FFCP PHASE1:Hg19::chr17:685638..685645,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55178 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18485 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=20bp_to_AB590841,CU679954,CU690740,HQ448718_5end | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_2_at_RNMTL1_5end | |||
|id=chr17:685638..685645,+ | |||
|ontology_enrichment_celltype=CL:0000542!4.82e-08!53;CL:0000051!4.82e-08!53;CL:0000988!1.13e-07!182;CL:0000838!1.68e-07!52;CL:0000540!2.73e-07!6;CL:0000031!2.73e-07!6;CL:0000404!2.73e-07!6;CL:0000624!3.19e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002032;4.22e-21;1!CL:0000557;4.22e-21;1!CL:0000771;3.02e-11;2!CL:0000784;6.34e-08;3!CL:0000307;6.34e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,2.47e-11,2;CL:0000784,7.26e-08,3;CL:0000068,7.76e-08,3;CL:0000069,7.76e-08,3;CL:0000307,7.76e-08,3;CL:0000377,7.76e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000377;6.34e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.152826811495903,0.164201178899891,0,0,0,0.928896739896456,0.919421224478927,0,0.369754010166788,0.232401601740905,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0.209658645508376,0.112328631146495,0.150176892841506,0.16072558669708,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0.764546456250458,1.32171328579026,0,0,0.786839080455332,0.393010762749165,0.616804496998528,0,0.32592226663359,0.473447805734733,0,0.111410456885174,0.589211814949674,0.221533894583621,0.541607727530031,0,0.130059347559878,0,0,0,0.14828656316206,0,0,0,0.383220493601921,1.03088233644789,0.253019692019503,0,0,0,0,0,0,0.236777252044017,0,1.20964045934839,0.534880391567015,0.868946423296794,0,0,0.12786256184353,0,0,0,0,0,0,0,0.175669571386252,0.130979075497713,0,0.370784442784429,0,0,0,0,1.14398982156026,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0.805658634218294,0,0,0,0,0.0892997282840798,0,0,0,0.949265659568129,0,1.31780417436063,0,0,0,0.12663051166458,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0.365921118388786,0.397589304964456,0.232387885739037,0,0.504641701751257,0.36497735907583,0,0,0,0.464367928031979,0,0,0.168584690078102,0,0,0,0.237270619111097,0.674156540800822,0.196221465125346,0,0,0,0,0,0,0,0,0.882926198829301,0,0.171567810298526,0,0,0,0,0.651616610620649,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.07333828582095,0.129271715757778,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0.394061520403854,0.646882724578552,0.641715181398742,0,0,0.773288812777695,0.670065061337395,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0,0.343143423810856,0.206768026122887,0.215714200818617,0.320182673410333,0.909382714338778,0,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0,0,0.116210378459959,0.120859449591622,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0.254876273045038,0,0,0.219259876645935,0,0,0.328014645699706,0,0,0.0915694648183434,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0,0.75894634753143,0,0,0,1.08890984861323,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0.245040215981032,0.371606350251437,0,0.142283686696828,0.478278818186467,0,0,0,0,0,0,0.156679895773023,0,0,0.1605880751037,0.403599414382095,0.425846237690326,0,0,0,0,0.19538809540204,0.278406173895242,0,0,0.33307196799782,1.4098700508785,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0.16480387422676,0,0,0,0.251932747854276,0,0.123084805461069,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0.156980256395025,0,0,0.19606253431774,0.167821586975843,0,0,0,0.326465616318295,0,0,0,0,0,0.889563386041866,0.123563938946503,0.104421949505455,0,0,0,0.182454789215666,0,0.242780379534093,0,0,0,0,8.26778806779709,0.311064574191741,0,0,0,0,0,0,0,0.195984794828755,0,0.17472666824203,0,0.290268993867255,0,0.0821154570532092,0.0969890164884194,0,0,0,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,0.171594997861965,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,1.27746588066972,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0.254019996197353,0,0,0.160753148465019,0.550157746388935,1.24632101408756,0.899895566206002,0,0,0,0,0,0.105600336519406,0.179287339332845,0,0,0,0.25426853765475,0,0,0,0,0.246277562248017,0,0.226624183040251,0.146552233678082,0,0,0,0,0.704815022316672,0,0.157204305099666,0,0,0,0.121792598380896,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.276697269872462,0,0.151649117541648,0,0,0,0.434763085832475,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0.464033759878494,0.398095888698616,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0.255788742607303,0.107824811396682,0,0.109209638192014,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.115233987555779,0,0,0,0.236387681767936,0,0,0,0,0,0.215927591218621,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0,0.121917924982269,0,0,0,0,0,0.198950775161368,0,0.22589216407792,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0.0999411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| |||
|short_description=p2@RNMTL1 | |||
}} |
Revision as of 12:55, 20 January 2014
Short description: | p2@RNMTL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RNMTL1_5end |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | 20bp_to_AB590841, CU679954, CU690740, HQ448718_5end |
EntrezGene: | RNMTL1 |
HGNC: | 18485 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 2.47e-11 | 2 |
plasmacytoid dendritic cell | 7.26e-08 | 3 |
duct epithelial cell | 7.76e-08 | 3 |
branched duct epithelial cell | 7.76e-08 | 3 |
tracheal epithelial cell | 7.76e-08 | 3 |
tracheoblast | 7.76e-08 | 3 |