FFCP PHASE1:Hg19::chr14:107170409..107170434,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=5558 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000390633_5end | |||
|coexpression_cluster_id=C359 | |||
|description=CAGE_peak_1_at_IGHV1-69_5end | |||
|id=chr14:107170409..107170434,- | |||
|ontology_enrichment_celltype=CL:0000738!9.64e-18!140;CL:0002087!1.55e-17!119;CL:0000236!4.93e-17!14;CL:0000945!1.48e-15!24;CL:0000826!1.48e-15!24;CL:0002031!1.74e-13!124;CL:0000037!1.63e-12!172;CL:0000566!1.63e-12!172;CL:0000542!8.83e-11!53;CL:0000051!8.83e-11!53;CL:0000988!9.31e-11!182;CL:0000838!2.74e-10!52;CL:0002032!3.79e-10!165;CL:0000837!3.79e-10!165;CL:0002057!1.32e-08!42;CL:0000860!1.40e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.37e-22;24!CL:0000236;5.16e-22;13!CL:0000542;8.63e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,9.90e-24,14;CL:0000945,1.20e-22,24;CL:0000826,1.20e-22,24;CL:0000838,2.38e-08,52;CL:0000738,2.58e-08,136;CL:0000542,4.32e-08,53;CL:0000051,4.32e-08,53;CL:0002087,1.35e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000051;8.63e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.14e-57!115;UBERON:0002390!2.52e-12!102;UBERON:0003061!2.52e-12!102;UBERON:0002193!1.30e-11!112;UBERON:0000178!1.50e-09!15;UBERON:0000179!1.50e-09!15;UBERON:0000463!1.50e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.36e-13;15!UBERON:0000179;1.36e-13;15!UBERON:0000463;1.36e-13;15!UBERON:0002390;3.10e-11;32!UBERON:0007023;4.90e-11;114!UBERON:0002193;9.56e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.85e-44,114;UBERON:0000178,1.36e-13,15;UBERON:0000179,1.36e-13,15;UBERON:0000463,1.36e-13,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.08055698328027,4.98978217526377,8.82451902901633,0,0,0,3.25362242437267,212.543002568695,7.04641054403633,0,0.200544447470142,0,34.2590675587084,44.0495385785812,2.06060454107349,0,2.26725566213286,0,0.232429036905685,1.6446715520873,0.309706370895104,0.863077176966451,0.512321413058201,0.236482229888585,1.03423704220986,2.5819387343353,0,0.564727018627814,0.818718450173537,0.224723484445085,0.612167784741805,3.20929027076094,0,0,0.997318288108159,0.426224750532694,0.870627715885752,5.6738522469114,0,0.251248665256743,1.0429658368404,0,15.7403870684676,2.94622108790052,0.316462387440884,0,0,0.209658645508376,0,0,0,0.285012743741249,0,0.730656615058536,373.112038258004,346.798018151454,370.035849607239,141.67443389208,152.150475073685,331.057405413782,375.473487741802,343.459351632731,648.902784784771,670.037633072241,716.762302734804,0,4.48406850385229,17.9101177647052,0,0,0.205601498999509,0,0.32592226663359,0,1.94826728407911,1.55974639639243,0,0.221533894583621,0,0,0,0,0,0,0.14828656316206,0,1.04535523804977,0,0.383220493601921,0,0,0,0,0,0.301150238155546,0.255973222308837,0,0,0,0.201606743224732,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0.175669571386252,341.200491671541,0,0,0,0,0.26591592103773,0.953962497221368,0,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,0,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,37.3474342337498,2.95394953340702,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,56.6544391576711,14.2371372540287,19.1042328468165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.8818933778395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,31.6323170609978,0,0,0,0,43.1330467847344,40.5257719785459,27.912712171534,32.8759850131749,28.3839968429474,45.3931317834902,33.4819491087631,32.5181322280651,0,0,0,0.929015875628594,1721.42024923494,0.213425530045242,0.318852545457645,0,0,0,0,0,1.82587743226554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24873719888493,0,0,0,0,0,0,0.994147647766298,0,0,0,0,109.785641526339,914.77604432363,0,0,1.6001024709939,0,0,0,0,1017.60537255061,67.0552658571431,0,0.969332746095218,0.556608588971108,0,0,0,142.09991678522,0,0,0,0,0,0,0,0,0,0,0.886642856860642,2.19385397153973,0,0,464.779561362934,0,0,0,0,0.31900115973192,0,1.06606955203727,17.3728606932752,0,0,0,0,0,0,0,0,0,0,0,490.664132021703,1076.79393269915,6.11030144933625,0,0,0,24.8036169368892,0,0.234264445725339,1.82454789215666,0,0,0,3.62972148145992,0,125.172614244035,0,0,0,0,0,0,0,0,0,0,0,15.2012201370566,0,0,0,0,746.718437944341,0,0,0,0,0.759729551470544,0,0,233.731029239591,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,1.67569440763353,0.229160424011684,0.717873024576814,2.99518500748487,16.3105898291897,8.9268582976749,0.940568614814168,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.364497339948148,0,189.212503225375,1.25891011523995,0,0,0,35.7347663186683,10.5934715258469,0,0,0,0,0,0,0,0,62.138147079507,6.62534444561107,0.129282956361551,0.13223260174269,0,0,274.550437711543,1.25763444079733,205.462571452209,1062.7876187212,0.197611631897944,8.28189668990092,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.332787154610557,2.2354705058898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.867479195013787,0,0,0,0.899209151350433,0,0.159633859057151,0.205116364240755,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,45.1261970095544,0,17.9748222583611,0,0,0,1.35075169236789,0,0.206686796501184,0.126831620387814,0,158.446494621726,147.87093116001,0,0,0,0,1.21393120847326,2.04895972216168,26.522008678629,558.769605657974,0,1.42736439251347,0.460409414939944,0,0,36.2638088969375,0.314231179832004,0,0,0,0,92.7050777971233,0,0,0,0,0,0,0,569.621023078048,0,0,96.1088603933409,0,0,0,0,0,0,0,1.33461648913121,0,0.485710993059139,0,0,0,0,0,0,472.151499304405,2.18559560503957,0,2.69663153929296,0,0.196308467114945,0,0,0,793.130283831984,96.6868319603658,0.0999411559249289,0,0,0,0,171.564751993298,0.286679166302903,0,0.0679914901909147,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,75.020911236057,23.0449151934314,0,0.103432995861895,604.944806653083,0.714193294391221,87.0012615491002,20.3605062890414,0,19.0941474834495,0.202117188958219,107.334356713202,0,2584.43297827575,1073.03591487983,0.332660356546013,0,0,0,0,4.69281884806909,31.7827754875453,0.406896178315738,19.9727032255654,773.092641183132,7930.86449958198 | |||
|short_description=p1@IGHV1-69 | |||
}} |
Revision as of 22:24, 11 January 2014
Short description: | p1@IGHV1-69 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGHV1-69_5end |
Coexpression cluster: | C359_xeroderma_tonsil_acute_colon_lymph_trachea_bladder |
Association with transcript: | 0bp_to_ENST00000390633_5end |
EntrezGene: | NA |
HGNC: | 5558 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 9.90e-24 | 14 |
lymphocyte of B lineage | 1.20e-22 | 24 |
pro-B cell | 1.20e-22 | 24 |
lymphoid lineage restricted progenitor cell | 2.38e-08 | 52 |
leukocyte | 2.58e-08 | 136 |
lymphocyte | 4.32e-08 | 53 |
common lymphoid progenitor | 4.32e-08 | 53 |
nongranular leukocyte | 1.35e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.85e-44 | 114 |
blood | 1.36e-13 | 15 |
haemolymphatic fluid | 1.36e-13 | 15 |
organism substance | 1.36e-13 | 15 |