FFCP PHASE1:Hg19::chr10:65028587..65028600,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=221037 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12313 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=34bp_to_ENST00000469152_5end | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_13_at_JMJD1C_5end | |||
|id=chr10:65028587..65028600,- | |||
|ontology_enrichment_celltype=CL:0000738!2.99e-34!140;CL:0000037!3.69e-31!172;CL:0000566!3.69e-31!172;CL:0002031!1.30e-28!124;CL:0000988!6.42e-28!182;CL:0002032!3.10e-27!165;CL:0000837!3.10e-27!165;CL:0002087!3.51e-25!119;CL:0000766!4.83e-20!76;CL:0000839!7.67e-17!70;CL:0000557!7.91e-17!71;CL:0000763!9.36e-17!112;CL:0000049!9.36e-17!112;CL:0002057!7.09e-16!42;CL:0002009!5.91e-15!65;CL:0000860!1.60e-14!45;CL:0002194!1.04e-13!63;CL:0000576!1.04e-13!63;CL:0000040!1.04e-13!63;CL:0000559!1.04e-13!63;CL:0000838!1.72e-10!52;CL:0000542!5.06e-10!53;CL:0000051!5.06e-10!53;CL:0000134!7.81e-08!358;CL:0002320!3.29e-07!365;CL:0000219!3.72e-07!390;CL:0002393!4.16e-07!9;CL:0002397!4.16e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000094;6.84e-16;8!CL:0000791;9.26e-16;18!CL:0000789;9.26e-16;18!CL:0002419;9.26e-16;18!CL:0000624;2.27e-15;6!CL:0000081;3.15e-11;11!CL:0002393;7.57e-11;6!CL:0002397;7.57e-11;6!CL:0000084;1.27e-10;25!CL:0000542;5.92e-10;53!CL:0000766;6.98e-10;69!CL:0000623;1.22e-09;3!CL:0000784;6.08e-09;3!CL:0000775;6.25e-09;3!CL:0000767;1.23e-08;3!CL:0002087;1.31e-08;104!CL:0000898;1.02e-07;3!CL:0000738;1.61e-07;136!CL:0001014;9.34e-07;2!CL:0001016;9.34e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.04e-42,136;CL:0000037,4.30e-33,168;CL:0000988,1.09e-30,177;CL:0002032,1.04e-28,161;CL:0000837,1.04e-28,161;CL:0002031,6.60e-28,120;CL:0002087,5.76e-25,115;CL:0000766,1.28e-19,72;CL:0000094,2.97e-16,8;CL:0000791,6.84e-16,18;CL:0000789,6.84e-16,18;CL:0002420,6.84e-16,18;CL:0002419,6.84e-16,18;CL:0000790,6.84e-16,18;CL:0000624,1.18e-15,6;CL:0000838,3.48e-15,52;CL:0000542,8.51e-15,53;CL:0000051,8.51e-15,53;CL:0000763,3.92e-14,108;CL:0000049,3.92e-14,108;CL:0000557,2.75e-13,67;CL:0000081,1.75e-11,11;CL:0002009,4.96e-11,61;CL:0000839,9.40e-11,66;CL:0000084,1.03e-10,25;CL:0000827,1.03e-10,25;CL:0000134,2.38e-10,354;CL:0002393,6.33e-10,9;CL:0002397,6.33e-10,9;CL:0002320,6.98e-10,361;CL:0000623,1.21e-09,3;CL:0000825,1.21e-09,3;CL:0000860,1.29e-09,42;CL:0002057,1.29e-09,42;CL:0000775,4.45e-09,3;CL:0000784,5.66e-09,3;CL:0002194,7.05e-09,59;CL:0000576,7.05e-09,59;CL:0000040,7.05e-09,59;CL:0000559,7.05e-09,59;CL:0000767,7.57e-09,3;CL:0000219,8.73e-09,386;CL:0000473,5.47e-08,48;CL:0000234,5.47e-08,48;CL:0000898,5.68e-08,3;CL:0000034,3.71e-07,441;CL:0000048,8.27e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000790;9.26e-16;18!CL:0000051;5.92e-10;53!CL:0002057;2.64e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.62e-19!102;UBERON:0003061!9.62e-19!102;UBERON:0002193!1.24e-15!112;UBERON:0001474!9.93e-15!86;UBERON:0002371!4.34e-14!80;UBERON:0004765!1.37e-11!101;UBERON:0001434!1.37e-11!101;UBERON:0002405!1.63e-08!115;UBERON:0002384!4.31e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.52e-12,98;UBERON:0003061,2.52e-12,98;UBERON:0002371,4.71e-11,76;UBERON:0001474,4.99e-11,82;UBERON:0002193,1.50e-10,108;UBERON:0004765,1.54e-09,90;UBERON:0002384,3.00e-09,371;UBERON:0002405,6.30e-09,93;UBERON:0001434,4.96e-08,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0.0787107813136792,2.75354993794233,8.82807615623589,1.85779347979291,0,0,0,0.387336002901508,0.142169232487422,0.587200878669695,3.32397245119126,3.20871115952227,3.25516306073778,0.447830948479849,1.29557466407592,2.06060454107349,0.581592955118259,1.51150377475524,0.242584061187816,0,0,0.619412741790207,0.28769239232215,0.768482119587302,0.945928919554341,1.37898272294647,1.93645405075148,0,1.31769637679823,0.545812300115692,0.449446968890169,0.306083892370903,1.28371610830437,0.639337125799041,0.329851300186716,1.39624560335142,0,0.580418477257168,0.56738522469114,0.622822248995575,1.00499466102697,0.521482918420201,1.08594422352558,0,0.368277635987565,0.632924774881769,0.422510572623884,1.27562579979026,1.67726916406701,0.44931452458598,0.901061357049038,2.08943262706204,1.71007646244749,0.79566670879636,0.547992461293902,0,0,2.66852776159066,1.70692089026603,1.60158394814405,1.72425731986345,0.661044872784862,0.954053754535364,1.1384259382189,0.587237189370939,1.91136614062614,1.32171328579026,2.24203425192614,0.526768169550154,9.24535919535015,3.53709686474248,5.14003747498773,0.501559486172034,1.95553359980154,1.4203434172042,0,0.668462741311041,1.76763544484902,0.886135578334485,0.541607727530031,0.128091319725675,0.260118695119756,0,0.276350017785848,0.579606171470105,2.66915813691709,3.21048993707656,2.09071047609954,0.339928028092699,1.14966148080576,3.09264700934367,3.54227568827304,0.318565414324097,0,0,0.752875595388864,0.127986611154418,2.49861453104692,1.18388626022008,0,19.7574608360238,6.68600489458768,5.79297615531196,2.43806866313962,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.263504357079378,0.130979075497713,0,0,0,0,0,3.33886874027479,2.28797964312051,3.71457501329565,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,3.9534125230819,0,0,0,0,0.529636723252875,0.573673241497627,0.354668382198357,0,0,0,0.933633106199299,0,0,0.151357427644931,0,0,0,0,0,0,0,0.140450806702248,0.204154171254893,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0.226864366320042,0.179389635688862,0.427114777637135,0,0.300091096084402,0.309157587715317,0,0,0,0,1.26216887122057,0.0920498986422993,0,1.06502877754984,0.302256294682921,0,0,0.272746120590835,0,0.365921118388786,0.397589304964456,0.464775771478074,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0.325808305310325,0,0,0,0.117408694235822,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,2.46331618947972,0.44024217006613,1.03664057770386,0.576479813667846,1.13618190083742,0,0,0,0,0,0,0.285826432630578,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,16.7476146171638,9.05635814409973,7.7005821767849,0.508189248444927,0,0.773288812777695,0.502548796003046,0.637938751653163,2.99602809578873,2.99161459204025,7.45947924184864,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,5.37596867919507,3.23571301227925,0.74709290462411,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.522870902049801,0,0,0,0.309123034943167,0,0.495056999523528,0,0,0,0.096670718292122,0.154048617114644,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0.507447609232169,0.764637207142375,0,0.952927101831156,0,1.29694662238543,0.540031437238115,0.79312517629427,0,0,0,0,0.144269212976445,0.213425530045242,0,0,0.383010740264733,0.211673582723883,0.649243880549111,0.280797178113459,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0.614481528616916,0.671028323677248,0.667396566847634,0,0,0,0.270455678475983,0,2.81974010175699,0.18714054040822,0.146508179271894,0.121360521749513,0.111443384277478,0.284136146806413,0,0.296964680832639,0,0,0.140669416410513,0,0.16480387422676,0,0.19924798825107,0,0,1.02268682502155,0.123084805461069,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0.185536196323703,1.99613798001194,0,0.0874599999961957,0,0,0.254253650292766,0,0,0,0,0,0.482385754501632,0,0.221158519862449,0,0,0,0.139423744278603,0.461701551022782,0,0,0,0,0.31900115973192,0,0,0,0.470940769185074,0.498635045700469,0,0,0.167821586975843,0,0.158936578980379,0,0,0.141353071433941,0,0,0.353830258013357,0,0.296521128680622,0,0.104421949505455,0.067401132980677,0,0.234264445725339,0.182454789215666,0,0.728341138602278,0.394584402849391,1.20990716048664,1.22429104652196,1.0741718536843,0.150323419414493,0,0,0,0,0,0,0.277349346026277,0,0,0,0.698906672968121,0,0.19351266257817,0,0,0.193978032976839,4.05978182780901,0.225980740780532,0,0.596143835108969,0.12662159191175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| |||
|short_description=p13@JMJD1C | |||
}} |
Revision as of 03:06, 11 January 2014
Short description: | p13@JMJD1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_JMJD1C_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | 34bp_to_ENST00000469152_5end |
EntrezGene: | JMJD1C |
HGNC: | 12313 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.52e-12 | 98 |
blood island | 2.52e-12 | 98 |
bone marrow | 4.71e-11 | 76 |
bone element | 4.99e-11 | 82 |
hemolymphoid system | 1.50e-10 | 108 |
skeletal element | 1.54e-09 | 90 |
connective tissue | 3.00e-09 | 371 |
immune system | 6.30e-09 | 93 |
skeletal system | 4.96e-08 | 100 |