FFCP PHASE1:Hg19::chr1:150979129..150979140,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55793 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25648 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N5J2,D3DV11 | |||
|association_with_transcript=132bp_to_NM_001163259,NM_001163260,uc001ewc.2,uc010pcm.1_5end | |||
|description=CAGE_peak_10_at_FAM63A_5end | |||
|id=chr1:150979129..150979140,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.55e-12;3!CL:0000094;7.02e-12;8!CL:0000081;1.54e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.45e-12,3;CL:0000094,8.19e-12,8;CL:0000081,1.72e-08,11 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.04e-11;3!UBERON:0003057;1.04e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.11e-25!115;UBERON:0001049!1.43e-10!57;UBERON:0005068!1.43e-10!57;UBERON:0006241!1.43e-10!57;UBERON:0007135!1.43e-10!57;UBERON:0001017!3.05e-09!82;UBERON:0000955!4.47e-09!69;UBERON:0006238!4.47e-09!69;UBERON:0003075!4.52e-09!86;UBERON:0007284!4.52e-09!86;UBERON:0005743!8.04e-09!86;UBERON:0002616!8.35e-09!59;UBERON:0000073!4.44e-08!94;UBERON:0001016!4.44e-08!94;UBERON:0002346!5.56e-08!90;UBERON:0000153!6.31e-08!129;UBERON:0007811!6.31e-08!129;UBERON:0002298!1.53e-07!8;UBERON:0000033!5.75e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.85e-15;15!UBERON:0000179;2.85e-15;15!UBERON:0000463;2.85e-15;15!UBERON:0002240;1.04e-11;3!UBERON:0005174;1.04e-11;3!UBERON:0001137;1.04e-11;3!UBERON:0002298;2.23e-10;6!UBERON:0002148;2.12e-08;2!UBERON:0006331;2.12e-08;2!UBERON:0009662;2.12e-08;2!UBERON:0005162;2.55e-08;2!UBERON:0000122;2.55e-08;2!UBERON:0004732;4.28e-07;13!UBERON:0000125;5.49e-07;9!UBERON:0002308;5.49e-07;9!UBERON:0007023;5.92e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.22e-22,114;UBERON:0000178,2.67e-15,15;UBERON:0000179,2.67e-15,15;UBERON:0000463,2.67e-15,15;UBERON:0002240,9.06e-12,3;UBERON:0005174,9.06e-12,3;UBERON:0001137,9.06e-12,3;UBERON:0003076,2.38e-11,15;UBERON:0003057,2.38e-11,15;UBERON:0003075,2.55e-11,82;UBERON:0007284,2.55e-11,82;UBERON:0001049,3.36e-11,56;UBERON:0005068,3.36e-11,56;UBERON:0006241,3.36e-11,56;UBERON:0007135,3.36e-11,56;UBERON:0002346,1.36e-10,86;UBERON:0002298,2.45e-10,6;UBERON:0010371,4.22e-09,104;UBERON:0005162,1.87e-08,2;UBERON:0000122,1.87e-08,2;UBERON:0002148,2.25e-08,2;UBERON:0006331,2.25e-08,2;UBERON:0009662,2.25e-08,2;UBERON:0010314,7.70e-08,132;UBERON:0001017,1.20e-07,81;UBERON:0001016,1.37e-07,89;UBERON:0000073,2.08e-07,53;UBERON:0002616,2.08e-07,53;UBERON:0004732,4.42e-07,13;UBERON:0000125,5.51e-07,9;UBERON:0002308,5.51e-07,9 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0.631719873426831,0.522371256399677,0.245733936501509,0,0,0,0.37129905888014,0.331397375727916,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,1.18009283054671,0,0.464448369948228,0,0,0,0.0774672005803016,0,0,0.553995408531877,0.200544447470142,0,0.447830948479849,0,0.77272670290256,1.16318591023652,0.377875943688809,1.94067248950253,0.232429036905685,0,0.619412741790207,0,0.256160706529101,0.236482229888585,1.03423704220986,0,0,0.941211697713023,0.272906150057846,0.224723484445085,0.306083892370903,0,1.91801137739712,0.329851300186716,0,0,0.870627715885752,0,0.622822248995575,0,0,0.217188844705117,0.605399502633369,0.368277635987565,0,0,0,0,1.34794357375794,0.150176892841506,0.803627933485401,0,0,0,0,0.546138611262131,0,0.426730222566507,0,0.574752439954483,0,0,0.569212969109448,0,0,0,0,0,1.180258620683,1.57204305099666,0,0.167186495390678,0.32592226663359,0,0,0.334231370655521,0,0.443067789167242,0.270803863765016,1.0247305578054,0.520237390239513,0.822189523018381,0.552700035571697,0.579606171470105,1.33457906845854,0.535081656179426,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0.318565414324097,1.30216690771284,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0,0,0.289648807765598,0,0,0,0,0,0.144846518960824,0,0,1.22895262313288,0.221729397462564,0.351339142772504,0.458426764241994,0.364295288292542,0.370784442784429,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,3.87780264148325,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0.408308342509787,0.368502951935304,0.413303124703062,0,0,0,0,0,0,0,0,0.30648779579902,0.300476117813194,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,1.02940686179115,0.219500570817251,0,0.100528972411631,0,0,0,0,0.927443239800615,0,0,0,0,0,0.858486162094873,0.246217006087397,0.468008530278475,0.594524649154913,0.93733833986777,0,0,0.0895585227028483,0.290633938513962,0.383382679165211,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0.253991577168676,0,1.17217447210047,0,0,0.300343057843917,1.71495859578347,0,0,0,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0.502257091432126,0,0,0,0,0,0,0,0.112085143993527,0,0.215627574859517,0.256686072559497,0.254094624222463,0,0,0,0,9.73709131131337,2.99161459204025,4.14415513436035,0.24538298343828,0,0,0.207970861530807,0.178428988797162,0,0.35142424497814,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0.431428401637234,0.320182673410333,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0.246381468041427,0,0,0,0.802025881213139,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.309123034943167,0.27470839445503,0,0.574265537996172,0.650060246036521,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0.178064071293475,0,0,0.127612712494584,0,0,0,0,0,0,0,0.18532421910392,0,0.372158369359667,0,0.190630193923825,0.511795582622668,0,0,0,0,0,0.117812402345686,0,0,0.421258456238981,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,3.04468565539302,2.29391162142713,5.69647187174163,4.04994018278241,3.29089818468955,0,1.62009431171434,10.3106272918255,0.106824071127473,0,0,0,0,0,0.159426272728822,0.199579371432817,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0.223676107892416,0,0,0,0,0.270455678475983,0,0,0,0,0.36408156524854,0,11.0813097254501,0,0,0,0,0.984685914873589,0,0.824019371133798,0,0.19924798825107,0.552567831062295,0,0.20453736500431,0,0,0,0,0,0.295930216910801,2.3948309234694,0,0.969332746095218,0.185536196323703,0,0.260427761085233,0,0.724999575434793,0.1137934482855,0.254253650292766,0.945550727071745,0,0,0,0,0.482385754501632,0,0.663475559587348,0.886642856860642,0.219385397153973,0,0.278847488557207,1.23120413606075,0,0,0.0897576444097721,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.265372693510018,0,0,0,0,1.48282492557489,0,0.468528891450678,0,0,0.485560759068186,0,0,0,1.01098527405581,0,0.103688191397247,0,0,0,0,0,0,0,0,0.174118413160805,0.34945333648406,0,0,0,0,0.484945082442097,0.0882561266915003,0.90392296312213,0,0.19871461170299,0.316553979779393,0.195551382734803,0.160317640503067,0.426905989478705,0,0.288180834308212,0.229073192331831,0,0,0,0.235694034616795,0.407712618220842,0.523014231561666,0.713987523454252,0,0,4.79168826121976,0,0,0.262887354279314,0.279282401272254,0,0,0,0.429226048136571,0.223171457441873,0.268733889946905,0.360299883542404,0,0.157566364614447,0.576911008668165,0.26961417541674,0,0,0,1.36203406111576,0,0,0,0,0.77380195455795,0.485996453264197,0,1.81253126788156,0.419636705079985,0.316801009558219,0,0,0,0,0.25426853765475,0,0,0,0,0.082092520749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| |||
|short_description=p10@FAM63A | |||
}} |
Revision as of 20:46, 10 January 2014
Short description: | p10@FAM63A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_FAM63A_5end |
Coexpression cluster: | NA |
Association with transcript: | 132bp_to_NM_001163259, NM_001163260, uc001ewc.2, uc010pcm.1_5end |
EntrezGene: | FAM63A |
HGNC: | 25648 |
UniProt: | Q8N5J2D3DV11 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.45e-12 | 3 |
granulocyte | 8.19e-12 | 8 |
blood cell | 1.72e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.22e-22 | 114 |
blood | 2.67e-15 | 15 |
haemolymphatic fluid | 2.67e-15 | 15 |
organism substance | 2.67e-15 | 15 |
spinal cord | 9.06e-12 | 3 |
dorsal region element | 9.06e-12 | 3 |
dorsum | 9.06e-12 | 3 |
posterior neural tube | 2.38e-11 | 15 |
chordal neural plate | 2.38e-11 | 15 |
neural plate | 2.55e-11 | 82 |
presumptive neural plate | 2.55e-11 | 82 |
neural tube | 3.36e-11 | 56 |
neural rod | 3.36e-11 | 56 |
future spinal cord | 3.36e-11 | 56 |
neural keel | 3.36e-11 | 56 |
neurectoderm | 1.36e-10 | 86 |
brainstem | 2.45e-10 | 6 |
ecto-epithelium | 4.22e-09 | 104 |
multi cell component structure | 1.87e-08 | 2 |
neuron projection bundle | 1.87e-08 | 2 |
locus ceruleus | 2.25e-08 | 2 |
brainstem nucleus | 2.25e-08 | 2 |
hindbrain nucleus | 2.25e-08 | 2 |
structure with developmental contribution from neural crest | 7.70e-08 | 132 |
central nervous system | 1.20e-07 | 81 |
nervous system | 1.37e-07 | 89 |
regional part of nervous system | 2.08e-07 | 53 |
regional part of brain | 2.08e-07 | 53 |
segmental subdivision of nervous system | 4.42e-07 | 13 |
neural nucleus | 5.51e-07 | 9 |
nucleus of brain | 5.51e-07 | 9 |