FFCP PHASE1:Hg19::chr11:119999153..119999163,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23650 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17274 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=454bp_to_ENST00000532195_5end | |||
|description=CAGE_peak_24_at_TRIM29_5end | |||
|id=chr11:119999153..119999163,- | |||
|ontology_enrichment_celltype=CL:0002623!4.33e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002623;1.31e-14;3!CL:0000622;2.63e-09;5!CL:0000154;5.73e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,1.22e-14,3;CL:0000622,2.53e-09,5;CL:0000154,5.54e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006241;4.89e-53;3!UBERON:0003057;4.89e-53;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003076!2.52e-28!15;UBERON:0003057!2.52e-28!15;UBERON:0004733!1.36e-17!12;UBERON:0002028!1.36e-17!12;UBERON:0007277!1.36e-17!12;UBERON:0001737!2.32e-16!9;UBERON:0004732!3.70e-16!13;UBERON:0001896!1.62e-14!3;UBERON:0005290!1.62e-14!3;UBERON:0010096!1.62e-14!3;UBERON:0002240!2.31e-14!3;UBERON:0002298!3.98e-14!8;UBERON:0001049!1.45e-11!57;UBERON:0005068!1.45e-11!57;UBERON:0006241!1.45e-11!57;UBERON:0007135!1.45e-11!57;UBERON:0007023!3.01e-11!115;UBERON:0000063!4.37e-10!97;UBERON:0001557!6.65e-10!19;UBERON:0001004!8.93e-10!72;UBERON:0000341!1.79e-09!2;UBERON:0000153!2.03e-09!129;UBERON:0007811!2.03e-09!129;UBERON:0000064!2.19e-09!219;UBERON:0003075!4.78e-09!86;UBERON:0007284!4.78e-09!86;UBERON:0005174!8.78e-09!5;UBERON:0001137!8.78e-09!5;UBERON:0004121!8.84e-09!169;UBERON:0002346!1.70e-08!90;UBERON:0000924!1.85e-08!173;UBERON:0006601!1.85e-08!173;UBERON:0001017!3.41e-08!82;UBERON:0002680!4.35e-08!9;UBERON:0001895!4.35e-08!9;UBERON:0010092!4.35e-08!9;UBERON:0000033!6.29e-08!123;UBERON:0005743!1.12e-07!86;UBERON:0001044!2.22e-07!6;UBERON:0003293!2.22e-07!6;UBERON:0003294!2.22e-07!6;UBERON:0010047!2.22e-07!6;UBERON:0000167!2.22e-07!6;UBERON:0008947!2.50e-07!38;UBERON:0003258!2.50e-07!38;UBERON:0000065!2.92e-07!53;UBERON:0000072!3.69e-07!46;UBERON:0000988!6.15e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;2.51e-53;3!UBERON:0005290;2.51e-53;3!UBERON:0002240;4.89e-53;3!UBERON:0005174;4.89e-53;3!UBERON:0001137;4.89e-53;3!UBERON:0002298;2.54e-27;6!UBERON:0004733;3.04e-14;12!UBERON:0002028;3.04e-14;12!UBERON:0004732;3.12e-13;13!UBERON:0001044;5.73e-08;6!UBERON:0003293;5.73e-08;6!UBERON:0003294;5.73e-08;6!UBERON:0010047;5.73e-08;6!UBERON:0003408;5.73e-08;6!UBERON:0000167;5.73e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,2.19e-53,3;UBERON:0005290,2.19e-53,3;UBERON:0010096,2.19e-53,3;UBERON:0002240,6.39e-53,3;UBERON:0005174,6.39e-53,3;UBERON:0001137,6.39e-53,3;UBERON:0003076,1.81e-42,15;UBERON:0003057,1.81e-42,15;UBERON:0002298,2.38e-27,6;UBERON:0004733,2.94e-14,12;UBERON:0002028,2.94e-14,12;UBERON:0007277,2.94e-14,12;UBERON:0004732,3.03e-13,13;UBERON:0001049,8.95e-12,56;UBERON:0005068,8.95e-12,56;UBERON:0006241,8.95e-12,56;UBERON:0007135,8.95e-12,56;UBERON:0001017,2.75e-08,81;UBERON:0003075,2.75e-08,82;UBERON:0007284,2.75e-08,82;UBERON:0001044,5.54e-08,6;UBERON:0003293,5.54e-08,6;UBERON:0003294,5.54e-08,6;UBERON:0010047,5.54e-08,6;UBERON:0000167,5.54e-08,6;UBERON:0002346,6.20e-08,86;UBERON:0001016,1.56e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0.482022059766964,0.110293972732394,0,0.237270619111097,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0.120596438625408,0,0.552896299656123,0.295547618953547,0,0,0.278847488557207,0.0769502585037971,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0.19566461893209,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,1.55300672151593,3.29110935589332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.815636795721981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6828739083758,3.45629830907046,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17785080268967,1.48523200163543,0.4226557275834,0,0,0,0,0.178553938605658,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0.23806443146374,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p24@TRIM29 | |||
}} |
Revision as of 10:48, 11 January 2014
Short description: | p24@TRIM29 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_TRIM29_5end |
Coexpression cluster: | NA |
Association with transcript: | 454bp_to_ENST00000532195_5end |
EntrezGene: | TRIM29 |
HGNC: | 17274 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 1.22e-14 | 3 |
acinar cell | 2.53e-09 | 5 |
protein secreting cell | 5.54e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 2.19e-53 | 3 |
myelencephalon | 2.19e-53 | 3 |
future myelencephalon | 2.19e-53 | 3 |
spinal cord | 6.39e-53 | 3 |
dorsal region element | 6.39e-53 | 3 |
dorsum | 6.39e-53 | 3 |
posterior neural tube | 1.81e-42 | 15 |
chordal neural plate | 1.81e-42 | 15 |
brainstem | 2.38e-27 | 6 |
segmental subdivision of hindbrain | 2.94e-14 | 12 |
hindbrain | 2.94e-14 | 12 |
presumptive hindbrain | 2.94e-14 | 12 |
segmental subdivision of nervous system | 3.03e-13 | 13 |
neural tube | 8.95e-12 | 56 |
neural rod | 8.95e-12 | 56 |
future spinal cord | 8.95e-12 | 56 |
neural keel | 8.95e-12 | 56 |
central nervous system | 2.75e-08 | 81 |
neural plate | 2.75e-08 | 82 |
presumptive neural plate | 2.75e-08 | 82 |
saliva-secreting gland | 5.54e-08 | 6 |
gland of oral region | 5.54e-08 | 6 |
gland of foregut | 5.54e-08 | 6 |
oral gland | 5.54e-08 | 6 |
oral cavity | 5.54e-08 | 6 |
neurectoderm | 6.20e-08 | 86 |
nervous system | 1.56e-07 | 89 |