FFCP PHASE1:Hg19::chr1:174846403..174846426,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9910 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24663 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-103bp_to_uc001gkh.3_5end | |||
|coexpression_cluster_id=C3906 | |||
|description=CAGE_peak_22_at_RABGAP1L_5end | |||
|id=chr1:174846403..174846426,+ | |||
|ontology_enrichment_celltype=CL:0000791!5.37e-15!18;CL:0000789!5.37e-15!18;CL:0002420!5.37e-15!18;CL:0002419!5.37e-15!18;CL:0000790!5.37e-15!18;CL:0000625!1.02e-10!11;CL:0000084!1.17e-09!25;CL:0000827!1.17e-09!25;CL:0000542!1.40e-07!53;CL:0000051!1.40e-07!53;CL:0000624!5.05e-07!6;CL:0000838!7.25e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000785;7.26e-08;1!CL:0000819;7.26e-08;1!CL:0000167;3.10e-07;1!CL:0000164;3.10e-07;1!CL:0000502;3.10e-07;1!CL:0000172;3.10e-07;1!CL:0000895;3.10e-07;1!CL:0000173;3.10e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,7.03e-08,1;CL:0000810,2.50e-07,1;CL:0000895,2.50e-07,1;CL:0002436,2.50e-07,1;CL:0002427,2.50e-07,1;CL:0002428,2.50e-07,1;CL:0002429,2.50e-07,1;CL:0002433,2.50e-07,1;CL:0002431,2.50e-07,1;CL:0002432,2.50e-07,1;CL:0000167,2.83e-07,1;CL:0000164,2.83e-07,1;CL:0000502,2.83e-07,1;CL:0000172,2.83e-07,1;CL:0000173,2.83e-07,1;CL:0002351,2.83e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002351;3.10e-07;1!CL:0002427;3.10e-07;1!UBERON:0006242;3.10e-07;1 | |||
|ontology_enrichment_disease=DOID:1036!1.12e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;7.11e-13;8!DOID:8692;2.15e-09;31!DOID:1240;4.25e-08;39!DOID:0060073;7.26e-08;1!DOID:8675;7.26e-08;1!DOID:8552;1.07e-07;1!DOID:12603;3.10e-07;1!DOID:4430;3.10e-07;1!DOID:2531;5.54e-07;51!DOID:0060083;5.54e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,6.80e-13,8;DOID:8692,4.39e-09,31;DOID:1240,4.78e-09,39;DOID:2531,1.88e-08,51;DOID:0060083,1.88e-08,51;DOID:0060073,7.03e-08,1;DOID:8675,7.03e-08,1;DOID:8552,9.71e-08,1;DOID:4430,2.83e-07,1;DOID:12603,3.84e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.42e-18!115;UBERON:0002791!2.86e-08!33;UBERON:0001893!6.53e-08!34;UBERON:0002020!6.57e-08!34;UBERON:0003528!6.57e-08!34;UBERON:0001049!8.58e-08!57;UBERON:0005068!8.58e-08!57;UBERON:0006241!8.58e-08!57;UBERON:0007135!8.58e-08!57;UBERON:0002780!1.24e-07!41;UBERON:0001890!1.24e-07!41;UBERON:0006240!1.24e-07!41;UBERON:0003080!2.39e-07!42;UBERON:0005409!2.85e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;3.23e-11;4!UBERON:0000160;3.76e-08;17!UBERON:0001000;3.10e-07;1!UBERON:0005352;3.10e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,3.80e-11,4;UBERON:0000160,3.73e-08,17;UBERON:0001000,2.35e-07,1;UBERON:0005352,2.35e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0.434021741431704,0.223915474239924,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590129310341499,0.393010762749165,1.85041349099558,0,0,0,0,11.6980979729432,0.883817722424512,0.221533894583621,1.35401931882508,2.5618263945135,5.85267064019452,0.328875809207352,0.276350017785848,0.289803085735052,0.14828656316206,0,0,0.793165398882963,1.53288197440768,2.40539211837841,2.02415753615602,0.95569624297229,0.651083453856419,0.950452044448374,1.05402583354441,0.76791966692651,0,0.473554504088034,2.46338399076314,0.604820229674197,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0.704387472105808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,1.52927441428475,0,0.952927101831156,0,1.29694662238543,0.540031437238115,0,0,0,0,1.11481905075431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,4.92349595790849,0.270455678475983,0,1.4098700508785,0.37428108081644,0,0,0,0,0,0.593929361665277,0.614321404198464,0,0.281338832821026,0,0,0,0,0.552567831062295,0,0,0,0,0.179736702294654,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,0.23056390438806,0,0,0.31900115973192,0,0,0,0,3.98908036560375,4.06072189110925,3.92125068635479,3.18861015254101,2.46679852541441,0.953619473882272,0,0,0,0,0,0.707660516026713,3.05515072466813,0.296521128680622,0,0,0.134802265961354,0.802577647298789,0,6.75082720097964,0,0,1.57833761139756,2.41981432097328,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,1.28071796843612,0,0.576361668616424,0,2.4023299700675,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.558564802544508,0,0,0,0,0,0,0,0,0,0,0,0.393709926058995,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0.129282956361551,0,0,0,0.427149650270779,0.314408610199332,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,0,0.886068179966986,0.366078794705889,0.250381861413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.676892955143315,0,6.25211208986474,0,0,0.443568258651136,0,0,0,0,0,0.548257766857182,0,0,0.127762427639595,0,0,0,0.227662191351298,0,0.230467975111559,0,0.339848664884159,0.0657727735628491,0,0,0.078493092850514,0.471346769748006,0.280272163313789,1.82631744101899,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0.853425474875886,0,0,0,0,0.467878926924211,0,0,0.11294608203896,0,0.301925687133347,1.08043821351123,1.74847648403166,0.940634592723046,0.245148321753905,1.41405928260976,0.196308467114945,0.297046400327086,0,0,0.0939839179798536,0,0.0999411559249289,0,0,0,0.730336388246517,0,0.143339583151451,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0.358611026963382,0,0,0,0,0.359300808426348,0,0.122241444182866,0,0,0,0 | |||
|short_description=p22@RABGAP1L | |||
}} |
Revision as of 22:23, 10 January 2014
Short description: | p22@RABGAP1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_RABGAP1L_5end |
Coexpression cluster: | C3906_CD4_diffuse_acute_chronic_pancreas_gastrointestinal_temporal |
Association with transcript: | -103bp_to_uc001gkh.3_5end |
EntrezGene: | RABGAP1L |
HGNC: | 24663 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 7.03e-08 | 1 |
CD4-positive, alpha-beta thymocyte | 2.50e-07 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 2.50e-07 | 1 |
mature CD4 single-positive thymocyte | 2.50e-07 | 1 |
resting double-positive thymocyte | 2.50e-07 | 1 |
double-positive blast | 2.50e-07 | 1 |
CD69-positive double-positive thymocyte | 2.50e-07 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 2.50e-07 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 2.50e-07 | 1 |
CD24-positive, CD4 single-positive thymocyte | 2.50e-07 | 1 |
peptide hormone secreting cell | 2.83e-07 | 1 |
enteroendocrine cell | 2.83e-07 | 1 |
type D enteroendocrine cell | 2.83e-07 | 1 |
somatostatin secreting cell | 2.83e-07 | 1 |
pancreatic D cell | 2.83e-07 | 1 |
progenitor cell of endocrine pancreas | 2.83e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
small intestine | 3.80e-11 | 4 |
intestine | 3.73e-08 | 17 |
vas deferens | 2.35e-07 | 1 |
spermatic cord | 2.35e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 6.80e-13 | 8 |
myeloid leukemia | 4.39e-09 | 31 |
leukemia | 4.78e-09 | 39 |
hematologic cancer | 1.88e-08 | 51 |
immune system cancer | 1.88e-08 | 51 |
lymphatic system cancer | 7.03e-08 | 1 |
lymphosarcoma | 7.03e-08 | 1 |
chronic myeloid leukemia | 9.71e-08 | 1 |
somatostatinoma | 2.83e-07 | 1 |
acute leukemia | 3.84e-07 | 1 |