FFCP PHASE1:Hg19::chr17:39778698..39778748,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:39778698..39778748,- | |||
|id=chr17:39778698..39778748,- | |||
|ontology_enrichment_celltype=CL:0002076!2.67e-20!43;CL:0000066!4.12e-20!254;CL:0000223!1.21e-13!59;CL:0002368!2.64e-13!13;CL:0000622!1.09e-11!5;CL:0000154!9.52e-10!6;CL:0002251!2.10e-09!21;CL:0002327!1.94e-08!4;CL:0000317!2.68e-08!2;CL:1000448!2.68e-08!2;CL:0002308!2.68e-08!2;CL:0002140!2.68e-08!2;CL:1000415!1.31e-07!2;CL:0000362!2.63e-07!8;CL:0002537!3.61e-07!5;CL:0000063!5.53e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0002231;3.81e-25;3!CL:0002252;2.71e-19;1!CL:0002076;5.02e-15;42!CL:0002368;3.34e-13;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,6.22e-25,3;CL:0002252,2.25e-19,1;CL:0002076,2.19e-15,42;CL:0002368,3.07e-13,13;CL:0000223,4.14e-11,58 | |||
|ontology_enrichment_development_v019=CL:0000223;8.73e-09;58 | |||
|ontology_enrichment_disease=DOID:1749!4.86e-14!14;DOID:305!6.39e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3151;2.71e-19;1!DOID:3149;2.71e-19;1!DOID:3451;2.48e-10;2!DOID:4159;2.48e-10;2!DOID:0060122;2.48e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,4.69e-19,1;DOID:3149,4.69e-19,1;DOID:3451,3.27e-10,2;DOID:4159,3.27e-10,2;DOID:0060122,3.27e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.95e-16!72;UBERON:0000065!2.09e-13!53;UBERON:0001737!3.26e-13!9;UBERON:0004119!2.24e-12!169;UBERON:0000925!2.24e-12!169;UBERON:0006595!2.24e-12!169;UBERON:0001557!2.61e-10!19;UBERON:0000072!5.72e-10!46;UBERON:0008947!6.16e-09!38;UBERON:0003258!6.16e-09!38;UBERON:0001911!1.94e-08!4;UBERON:0005333!1.94e-08!4;UBERON:0008425!1.94e-08!4;UBERON:0005311!1.94e-08!4;UBERON:0000305!2.04e-08!7;UBERON:0002419!2.68e-08!2;UBERON:0007771!2.68e-08!2;UBERON:0003297!2.68e-08!2;UBERON:0001821!2.68e-08!2;UBERON:0003487!2.68e-08!2;UBERON:0001820!2.68e-08!2;UBERON:0005089!2.68e-08!2;UBERON:0005088!2.68e-08!2;UBERON:0000161!4.11e-08!35;UBERON:0001007!7.35e-08!155;UBERON:0001555!7.35e-08!155;UBERON:0007026!7.35e-08!155;UBERON:0000077!1.12e-07!130;UBERON:0004871!2.30e-07!8;UBERON:0000166!3.42e-07!21;UBERON:0000365!6.72e-07!5;UBERON:0003102!9.25e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0002367;1.46e-07;11!UBERON:0010147;1.46e-07;11!UBERON:0001043;2.63e-07;3!UBERON:0003937;5.31e-07;12!UBERON:0005399;5.31e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002367,1.67e-07,11;UBERON:0010147,1.67e-07,11;UBERON:0009846,1.67e-07,11;UBERON:0003353,1.67e-07,11;UBERON:0004902,1.67e-07,11;UBERON:0003820,1.67e-07,11;UBERON:0009847,1.67e-07,11;UBERON:0001043,2.47e-07,3;UBERON:0009143,2.47e-07,3;UBERON:0003937,5.98e-07,12;UBERON:0005399,5.98e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0.90361775633475,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47296445977717,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.818238361772504,0,0,0,0,0,0,0,0,0,0,0,0,0.591534000199219,0.505754070234305,0.241011029883482,0.110293972732394,0.217879444092406,0,0.404493924480493,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0.301586917234893,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0.447792613514241,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00253235151642,3.22283461275637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,0,1.15314040419064,1.65896526242959,4.55210013849975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0.670302275535787,0,0,0.43050537267123,0,1.33029046061003,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67121139316383,0.296964680832639,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.261177619741208,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0.391102765469606,0.0801588202515337,0,0,0,0,0,0,0,0.942776138467182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0063040627978,0,0,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.258915569475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.653150243690884,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:39778698..39778748,- | |||
}} |
Revision as of 15:20, 20 January 2014
Short description: | p@chr17:39778698..39778748, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39778698..39778748, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 6.22e-25 | 3 |
epithelial cell of esophagus | 2.25e-19 | 1 |
endo-epithelial cell | 2.19e-15 | 42 |
respiratory epithelial cell | 3.07e-13 | 13 |
endodermal cell | 4.14e-11 | 58 |
Ontology term | p-value | n |
---|---|---|
prostate gland | 1.67e-07 | 11 |
male accessory sex gland | 1.67e-07 | 11 |
embryonic cloacal epithelium | 1.67e-07 | 11 |
epithelium of hindgut | 1.67e-07 | 11 |
urogenital sinus epithelium | 1.67e-07 | 11 |
prostate bud | 1.67e-07 | 11 |
prostate field | 1.67e-07 | 11 |
esophagus | 2.47e-07 | 3 |
esophageal region | 2.47e-07 | 3 |
sex gland | 5.98e-07 | 12 |
male reproductive gland | 5.98e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.69e-19 | 1 |
keratoacanthoma | 4.69e-19 | 1 |
skin carcinoma | 3.27e-10 | 2 |
skin cancer | 3.27e-10 | 2 |
integumentary system cancer | 3.27e-10 | 2 |