FFCP PHASE1:Hg19::chr17:7751302..7751327,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=23135 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29012 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=438bp_to_uc002gix.2_5end | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_5_at_KDM6B_5end | |||
|id=chr17:7751302..7751327,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.84e-22!42;CL:0000860!3.06e-22!45;CL:0000766!5.46e-19!76;CL:0000557!1.26e-16!71;CL:0000738!3.12e-16!140;CL:0000839!3.12e-15!70;CL:0002009!2.07e-14!65;CL:0002194!1.58e-13!63;CL:0000576!1.58e-13!63;CL:0000040!1.58e-13!63;CL:0000559!1.58e-13!63;CL:0002031!1.66e-13!124;CL:0000988!1.81e-12!182;CL:0002087!3.38e-12!119;CL:0000763!9.01e-11!112;CL:0000049!9.01e-11!112;CL:0000037!1.61e-10!172;CL:0000566!1.61e-10!172;CL:0002032!2.66e-10!165;CL:0000837!2.66e-10!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.62e-69;33!CL:0002057;6.62e-69;33!CL:0000473;3.52e-51;39!CL:0000234;3.52e-51;39!CL:0000576;1.52e-32;48!CL:0000766;2.82e-30;69!CL:0000763;4.31e-15;100!CL:0000775;2.91e-14;3!CL:0000097;2.09e-13;5!CL:0000081;1.45e-09;11!CL:0000738;2.34e-09;136!CL:0000094;6.14e-09;8!CL:0002087;6.15e-09;104!CL:0000163;1.77e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.52e-63,72;CL:0000860,3.79e-62,42;CL:0002057,3.79e-62,42;CL:0000473,7.52e-58,48;CL:0000234,7.52e-58,48;CL:0000839,2.54e-53,66;CL:0000557,1.99e-52,67;CL:0002194,6.06e-45,59;CL:0000576,6.06e-45,59;CL:0000040,6.06e-45,59;CL:0000559,6.06e-45,59;CL:0002009,2.80e-43,61;CL:0000763,9.96e-40,108;CL:0000049,9.96e-40,108;CL:0000738,6.62e-32,136;CL:0002031,3.94e-28,120;CL:0002032,1.05e-25,161;CL:0000837,1.05e-25,161;CL:0000037,2.68e-24,168;CL:0000988,3.52e-24,177;CL:0002087,9.32e-22,115;CL:0000775,3.12e-14,3;CL:0000097,1.54e-13,5;CL:0002028,1.54e-13,5;CL:0000081,1.58e-09,11;CL:0000134,1.76e-09,354;CL:0002320,3.93e-09,361;CL:0000094,6.03e-09,8;CL:0000219,6.61e-08,386;CL:0000163,1.50e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;6.26e-45;42!CL:0000049;7.87e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.20e-18!102;UBERON:0003061!8.20e-18!102;UBERON:0002193!3.88e-15!112;UBERON:0002371!1.14e-12!80;UBERON:0001474!3.09e-12!86;UBERON:0002405!4.67e-10!115;UBERON:0004765!1.01e-09!101;UBERON:0001434!1.01e-09!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.98e-45,76;UBERON:0001474,1.32e-41,82;UBERON:0004765,2.71e-37,90;UBERON:0002390,4.16e-36,98;UBERON:0003061,4.16e-36,98;UBERON:0002405,7.26e-36,93;UBERON:0001434,7.28e-33,100;UBERON:0002193,4.27e-32,108;UBERON:0002204,8.11e-17,167;UBERON:0003081,5.41e-16,203;UBERON:0002384,1.17e-08,371;UBERON:0000926,2.64e-08,315;UBERON:0004120,2.64e-08,315;UBERON:0006603,2.64e-08,315 | |||
|phase1_expression=0,0,0,0,0.893922188854576,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0.286235987131057,0.273748850145768,0,0.152826811495903,0.0821005894499457,0.157421562627358,0.786728553697808,0,0.309632246632152,0,0,0,0.0774672005803016,0,0,0,1.60435557976113,0.434021741431704,0.671746422719773,0,0,2.03557534291391,0.755751887377619,0.970336244751265,3.48643555358527,2.05583944010913,4.64559556342655,4.89077066947656,2.56160706529101,0.47296445977717,4.13694816883942,3.22742341791913,1.35426486594342,4.51781614902251,4.36649840092553,1.12361742222542,12.2433556948361,6.41858054152187,17.2621023965741,0.659702600373432,1.99463657621632,1.70489900213078,6.38460324982885,6.80862269629368,6.85104473895132,4.52247597462138,1.0429658368404,1.3031330682307,6.05399502633369,2.94622108790052,0.632924774881769,0,0,0,0.336985893439485,0.450530678524519,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,1.1384259382189,0.587237189370939,0.382273228125229,1.32171328579026,0,0,0.393419540227666,0.786021525498329,0.411202997999018,0,0.32592226663359,0.473447805734733,0,0,0.294605907474837,0,0,0.384273959177026,0.130059347559878,0,0,0.289803085735052,0.14828656316206,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0.604820229674197,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0.795285947051099,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0.573673241497627,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0.298897361103602,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0.184099797284599,0,0,0,0,0,0,0.286804595389004,0,0,0.348581828608555,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.245976877086227,0,0.219500570817251,0,0,0.0925884451585296,0.325808305310325,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.283550194484773,0,0,0,65.5242106401605,0.088048434013226,1.4512968087854,1.15295962733569,1.64115163454294,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0.871533458600294,0.299918973546171,1.2162378064119,0,0,0.239624855491583,1.14861935834114,0,0,0,0,0.112085143993527,0,0.862510299438069,0.513372145118994,0,0,0,0.167516265334349,0,8.23907726341901,32.9077605124427,6.21623270154053,0.12269149171914,0.500170521059677,0,0,0,0,0.234282829985426,0,2.27407504055985,0,0.664225598535437,0,0.0868836144680828,0.195801157462741,0,0.413536052245775,0.647142602455851,0.853820462427555,0,0,0,0,0,0,0.512556597022804,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0.604297247958111,0.200506470303285,0.276242966807689,0.114814448164607,0,0.262248829918848,0,0,0,0,0.316654886678627,0,0.340187410553031,0,4.62681758070868,0,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0.206082023295445,0.0915694648183434,0.082509499920588,0.574265537996172,1.30012049207304,0,0.193341436584244,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0.384380134730212,0.382838137483752,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0,0,0,0.0982490410131212,0.35667105148125,0,0,0,0,0,0,0,1.08890984861323,0.282431402330337,0,0,0,0.459446800413919,0,0,0.569647187174163,0.238231775457789,0.411362273086194,1.29694662238543,0,0.79312517629427,0,0,0,0,0,0.142283686696828,0,0.199579371432817,0,0,0,0,0,0,0,0,0.321176150207399,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0.307160702099232,0,0.281338832821026,0.111308705022906,0,0,0,0.276283915531148,0.251932747854276,0.102268682502155,0.246169610922139,0,0,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,0.260427761085233,0,0.724999575434793,0,0,0,0,0.583209226766509,0,0,0.120596438625408,0,1.21637185924347,0,0,0,0,0,0.113942055847001,0,0.807818799687949,0,0.31900115973192,0.274792780205587,1.5991043280559,0,0,0,0.225595660617181,0,0.167821586975843,0,0.158936578980379,0,0.163232808159148,0.141353071433941,0,0,0.176915129006678,0,0.593042257361244,0.247127877893006,0.208843899010911,0.134802265961354,0,0,0.182454789215666,0,0.242780379534093,0,0,0,0,1.80388103297391,0.103688191397247,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0.174118413160805,0.873633341210151,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0.193978032976839,0.441280633457501,0,0,0,0.0633107959558787,0,0,0.213452994739353,0.39961921916426,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0.717873024576814,0.199679000498991,0,0,0.134366944973453,0,0,0,0,0.202210631562555,0.295282444544246,0.0846733320657845,0,0.136203406111576,0,0,0,0.2249738915515,0.77380195455795,0,0,0,0.367182116944987,0,0,0,0.714695326373367,0,0.25426853765475,0.542999601753713,0,0,0,0,0.170388021785422,0,0.146552233678082,0,0,0.132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| |||
|short_description=p5@KDM6B | |||
}} |
Revision as of 13:42, 20 January 2014
Short description: | p5@KDM6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_5_at_KDM6B_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 438bp_to_uc002gix.2_5end |
EntrezGene: | KDM6B |
HGNC: | 29012 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.52e-63 | 72 |
classical monocyte | 3.79e-62 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.79e-62 | 42 |
defensive cell | 7.52e-58 | 48 |
phagocyte | 7.52e-58 | 48 |
myeloid lineage restricted progenitor cell | 2.54e-53 | 66 |
granulocyte monocyte progenitor cell | 1.99e-52 | 67 |
monopoietic cell | 6.06e-45 | 59 |
monocyte | 6.06e-45 | 59 |
monoblast | 6.06e-45 | 59 |
promonocyte | 6.06e-45 | 59 |
macrophage dendritic cell progenitor | 2.80e-43 | 61 |
myeloid cell | 9.96e-40 | 108 |
common myeloid progenitor | 9.96e-40 | 108 |
leukocyte | 6.62e-32 | 136 |
hematopoietic lineage restricted progenitor cell | 3.94e-28 | 120 |
hematopoietic oligopotent progenitor cell | 1.05e-25 | 161 |
hematopoietic multipotent progenitor cell | 1.05e-25 | 161 |
hematopoietic stem cell | 2.68e-24 | 168 |
hematopoietic cell | 3.52e-24 | 177 |
nongranular leukocyte | 9.32e-22 | 115 |
neutrophil | 3.12e-14 | 3 |
mast cell | 1.54e-13 | 5 |
basophil mast progenitor cell | 1.54e-13 | 5 |
blood cell | 1.58e-09 | 11 |
mesenchymal cell | 1.76e-09 | 354 |
connective tissue cell | 3.93e-09 | 361 |
granulocyte | 6.03e-09 | 8 |
motile cell | 6.61e-08 | 386 |
endocrine cell | 1.50e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.98e-45 | 76 |
bone element | 1.32e-41 | 82 |
skeletal element | 2.71e-37 | 90 |
hematopoietic system | 4.16e-36 | 98 |
blood island | 4.16e-36 | 98 |
immune system | 7.26e-36 | 93 |
skeletal system | 7.28e-33 | 100 |
hemolymphoid system | 4.27e-32 | 108 |
musculoskeletal system | 8.11e-17 | 167 |
lateral plate mesoderm | 5.41e-16 | 203 |
connective tissue | 1.17e-08 | 371 |
mesoderm | 2.64e-08 | 315 |
mesoderm-derived structure | 2.64e-08 | 315 |
presumptive mesoderm | 2.64e-08 | 315 |