FFCP PHASE1:Hg19::chr15:96877047..96877056,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7026 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7976 | |||
|TSSclassifier=weak | |||
|UniProt=B4DQJ2 | |||
|association_with_transcript=478bp_to_NM_001145157,uc010urk.1_5end | |||
|description=CAGE_peak_39_at_NR2F2_5end | |||
|id=chr15:96877047..96877056,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002570;7.18e-11;8!CL:0000511;2.50e-10;1!CL:0002625;2.50e-10;1!CL:0000216;2.50e-10;1!CL:0002537;2.04e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002570,9.73e-11,8;CL:0000511,1.43e-10,1;CL:0002625,1.43e-10,1;CL:0000216,1.43e-10,1;CL:0002537,2.04e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.79e-13;3!DOID:127;2.79e-13;3!DOID:3371;1.03e-10;1!DOID:4549;1.03e-10;1!DOID:5861;1.03e-10;1!DOID:6496;1.03e-10;1!DOID:6193;2.50e-10;1!DOID:0060072;3.45e-10;4!DOID:5093;6.24e-10;4!DOID:1612;6.24e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.70e-13,3;DOID:127,1.70e-13,3;DOID:3371,1.08e-10,1;DOID:4549,1.08e-10,1;DOID:5861,1.08e-10,1;DOID:6496,1.08e-10,1;DOID:6193,1.89e-10,1;DOID:0060072,2.39e-10,4;DOID:5093,6.54e-10,4;DOID:1612,6.54e-10,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000996;2.50e-10;1!UBERON:0001136;2.50e-10;1!UBERON:0001343;2.50e-10;1!UBERON:0004910;2.50e-10;1!UBERON:0004813;2.50e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004871,4.79e-11,8;UBERON:0001136,1.43e-10,1;UBERON:0001343,1.43e-10,1;UBERON:0004910,1.43e-10,1;UBERON:0005154,1.43e-10,1;UBERON:0005295,1.43e-10,1;UBERON:0004813,1.43e-10,1;UBERON:0005297,1.43e-10,1;UBERON:0005294,1.43e-10,1;UBERON:0010141,1.43e-10,1;UBERON:0005891,1.43e-10,1;UBERON:0000996,2.74e-10,1;UBERON:0004876,6.47e-08,11 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.845726424575827,3.00219895059391,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46379839637152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0.324547393654683,0,0,0,0,0,0.596287222100115,0.860234595106124,0.347140501607594,0.56530794192401,0.838998872419812,0,0.417989933073621,0,0.35576626268671,0,0.402829317109147,0.760272105718513,0.488124115096339,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0,0,0,0,0,0,0,0.134710672069688,0.490385709340376,0.151357427644931,0,0.234321431833797,0,0,0.298897361103602,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0.910161361938026,0,0,0,0.277064115484183,0,0,0,0.113432183160021,0,0.213557388818567,0,0,0,0,0.18611685633159,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0.190254152234598,1.58040879591855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.224262168690721,0,0,0,3.57656445851882,0,2.92531928243358,2.08014873822732,0.257207374262142,0,0,0,0.542621605391443,0,0,0.355391948742546,0,0,0,0.299918973546171,0,0,0,0.479249710983165,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.831883446123229,0.178428988797162,0.630809660135739,0.35142424497814,0.300946099727719,0,0,0,0.737476674166813,0,0,0.686286847621712,0,0,0,0,0,0,0.744323423456331,0,0.280660094433074,0,0.511707249066704,0.482561763430822,0,0.308419387605311,0.355123450626254,0.492762936082855,0,0.581051892299796,0,0,0,0.114814448164607,0,0.262248829918848,0,0,0,0,0,0,0.340187410553031,0,1.54227252690289,0,1.00337954770971,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,1.6068392984416,0.290012154876366,0.154048617114644,0,0,0,0.145016693914229,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0,0.532306030317022,0,0.18532421910392,0,0.372158369359667,0.316379424718726,0.38126038784765,0.255897791311334,0.855877976067841,0,0,0.359744915166629,0,0.117812402345686,0.606547444719948,0,0,0,0.487426979262569,0,0.272999822815972,0,0,0,0,0,2.89387767133344,0.655894752046633,0.405820753925408,0,0,0,0,0,0.354761064070598,0,0,0.379473173765715,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,1.04171104434093,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0,0.113942055847001,0.23056390438806,0,0,0,0.824378340616761,0,0,0,0,0,0,0,0.189753732724185,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728341138602278,0.394584402849391,0,0.61214552326098,0,0.150323419414493,0.311064574191741,0,0,0.313932918407225,0,0,0,0,0,0,0,1.54787429224455,0,0,0,0.0969890164884194,2.55942767405351,0,0.137041924646751,0,0,0,0,0.426905989478705,0,0,0.114536596165916,0,0,0.372757606696298,0,0.135904206073614,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,1.59045937961861,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0.209818352539992,0,0,0,0,0,1.5256112259285,3.80099721227599,0,1.95952416065645,0,0.738832686744051,0,0.113312091520126,0,0,0,0,0,0,0.213574825135389,0.471612915298998,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,1.10961172300523,0,0,0,0,0.151230923763239,0.15543720058278,0.147855149989634,0,0,0.155262956876259,0,0.53168342911599,1.04349012362347,0,0,0,0,0,0,0,0,1.03018711554838,0.336749488765919,0,0,0,0,0,0.231522474323834,0.244736704506468,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0.177404740325278,0,0,0.135939465953663,0.197318320688547,0,0.111231401892069,0.156986185701028,0,0,0,0,0,0.285906176706625,0,0.813689977576877,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0.356760272332706,0,0,0.301925687133347,0.231522474323834,0.437119121007915,0,0.980593287015622,0,0,0.297046400327086,0.8453114551668,0,0.187967835959707,0.128915775947154,0,0,0,0,0.730336388246517,0,0,0,0.135982980381829,0.436350690340377,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0.303114792872958,0,0,0.103432995861895,0,0.476128862927481,0,0,0,0.12729431655633,0.404234377916439,0,0,0.0673520530145875,0,0.332660356546013,0,0.106727345877715,0,0.269475606319761,0,0.366724332548599,0.406896178315738,1.33151354837103,0.20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| |||
|short_description=p39@NR2F2 | |||
}} |
Revision as of 01:27, 12 January 2014
Short description: | p39@NR2F2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_39_at_NR2F2_5end |
Coexpression cluster: | NA |
Association with transcript: | 478bp_to_NM_001145157, uc010urk.1_5end |
EntrezGene: | NR2F2 |
HGNC: | 7976 |
UniProt: | B4DQJ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of adipose | 9.73e-11 | 8 |
androgen binding protein secreting cell | 1.43e-10 | 1 |
seminiferous tubule epithelial cell | 1.43e-10 | 1 |
Sertoli cell | 1.43e-10 | 1 |
amnion mesenchymal stem cell | 2.04e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
somatic layer of lateral plate mesoderm | 4.79e-11 | 8 |
mesothelium | 1.43e-10 | 1 |
seminiferous tubule of testis | 1.43e-10 | 1 |
epithelium of male gonad | 1.43e-10 | 1 |
epithelial cord | 1.43e-10 | 1 |
sex cord | 1.43e-10 | 1 |
seminiferous tubule epithelium | 1.43e-10 | 1 |
testis sex cord | 1.43e-10 | 1 |
genital ridge | 1.43e-10 | 1 |
primitive sex cord of indifferent gonad | 1.43e-10 | 1 |
coelomic epithelium | 1.43e-10 | 1 |
vagina | 2.74e-10 | 1 |
urogenital ridge | 6.47e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.70e-13 | 3 |
leiomyoma | 1.70e-13 | 3 |
chondrosarcoma | 1.08e-10 | 1 |
extraosseous chondrosarcoma | 1.08e-10 | 1 |
myxoid chondrosarcoma | 1.08e-10 | 1 |
extraskeletal myxoid chondrosarcoma | 1.08e-10 | 1 |
epithelioid sarcoma | 1.89e-10 | 1 |
benign neoplasm | 2.39e-10 | 4 |
thoracic cancer | 6.54e-10 | 4 |
breast cancer | 6.54e-10 | 4 |