FFCP PHASE1:Hg19::chr1:145525001..145525012,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8515 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6135 | |||
|TSSclassifier=strong | |||
|UniProt=B2RTV5 | |||
|association_with_transcript=-3bp_to_ENST00000539363_5end | |||
|description=CAGE_peak_2_at_ITGA10_5end | |||
|id=chr1:145525001..145525012,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.28e-19!180;CL:0000680!2.02e-11!57;CL:0000056!2.02e-11!57;CL:0000355!2.02e-11!57;CL:0000183!6.02e-10!59;CL:0000187!7.34e-10!54;CL:0000222!9.17e-09!119;CL:0000071!1.91e-08!18;CL:0002546!1.91e-08!18;CL:0000188!2.80e-08!9;CL:0002139!7.49e-08!24;CL:0000393!8.43e-08!60;CL:0000211!8.43e-08!60;CL:0000057!1.48e-07!75;CL:1000413!3.74e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:1000413;1.91e-14;9!CL:0000062;4.73e-11;9!CL:0000071;7.76e-11;18!CL:0002551;1.31e-10;6!CL:0000188;3.80e-10;9!CL:0000680;9.63e-10;7!CL:0000594;3.75e-09;3!CL:0002564;7.60e-09;3!CL:0000708;1.73e-08;3!CL:0002544;7.96e-08;6!CL:0002139;1.11e-07;24!CL:0002540;4.23e-07;6!CL:0002549;5.43e-07;2!CL:0002575;6.18e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000413,2.06e-14,9;CL:0000071,8.66e-11,18;CL:0002546,8.66e-11,18;CL:0002551,1.12e-10,6;CL:0000188,2.88e-10,9;CL:0000594,2.30e-09,3;CL:0002564,5.85e-09,3;CL:0000708,8.76e-09,3;CL:0000062,9.74e-09,11;CL:0000375,9.74e-09,11;CL:0000335,9.74e-09,11;CL:0002544,4.86e-08,6;CL:0002139,1.20e-07,24;CL:0002540,3.79e-07,6;CL:0002549,4.47e-07,2;CL:0000680,7.94e-07,58;CL:0000056,7.94e-07,58;CL:0000355,7.94e-07,58;CL:0002575,8.36e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002546;7.76e-11;18!CL:0000335;6.84e-09;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.31e-17!83;UBERON:0002329!2.31e-17!83;UBERON:0003077!2.31e-17!83;UBERON:0003059!2.31e-17!83;UBERON:0007282!2.31e-17!83;UBERON:0009618!2.31e-17!83;UBERON:0007285!2.31e-17!83;UBERON:0004290!1.31e-14!70;UBERON:0002049!1.58e-14!79;UBERON:0007798!1.58e-14!79;UBERON:0000119!2.69e-14!312;UBERON:0000483!4.96e-13!309;UBERON:0000477!1.68e-12!286;UBERON:0002385!4.64e-12!63;UBERON:0001015!4.64e-12!63;UBERON:0000383!4.64e-12!63;UBERON:0000486!1.84e-11!82;UBERON:0001134!2.01e-11!61;UBERON:0002036!2.01e-11!61;UBERON:0003082!2.01e-11!61;UBERON:0000481!4.55e-11!347;UBERON:0000475!5.38e-11!365;UBERON:0000153!6.51e-11!129;UBERON:0007811!6.51e-11!129;UBERON:0000033!1.05e-10!123;UBERON:0001009!1.29e-10!113;UBERON:0004872!2.01e-10!84;UBERON:0004535!2.55e-10!110;UBERON:0001981!4.42e-10!60;UBERON:0007500!4.42e-10!60;UBERON:0004537!4.42e-10!60;UBERON:0006965!4.42e-10!60;UBERON:0000055!5.31e-10!69;UBERON:0000025!2.32e-09!194;UBERON:0000468!3.27e-09!659;UBERON:0004111!6.69e-09!241;UBERON:0000955!1.08e-08!69;UBERON:0006238!1.08e-08!69;UBERON:0007023!1.16e-08!115;UBERON:0002616!1.40e-08!59;UBERON:0001986!1.91e-08!18;UBERON:0004638!1.91e-08!18;UBERON:0004852!1.91e-08!18;UBERON:0000923!3.54e-08!604;UBERON:0005291!3.54e-08!604;UBERON:0006598!3.54e-08!604;UBERON:0002532!3.54e-08!604;UBERON:0002050!4.48e-08!605;UBERON:0005423!4.48e-08!605;UBERON:0004121!6.36e-08!169;UBERON:0001637!9.59e-08!42;UBERON:0003509!9.59e-08!42;UBERON:0004572!9.59e-08!42;UBERON:0000922!1.00e-07!612;UBERON:0001017!1.37e-07!82;UBERON:0000479!1.85e-07!787;UBERON:0000924!2.64e-07!173;UBERON:0006601!2.64e-07!173;UBERON:0005743!3.04e-07!86;UBERON:0003915!3.74e-07!9;UBERON:0004700!3.74e-07!9;UBERON:0001917!3.74e-07!9;UBERON:0000467!4.10e-07!625;UBERON:0000480!5.11e-07!626;UBERON:0000490!5.37e-07!138;UBERON:0000487!7.47e-07!22;UBERON:0000073!7.95e-07!94;UBERON:0001016!7.95e-07!94;UBERON:0003075!8.68e-07!86;UBERON:0007284!8.68e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0004765;1.38e-17;26!UBERON:0003915;1.91e-14;9!UBERON:0004700;1.91e-14;9!UBERON:0001917;1.91e-14;9!UBERON:0011135;1.19e-13;5!UBERON:0002216;1.19e-13;5!UBERON:0011134;1.19e-13;5!UBERON:0002209;1.19e-13;5!UBERON:0002213;1.19e-13;5!UBERON:0007844;1.19e-13;5!UBERON:0011138;1.19e-13;5!UBERON:0001130;1.19e-13;5!UBERON:0001066;1.19e-13;5!UBERON:0001468;1.19e-13;5!UBERON:0001434;2.17e-11;36!UBERON:0001474;5.75e-11;18!UBERON:0004638;7.76e-11;18!UBERON:0001986;7.76e-11;18!UBERON:0004852;7.76e-11;18!UBERON:0002067;9.84e-10;9!UBERON:0005284;1.58e-09;5!UBERON:0002418;2.85e-09;3!UBERON:0004755;2.85e-09;3!UBERON:0002242;7.60e-09;3!UBERON:0000487;1.54e-08;22!UBERON:0003210;1.73e-08;3!UBERON:0004905;2.21e-08;8!UBERON:0000982;2.21e-08;8!UBERON:0004770;2.21e-08;8!UBERON:0006914;2.64e-07;25!UBERON:0001134;2.69e-07;16!UBERON:0002036;2.69e-07;16!UBERON:0002204;3.42e-07;70!UBERON:0005629;5.43e-07;2!UBERON:0005358;5.43e-07;2!UBERON:0001886;5.43e-07;2!UBERON:0004086;5.43e-07;2!UBERON:0005282;5.43e-07;2!UBERON:0005281;5.43e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003915,2.06e-14,9;UBERON:0004700,2.06e-14,9;UBERON:0001917,2.06e-14,9;UBERON:0011135,9.51e-14,5;UBERON:0002216,9.51e-14,5;UBERON:0011134,9.51e-14,5;UBERON:0002209,9.51e-14,5;UBERON:0002213,9.51e-14,5;UBERON:0005856,9.51e-14,5;UBERON:0005866,9.51e-14,5;UBERON:0005863,9.51e-14,5;UBERON:0007844,9.51e-14,5;UBERON:0011138,9.51e-14,5;UBERON:0001130,9.51e-14,5;UBERON:0001066,9.51e-14,5;UBERON:0001468,9.51e-14,5;UBERON:0002329,5.89e-11,71;UBERON:0003059,5.89e-11,71;UBERON:0007282,5.89e-11,71;UBERON:0004290,5.89e-11,71;UBERON:0009618,5.89e-11,71;UBERON:0004638,8.66e-11,18;UBERON:0001986,8.66e-11,18;UBERON:0004852,8.66e-11,18;UBERON:0003077,9.87e-11,72;UBERON:0007285,9.87e-11,72;UBERON:0007524,1.63e-10,73;UBERON:0000490,6.36e-10,148;UBERON:0002049,6.55e-10,78;UBERON:0007798,6.55e-10,78;UBERON:0002067,8.99e-10,9;UBERON:0004016,8.99e-10,9;UBERON:0010083,8.99e-10,9;UBERON:0005284,1.56e-09,5;UBERON:0007503,1.63e-09,78;UBERON:0002418,2.95e-09,3;UBERON:0004755,2.95e-09,3;UBERON:0002242,5.85e-09,3;UBERON:0003068,5.85e-09,3;UBERON:0002328,5.85e-09,3;UBERON:0004880,5.85e-09,3;UBERON:0003210,8.76e-09,3;UBERON:0000486,1.22e-08,83;UBERON:0000487,1.68e-08,22;UBERON:0004905,1.93e-08,8;UBERON:0000982,1.93e-08,8;UBERON:0004770,1.93e-08,8;UBERON:0007500,8.25e-08,59;UBERON:0001981,8.25e-08,59;UBERON:0004537,8.25e-08,59;UBERON:0006965,8.25e-08,59;UBERON:0006914,2.84e-07,25;UBERON:0000055,3.12e-07,68;UBERON:0004535,4.02e-07,109;UBERON:0005629,4.47e-07,2;UBERON:0005358,4.47e-07,2;UBERON:0001886,4.47e-07,2;UBERON:0004086,4.47e-07,2;UBERON:0005282,4.47e-07,2;UBERON:0005281,4.47e-07,2;UBERON:0003104,5.18e-07,160;UBERON:0009142,5.18e-07,160;UBERON:0001637,7.40e-07,42;UBERON:0003509,7.40e-07,42;UBERON:0004572,7.40e-07,42;UBERON:0004872,8.17e-07,83;UBERON:0001009,8.60e-07,112;UBERON:0002204,8.82e-07,167 | |||
|phase1_expression=0,1.07050261945492,0.281908808191942,0,0,0,0,0,0,0,0,0,0.263766978228454,3.83675694176145,1.32558950291166,0,1.80808358407193,0.730310090387373,0.487932798790507,0.123121058076788,0.408001382488506,0.940364164434263,0,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.144846518960824,0,4.37971383272372,0.189069634328136,0.886917589850256,0.263504357079378,0.392937226493138,0,0,0,0,0,0,0,0,1.98762407366705,0.860234595106124,2.77712401286075,4.52246353539208,2.09749718104953,1.10047216776027,2.08994966536811,0,0,0,0.805658634218294,0,2.4406205754817,0,4.0507097394088,0.982297011124877,0.898117490504679,1.23872628531654,0,0,0.549605231791222,0,0,0,0,0.506522046658319,0.132409180813219,0,0.709336764396714,0,0,0.24666754841716,0.622422070799533,0.942974704487816,1.14423332179421,2.72443369760877,9.21881479167998,0.70296429550139,1.5608003841516,0.570471821544449,2.09228152772521,1.64408298101271,1.61872944368132,1.26405726032024,1.63323337003915,2.21101771161182,1.54988671763648,0,0,0,1.43723628363248,2.69337782326506,0.875829639103749,0.554128230968366,0.438977620880838,0.919463387397059,0.150238058906597,0.340296549480063,0,0,0,0,0,0.257640540045629,0,0.506328996723799,0.0974370051611986,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0.234817388471643,0.721832238805369,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0,0.358234090811393,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,1.45770409648969,1.74384027533312,2.7868548611961,0,0,0,0,0,1.54324424557285,0,1.0656887160644,0.142977993658148,0.542621605391443,0,0.65147236858747,1.06617584622764,0,0,0.871533458600294,0,0,0,0,0.239624855491583,0,1.42636905040718,0.723906533337896,0.821905290201534,2.14873155887875,0,0,0,0,0,0,0,0,0,0,0,0,1.47229790062968,2.50085260529839,2.44138521329762,0,0,0,0.117141414992713,4.21324539618807,2.27407504055985,1.03473071292505,0.664225598535437,0.921845842708516,0.0868836144680828,5.09083009403126,2.05886054286514,0,0,0,0,1.66435439510497,0.30239029332968,0.248107807818777,1.2276957863045,0.841980283299221,0,0.511707249066704,0,0,0,0,0.410635780069046,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66277859273374,6.8482884934088,0,0,0,1.16004861950546,0.770243085573222,0.921022048356777,1.65403886981437,3.43744783578476,3.33538396002726,1.87498580315422,0.445160178233687,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,1.73986598415015,0.37064843820784,0,6.32669227911434,1.2655176988749,0.38126038784765,0.255897791311334,0.855877976067841,0.95460974377781,0,0.539617372749944,0.274537029736055,0.117812402345686,0,0,0,0,0.487426979262569,0,0,0,2.26016233240486,0.551365343546124,0,0,1.73632660280006,1.31178950409327,0,0.92947049429925,1.69017361519345,0.717056761020258,0.196498082026242,0.35667105148125,0.354761064070598,0.844430541190656,0,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0,0,5.97743964753209,0,0,0,0,0,0,0,0,0.197286811273867,0,2.22273980289274,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331737779793674,0,0.219385397153973,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.269604531922708,0,0.468528891450678,0,0,0.242780379534093,0,0,0.30607276163049,2.90658266291045,0,0,0,1.65495977937749,0.313932918407225,0,0,0,0,0,0,0,3.26773461696071,0,0,0,0.0969890164884194,6.70746562855402,0,1.09633539717401,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0.407712618220842,0.104602846312333,0,0.288950589901519,0,0.136905378891993,0,0,0,1.11712960508902,1.14580212005842,0,0.199679000498991,0,0.446342914883745,1.14211903227435,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0.394028536495991,0.262272940674991,0.844802692155252,0.179287339332845,0,0,0.662091970365432,0,0,0,0,0,0,0.851940108927109,0.113312091520126,0,0,0.129282956361551,0.66116300871345,0,0,0.854299300541557,0.314408610199332,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0,0.573409195690071,0.554645257684261,0.869349641179368,0,0.124980407962107,0,0,0,0,0,0.149254802886874,0.233713309847224,0,2.65164207385125,0.754703705257725,1.77962244319307,0,0,0,0.295710299979268,0.159296767163702,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,2.40016658797892,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.920529751259204,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.128458450192919,0,0.478901577171454,0,0.252071696221718,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,2.18807844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| |||
|short_description=p2@ITGA10 | |||
}} |
Revision as of 20:32, 10 January 2014
Short description: | p2@ITGA10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ITGA10_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_ENST00000539363_5end |
EntrezGene: | ITGA10 |
HGNC: | 6135 |
UniProt: | B2RTV5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of artery | 2.06e-14 | 9 |
blood vessel endothelial cell | 8.66e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.66e-11 | 18 |
fibroblast of dermis | 1.12e-10 | 6 |
cell of skeletal muscle | 2.88e-10 | 9 |
skeletal muscle satellite cell | 2.30e-09 | 3 |
nucleus pulposus cell of intervertebral disc | 5.85e-09 | 3 |
leptomeningeal cell | 8.76e-09 | 3 |
osteoblast | 9.74e-09 | 11 |
osteoprogenitor cell | 9.74e-09 | 11 |
mesenchyme condensation cell | 9.74e-09 | 11 |
aortic endothelial cell | 4.86e-08 | 6 |
endothelial cell of vascular tree | 1.20e-07 | 24 |
mesenchymal stem cell of the bone marrow | 3.79e-07 | 6 |
fibroblast of choroid plexus | 4.47e-07 | 2 |
muscle precursor cell | 7.94e-07 | 58 |
myoblast | 7.94e-07 | 58 |
multi-potent skeletal muscle stem cell | 7.94e-07 | 58 |
central nervous system pericyte | 8.36e-07 | 2 |