FFCP PHASE1:Hg19::chr16:55539338..55539366,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C351 | |||
|description=CAGE_peak_at_chr16:55539338..55539366,+ | |||
|id=chr16:55539338..55539366,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.13e-32!180;CL:0000680!2.07e-18!57;CL:0000056!2.07e-18!57;CL:0000355!2.07e-18!57;CL:0000192!7.54e-18!42;CL:0000514!7.54e-18!42;CL:0000187!6.02e-17!54;CL:0000183!7.56e-17!59;CL:0000393!5.76e-15!60;CL:0000211!5.76e-15!60;CL:0000057!1.06e-13!75;CL:0000359!1.67e-13!32;CL:0000222!6.47e-11!119;CL:0000048!3.60e-08!430;CL:0002334!3.92e-08!12;CL:0002539!8.68e-08!10;CL:0000723!1.18e-07!436;CL:0002371!1.44e-07!591;CL:0000499!3.00e-07!27;CL:0000034!3.71e-07!444;CL:0002620!7.47e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.10e-11;12!CL:0000499;8.70e-10;28!CL:0000192;1.00e-09;43!CL:0002539;5.58e-09;10!CL:0000136;9.69e-09;13!CL:0000359;1.01e-08;32!CL:0000134;1.87e-08;55!CL:0000153;8.97e-08;9!CL:0000447;8.97e-08;9!CL:0002320;3.03e-07;188!CL:0000048;3.93e-07;58!CL:0002595;8.11e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.18e-20,427;CL:0000723,1.20e-19,433;CL:0000034,1.08e-18,441;CL:0000057,5.69e-16,76;CL:0000192,2.32e-12,43;CL:0000514,2.32e-12,43;CL:0002334,9.83e-12,12;CL:0002320,1.16e-11,361;CL:0000134,2.28e-11,354;CL:0000680,6.33e-11,58;CL:0000056,6.33e-11,58;CL:0000355,6.33e-11,58;CL:0000136,7.53e-11,15;CL:0000187,5.95e-10,55;CL:0000499,9.06e-10,28;CL:0000219,3.77e-09,386;CL:0002539,5.62e-09,10;CL:0000359,7.03e-09,32;CL:0000393,2.72e-08,61;CL:0000211,2.72e-08,61;CL:0000153,1.00e-07,9;CL:0000447,1.00e-07,9;CL:0002595,3.73e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000514;1.00e-09;43 | |||
|ontology_enrichment_disease=DOID:2394!1.80e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;7.17e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.62e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002385!4.43e-18!63;UBERON:0001015!4.43e-18!63;UBERON:0000383!4.43e-18!63;UBERON:0001134!8.38e-18!61;UBERON:0002036!8.38e-18!61;UBERON:0003082!8.38e-18!61;UBERON:0004290!1.76e-16!70;UBERON:0004872!2.40e-16!84;UBERON:0001637!3.41e-16!42;UBERON:0003509!3.41e-16!42;UBERON:0004572!3.41e-16!42;UBERON:0000486!4.69e-16!82;UBERON:0000914!2.53e-15!83;UBERON:0002329!2.53e-15!83;UBERON:0003077!2.53e-15!83;UBERON:0003059!2.53e-15!83;UBERON:0007282!2.53e-15!83;UBERON:0009618!2.53e-15!83;UBERON:0007285!2.53e-15!83;UBERON:0001981!2.54e-14!60;UBERON:0007500!2.54e-14!60;UBERON:0004537!2.54e-14!60;UBERON:0006965!2.54e-14!60;UBERON:0004573!1.20e-13!33;UBERON:0004571!1.20e-13!33;UBERON:0005256!4.19e-12!143;UBERON:0000490!7.49e-12!138;UBERON:0002049!2.39e-11!79;UBERON:0007798!2.39e-11!79;UBERON:0000055!8.66e-11!69;UBERON:0003914!1.41e-10!118;UBERON:0002100!1.13e-09!216;UBERON:0001009!3.84e-09!113;UBERON:0004535!4.51e-09!110;UBERON:0000947!7.44e-09!21;UBERON:0010191!7.44e-09!21;UBERON:0001135!1.20e-08!15;UBERON:0002199!8.39e-08!45;UBERON:0002416!8.39e-08!45;UBERON:0004237!8.68e-08!10;UBERON:0004695!8.68e-08!10;UBERON:0002111!8.68e-08!10;UBERON:0004178!8.68e-08!10;UBERON:0000475!3.29e-07!365;UBERON:0004457!8.96e-07!12;UBERON:0000042!8.96e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.90e-12;33!UBERON:0004571;3.90e-12;33!UBERON:0004457;2.77e-11;9!UBERON:0000042;2.77e-11;9!UBERON:0003688;6.11e-10;6!UBERON:0002358;6.11e-10;6!UBERON:0003684;6.11e-10;6!UBERON:0001178;6.11e-10;6!UBERON:0000947;5.56e-09;21!UBERON:0010191;5.56e-09;21!UBERON:0004237;5.58e-09;10!UBERON:0004695;5.58e-09;10!UBERON:0002111;5.58e-09;10!UBERON:0004178;5.58e-09;10!UBERON:0001013;1.74e-08;14!UBERON:0002384;3.89e-08;198!UBERON:0002072;4.88e-08;5!UBERON:0001637;5.54e-08;42!UBERON:0003509;5.54e-08;42!UBERON:0004572;5.54e-08;42!UBERON:0003834;8.11e-07;5!UBERON:0001533;8.11e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,5.63e-14,33;UBERON:0004571,5.63e-14,33;UBERON:0002384,1.33e-11,371;UBERON:0001134,1.11e-10,62;UBERON:0002036,1.11e-10,62;UBERON:0003082,1.11e-10,62;UBERON:0001637,1.21e-10,42;UBERON:0003509,1.21e-10,42;UBERON:0004572,1.21e-10,42;UBERON:0007524,1.88e-10,73;UBERON:0002385,4.25e-10,64;UBERON:0001015,4.25e-10,64;UBERON:0000383,4.25e-10,64;UBERON:0002329,5.52e-10,71;UBERON:0003059,5.52e-10,71;UBERON:0007282,5.52e-10,71;UBERON:0004290,5.52e-10,71;UBERON:0009618,5.52e-10,71;UBERON:0003688,7.81e-10,6;UBERON:0002358,7.81e-10,6;UBERON:0003684,7.81e-10,6;UBERON:0001178,7.81e-10,6;UBERON:0003077,9.90e-10,72;UBERON:0007285,9.90e-10,72;UBERON:0002199,2.50e-09,46;UBERON:0002416,2.50e-09,46;UBERON:0000486,4.24e-09,83;UBERON:0000947,4.35e-09,21;UBERON:0010191,4.35e-09,21;UBERON:0007503,4.37e-09,78;UBERON:0004237,5.62e-09,10;UBERON:0004695,5.62e-09,10;UBERON:0002111,5.62e-09,10;UBERON:0004178,5.62e-09,10;UBERON:0004872,7.16e-09,83;UBERON:0001013,1.71e-08,14;UBERON:0005256,1.76e-08,122;UBERON:0000926,4.07e-08,315;UBERON:0004120,4.07e-08,315;UBERON:0006603,4.07e-08,315;UBERON:0002072,4.31e-08,5;UBERON:0007500,6.04e-08,59;UBERON:0001981,6.04e-08,59;UBERON:0004537,6.04e-08,59;UBERON:0006965,6.04e-08,59;UBERON:0004457,6.66e-08,12;UBERON:0000042,6.66e-08,12;UBERON:0003102,3.20e-07,99;UBERON:0003834,3.73e-07,5;UBERON:0001533,3.73e-07,5;UBERON:0002100,4.66e-07,199;UBERON:0003104,8.70e-07,160;UBERON:0009142,8.70e-07,160 | |||
|phase1_expression=3.45188920614058,8.34992043174834,2.25527046553554,6.00439790118782,8.49226079411847,2.61701557230111,5.06599756336621,2.52687949370732,5.74608382039645,0,0,0,0.263766978228454,0.37129905888014,0.662794751455832,3.36162573225888,3.61616716814386,5.11217063271161,2.92759679274304,0.984968464614303,0.816002764977012,0.626909442956176,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,2.53007406669196,2.00535164254356,2.31754430337318,3.1811437882044,2.91980922181582,0.189069634328136,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0.694281003215189,0,0.419499436209906,0.825354125820202,0.417989933073621,0,0,0,0.805658634218294,0,0.488124115096339,0,1.62028389576352,0,0.22452937262617,0.112611480483322,0,0,0.732806975721629,0,0,0,1.49091585508596,1.8994576749687,1.19168262731897,8.03142538096678,2.83734705758686,1.12135520028461,1.06748995729705,3.45334567784024,0,0.134710672069688,0.326923806226917,0.756787138224657,0,0,0.936480230490962,0,1.04614076386261,0,0,0.140450806702248,0.204154171254893,0,0.516628905878827,5.94001428641027,5.68713937340681,0,0,0,0,0,0,1.5324389789951,2.40380894250555,0.340296549480063,0.538168907066586,2.13557388818567,1.05965950579781,2.10063767259082,1.23663035086127,0.772921620136887,0.558350568994769,2.70042131586026,2.14361411354637,1.51460264546469,1.47279837827679,2.26304479546337,3.90510551768276,1.0075209822764,0.508681776931463,0.193260853163297,0,0,0,0,0.232387885739037,0.10366105501537,0,0.36497735907583,0,4.5026865673502,0,1.85747171212792,2.88751792667834,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.8231480226628,1.47008711385542,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,1.17217447210047,0,0.102827492703324,0,0.857479297891735,0,0,0.07333828582095,2.58543431515556,3.57656445851882,0,3.72313363218819,5.2003718455683,0,0,0.799266537048298,0.714889968290738,1.62786481617433,1.64648067356154,0,0.355391948742546,1.58390374586686,0.602878754119172,0,0.299918973546171,0,0,0,0.239624855491583,0,1.42636905040718,0.868687840005475,2.4657158706046,1.43248770591916,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0.500170521059677,0,1.45579603071565,4.81758269752337,0.788512075169673,0.585707074963566,1.20378439891088,9.09630016223939,3.10419213877515,2.65690239414175,0.368738337083406,1.47702144595741,1.37060810223918,2.05886054286514,0,0,0,0,0,0.30239029332968,6.4508030032882,1.99500565274481,6.45518217196069,3.20347873139252,4.60536524160033,6.59501076688791,0,2.92998418225046,3.01854933032316,0.739144404124282,6.75030757938707,1.85936605535935,0,1.00253235151642,0,1.37777337797528,3.27764102412091,6.68734516293063,0,0,0,0,0.105551628892876,0,0,0.431831832204279,1.54227252690289,0.270946437543853,0,0,0,0,0,0,0,0,0,0.824328093181778,0.0915694648183434,0.082509499920588,1.14853107599234,0.650060246036521,3.21367859688319,1.7400729292582,0,0,0.137836572484531,0.322260734604821,0.725083469571143,0.170453254832202,0.979352392114111,0.330569830721956,0,0,0,6.04299214086472,8.18512101759664,0.6970372701606,0.616067160352178,1.06461206063404,2.60979897622522,4.07713282028624,0.143124886741991,0.372158369359667,0.316379424718726,0.190630193923825,0.767693373934002,1.71175595213568,0.95460974377781,0,0.359744915166629,1.92175920815238,0.471249609382746,2.02182481573316,1.58510321173008,0.842516912477962,0.48763373908959,2.92456187557541,3.16950440270266,1.50149902548784,4.66637925447252,1.13008116620243,1.65409603063837,2.65375590096488,1.75380354101505,2.89387767133344,1.31178950409327,0.811641507850816,0.30982349809975,0.845086807596724,0.430234056612155,0,0.7133421029625,1.06428319221179,6.75544432952525,8.56166721695745,0,0.349934720244983,0,0,0,0.564862804660675,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0.398495976502139,0.276283915531148,0,0.511343412510774,0,2.48831670129446,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,1.93701494939902,0,0.807818799687949,0,0.31900115973192,1.4655614944298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,1.22206028986725,0,0,0,0,0,0,0,0.19566461893209,0,0.394584402849391,0,0.30607276163049,0.31593289814244,0,0,0,0,0,0,0,0.277349346026277,0,0,0,1.04836000945218,0,0,0,0,0.775912131907355,0,0.677942222341597,0.137041924646751,0,0,0,0.400794101257669,0.426905989478705,0,0,0,0,0,0,0,0,0,0.917983958726896,1.44475294950759,0,0,0,0.429765441419957,0,1.39641200636127,0,0,0,0.429226048136571,0.223171457441873,0.201550417460179,1.44119953416961,0,0,0,0,0,0,0,0,0.321506296930038,0,0.415440338029185,0,0,0,0,0.0788057072991982,0.209818352539992,0,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| |||
|short_description=p@chr16:55539338..55539366,+ | |||
}} |
Revision as of 03:39, 12 January 2014
Short description: | p@chr16:55539338..55539366, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:55539338..55539366, + |
Coexpression cluster: | C351_Fibroblast_Smooth_mesenchymal_Adipocyte_tenocyte_Synoviocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.18e-20 | 427 |
somatic stem cell | 1.20e-19 | 433 |
stem cell | 1.08e-18 | 441 |
fibroblast | 5.69e-16 | 76 |
smooth muscle cell | 2.32e-12 | 43 |
smooth muscle myoblast | 2.32e-12 | 43 |
preadipocyte | 9.83e-12 | 12 |
connective tissue cell | 1.16e-11 | 361 |
mesenchymal cell | 2.28e-11 | 354 |
muscle precursor cell | 6.33e-11 | 58 |
myoblast | 6.33e-11 | 58 |
multi-potent skeletal muscle stem cell | 6.33e-11 | 58 |
fat cell | 7.53e-11 | 15 |
muscle cell | 5.95e-10 | 55 |
stromal cell | 9.06e-10 | 28 |
motile cell | 3.77e-09 | 386 |
aortic smooth muscle cell | 5.62e-09 | 10 |
vascular associated smooth muscle cell | 7.03e-09 | 32 |
electrically responsive cell | 2.72e-08 | 61 |
electrically active cell | 2.72e-08 | 61 |
GAG secreting cell | 1.00e-07 | 9 |
carbohydrate secreting cell | 1.00e-07 | 9 |
smooth muscle cell of the subclavian artery | 3.73e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.62e-07 | 14 |