077954421,-0.0660344807273315,-0.373281531974336,1.9891247783294,1.37031815664094,-0.415819484932478,-0.415819484932478,-0.307824029859156,-0.103836614961239,0.165363138229869,0.535077952076309,1.20307685741122,0.946111358213369,1.06098870521173,1.11953986736353,1.13086275859025,1.15120047847839,1.14182180753656,1.15471129820703,-0.318007500669462,-0.200136863522361,-0.329325718087613,-0.341625731324785,-0.338832440359803,-0.186768682192961,-0.073917020831751,0.0908783684819525,0.12456918014836,0.22495046373744,0.653462780238448,-0.415819484932478,-0.376852426971959,-0.303865713179904,-0.147899013323086,-0.073774539514262,0.00384476011283441,0.181099626821744,0.212637713042242,0.153852080254396,0.359621105738152,0.323880250403525,0.284940107884341,0.550831741466463,0.520322961248812,0.536366053151229,1.02704057449521,-0.415819484932478,-0.383036167020963,-0.292395399145306,-0.0364954978007215,0.214999953345613,0.674609333947301,0.575955883844869,0.426192545798108,0.385115524528981,0.421445403114983,0.86435700749288,0.779191930068789,0.913613654590631,1.31112026825156,1.20912736618464,1.84452092149251,1.79424064473696,0.0919886293001941,-0.0794494310353719,0.439983360567859,0.398695287187427,-0.415819484932478,-0.415819484932478,-0.307568927396806,-0.415819484932478,-0.292118333927467,-0.415819484932478,-0.415819484932478,-0.415819484932478,-0.415819484932478,-0.0118608566751215,0.628733277469493,-0.136274199922053,0.0217136118300468,0.830974622079584,0.384810206218534,-0.415819484932478,-0.215842710109232,-0.271580246115427,-0.172454578843115,-0.0872319669881425,0.711379650564607,-0.0872319669881425,-0.127393442007529,0.371795951138351,0.139166397960001,0.434400030597482,0.0752123109624535,-0.415819484932478,-0.339439424875721,-0.328587517944335,-0.328587517944335,-0.328587517944335,-0.262429743468727,0.0053060457114736,0.689664535981249,0.309817630555604,0.351342195278952,0.683595777622167,0.611924746085107,0.280202826785544,0.441772543891563,0.389806611898872,1.23028619868475,0.0088113299314896,0.53158486471185,0.173164767412736,0.260538032229802,0.0100398239241646,0.0837711672124248,0.0735370136179972,-0.235778307683212,-0.114567329019203,-0.0444958033289639,0.408074655937675,-0.352047924861188,-0.189935843026814,-0.155421805090134,0.166619838797951,0.373745537875851,0.2415385754019,0.340179615702357,0.431250711620275,0.665334333905943,0.51753722020692,-0.0723272487017425,-0.314022104068281,-0.28491545475663,-0.190672727502125,-0.21255638767326,-0.107766100810539,-0.0662647468903382,-0.112076344951167,-0.0603181042739465,-0.115260258074228,0.07920127727931,0.203352906160516,-0.390050619861627,-0.311563100888504,-0.13006188806503,-0.166780026790593,-0.0478800919742038,-0.0550871759922842,-0.040383159532627,-0.0264048130591089,-0.0804723210159901,-0.0629428138717258,0.0779123898192968,-0.0250063264829125,0.045901720987848,0.642045885798272,-0.415819484932478,-0.397163248260306,-0.382119516006483,0.423100447363856,0.847963915609601,0.888350071721882,0.855432261354949,0.204153168632945,-0.415819484932478,-0.328587517944335,-0.317469548110308,-0.381382883055643,-0.379906773580527,-0.328587517944335,-0.30380916233235,-0.149464433413011,-0.187511629596648,-0.32521788884399,-0.415819484932478,-0.415819484932478,-0.347361400033232,-0.296881783833242,-0.283593260401752,-0.0208576627994475,0.07224881923415,0.0388239374231692,-0.00053308153229853,-0.000166710518150981,0.0547170416870057,-0.0166194415616865,0.0537353509537695,0.00434659655860305,0.0190157667878894,0.0363588213249572,0.0145375875874562,0.0159480992054024,-0.0120206485805671,0.0556284088969135,0.152600821586705,0.0527386316115659,-0.00819844299765105,0.0963424758462527,0.0269283742230619,0.0222356230726796,0.0176967516755124,0.080999270350502,-0.000575077176814751,-0.0872319669881425,-0.0230175110576965,0.000949572653699202,0.0208170436298292,-0.0184359122469267,0.0466573710145401,-0.109025897132352,0.113206184266573,0.284625997948299,0.190195941696827,0.147592906731516,0.0899939769330702
|gostat_on_MCL_coexpression=
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0007023!2.69e-10!51;UBERON:0000160!1.28e-09!31;UBERON:0004119!2.49e-09!118;UBERON:0000925!2.49e-09!118;UBERON:0006595!2.49e-09!118;UBERON:0005409!3.43e-09!47;UBERON:0001007!7.52e-09!116;UBERON:0001555!7.52e-09!116;UBERON:0007026!7.52e-09!116;UBERON:0004921!3.95e-08!114;UBERON:0004923!1.17e-07!24;UBERON:0000344!1.72e-07!15;UBERON:0005256!3.45e-07!45
|tfbs_overrepresentation_for_novel_motifs=0.641384,0.801438,0.612053,0.688265,0.483253,0.704257,0.803568,0.370124,0.993085,0.162942,0.755749,0.790506,0.37041,0.81685,1.2551,0,1.02248,0.473993,0.352304,0.683591,0.570433,0.197567,0.815872,0.481455,0.620553,0.846564,1.62441,0.727368,0.535752,0.290745,1.6946,1.12823,0.471365,0.318879,0.503207,0.30022,0.460474,0.786577,0.434783,0.40068,0.478558,0.717547,0.185353,0.504971,0.325217,0.675898,0.938241,0.744678,0.949442,0.539131,1.0041,0.875451,0.282443,1.2746,1.29252,0.82458,0.549352,0.776619,0.331485,0.822375,1.10737,0.885556,0.39557,0.992216,0.8366,1.03484,1.43193,1.78579,1.1025,1.63712,0.590754,0.377213,0.205546,1.32691,0.323563,0.310084,0.318792,0.926147,1.08947,0.575233,0.37865,1.04072,0.884013,0.362446,1.20828,0.11855,0.129654,0.290918,0.943446,1.94914,1.50286,1.21342,1.14153,0.490141,0.430015,0.409166,0.367176,1.14445,0.938512,0.264911,0.460566,1.12793,1.25667,1.00472,1.00361,0.717061,1.06633,0.740267,0.580757,0.57247,1.53136,1.25851,0.576517,0.7614,1.51002,1.1991,0.143825,0.692434,1.02384,0.456123,1.33244,0.970073,0.848526,0.925183,1.56496,1.09333,0.812403,1.13449,1.43038,0.493609,1.23918,0.680176,1.40022,0.839311,1.53196,0.195549,0.650785,0.719099,1.482,2.31884,1.91709,1.43673,0.861473,1.1391,0.996781,0.718046,0.941555,2.27909,0.653418,0.485304,0.79777,0.184289,1.27621,0.416214,0.838313,1.35996,0.87653,0.516549,0.63863,0.650472,1.49167,1.20739,1.09379,0.630949,0.993294,0.830321,1.16191,0.788782,0.0824127
}}

Latest revision as of 17:48, 17 September 2013


Phase1 CAGE Peaks

 Short description
Mm9::chr11:69497991..69498009,+p1@ENSMUST00000145435
Mm9::chr17:74249143..74249147,-p@chr17:74249143..74249147
-
Mm9::chr17:74299477..74299492,-p1@Xdh
Mm9::chr17:74299512..74299529,-p2@Xdh


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

no results for this coexpression

Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br><br>uberon_data<br><br>

Uber Anatomy
Ontology termp-valuen
adult organism2.69e-1051
intestine1.28e-0931
endoderm-derived structure2.49e-09118
endoderm2.49e-09118
presumptive endoderm2.49e-09118
gastrointestinal system3.43e-0947
digestive system7.52e-09116
digestive tract7.52e-09116
primitive gut7.52e-09116
subdivision of digestive tract3.95e-08114
organ component layer1.17e-0724
mucosa1.72e-0715
trunk mesenchyme3.45e-0745


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)
MA0003.10.142214
MA0004.10.6888
MA0006.10.497533
MA0007.10.672186
MA0009.11.15569
MA0014.10.0809287
MA0017.10.528196
MA0019.10.964875
MA0024.11.11019
MA0025.11.39562
MA0027.12.81824
MA0028.10.509589
MA0029.11.08753
MA0030.11.09438
MA0031.11.05719
MA0038.10.846479
MA0040.11.16866
MA0041.10.604221
MA0042.10.589368
MA0043.11.25564
MA0046.11.1929
MA0048.10.735223
MA0050.10.731539
MA0051.10.856094
MA0052.11.17701
MA0055.10.396346
MA0056.10
MA0057.10.251896
MA0058.10.581673
MA0059.10.59559
MA0060.11.83511
MA0061.10.438628
MA0063.10
MA0066.10.834648
MA0067.11.50873
MA0068.10.256913
MA0069.11.17737
MA0070.11.16732
MA0071.10.73062
MA0072.11.15853
MA0073.10.00221226
MA0074.10.795862
MA0076.10.550092
MA0077.11.13603
MA0078.10.891476
MA0081.10.621611
MA0083.11.25482
MA0084.11.84013
MA0087.11.21037
MA0088.10.582815
MA0089.10
MA0090.11.56748
MA0091.10.703314
MA0092.10.651119
MA0093.10.519148
MA0095.10
MA0098.10
MA0100.11.84237
MA0101.10.605676
MA0103.10.540576
MA0105.10.313353
MA0106.10.899777
MA0107.10.533522
MA0108.20.989014
MA0109.10
MA0111.10.666525
MA0113.10.869608
MA0114.10.43587
MA0115.11.25852
MA0116.10.497293
MA0117.11.22527
MA0119.10.606338
MA0122.11.24573
MA0124.11.45461
MA0125.11.37907
MA0130.10
MA0131.10.960068
MA0132.10
MA0133.10
MA0135.11.29308
MA0136.10.817395
MA0139.10.365453
MA0140.10.78318
MA0141.11.38335
MA0142.11.04199
MA0143.10.887119
MA0144.11.11951
MA0145.10.21199
MA0146.10.313734
MA0147.10.453952
MA0148.10.706718
MA0149.10.611881
MA0062.20.319836
MA0035.20.788288
MA0039.20.0959929
MA0138.20.951653
MA0002.20.368961
MA0137.20.559766
MA0104.20.386166
MA0047.20.845655
MA0112.20.211985
MA0065.21.14711
MA0150.10.67206
MA0151.10
MA0152.10.84577
MA0153.11.31015
MA0154.10.263609
MA0155.10.230016
MA0156.10.549102
MA0157.11.0083
MA0158.10
MA0159.10.465802
MA0160.10.71003
MA0161.10
MA0162.10.10667
MA0163.10.0996272
MA0164.10.817786
MA0080.20.534538
MA0018.20.828253
MA0099.20.944966
MA0079.20.00774881
MA0102.21.8929
MA0258.10.419871
MA0259.10.441366
MA0442.10
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MCL_coexpression_mm9:1984&oldid=3073983"