FFCP PHASE1:Hg19::chr17:60837528..60837555,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:60837528..60837555,- | |||
|id=chr17:60837528..60837555,- | |||
|ontology_enrichment_celltype=CL:0000192!3.24e-30!42;CL:0000514!3.24e-30!42;CL:0000359!9.80e-25!32;CL:0000680!1.32e-23!57;CL:0000056!1.32e-23!57;CL:0000355!1.32e-23!57;CL:0000055!1.87e-22!180;CL:0000187!7.88e-21!54;CL:0000183!4.32e-18!59;CL:0000393!1.33e-17!60;CL:0000211!1.33e-17!60;CL:0000057!1.59e-12!75;CL:0002620!2.33e-11!23;CL:0002539!4.65e-11!10;CL:0000222!1.79e-08!119;CL:0002595!2.74e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.69e-29;32!CL:0002595;3.19e-21;5!CL:0000192;2.23e-18;43!CL:0002592;4.35e-14;3!CL:0002615;8.71e-13;3!CL:0002539;1.23e-10;10!CL:0002561;2.18e-10;2!CL:0002593;1.71e-09;2!CL:0002195;2.26e-09;2!CL:0002571;2.26e-09;2!CL:0000187;3.54e-09;55!CL:0000136;6.30e-08;13!CL:0000393;3.59e-07;61!CL:0000211;3.59e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.32e-30,32;CL:0000192,1.92e-24,43;CL:0000514,1.92e-24,43;CL:0000680,1.17e-21,58;CL:0000056,1.17e-21,58;CL:0000355,1.17e-21,58;CL:0002595,1.59e-21,5;CL:0000187,3.13e-18,55;CL:0000393,4.79e-16,61;CL:0000211,4.79e-16,61;CL:0002592,3.44e-14,3;CL:0002615,1.17e-12,3;CL:0002539,1.57e-10,10;CL:0002561,2.19e-10,2;CL:0002593,1.22e-09,2;CL:0002195,2.13e-09,2;CL:0002571,2.13e-09,2;CL:0000222,3.04e-09,121;CL:0000136,8.71e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;2.23e-18;43!CL:0000355;3.82e-12;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!3.19e-21!61;UBERON:0002036!3.19e-21!61;UBERON:0003082!3.19e-21!61;UBERON:0000914!2.00e-20!83;UBERON:0002329!2.00e-20!83;UBERON:0003077!2.00e-20!83;UBERON:0003059!2.00e-20!83;UBERON:0007282!2.00e-20!83;UBERON:0009618!2.00e-20!83;UBERON:0007285!2.00e-20!83;UBERON:0004290!3.75e-20!70;UBERON:0002385!3.76e-20!63;UBERON:0001015!3.76e-20!63;UBERON:0000383!3.76e-20!63;UBERON:0001637!2.06e-18!42;UBERON:0003509!2.06e-18!42;UBERON:0004572!2.06e-18!42;UBERON:0004573!1.84e-16!33;UBERON:0004571!1.84e-16!33;UBERON:0000486!2.54e-15!82;UBERON:0004872!4.57e-15!84;UBERON:0001981!2.07e-13!60;UBERON:0007500!2.07e-13!60;UBERON:0004537!2.07e-13!60;UBERON:0006965!2.07e-13!60;UBERON:0002100!5.14e-13!216;UBERON:0005256!6.60e-13!143;UBERON:0000475!7.75e-12!365;UBERON:0003104!2.92e-11!238;UBERON:0009142!2.92e-11!238;UBERON:0001135!3.24e-11!15;UBERON:0004237!4.65e-11!10;UBERON:0004695!4.65e-11!10;UBERON:0002111!4.65e-11!10;UBERON:0004178!4.65e-11!10;UBERON:0000055!1.93e-10!69;UBERON:0003914!1.19e-09!118;UBERON:0002049!1.37e-09!79;UBERON:0007798!1.37e-09!79;UBERON:0000490!9.44e-09!138;UBERON:0000481!1.14e-08!347;UBERON:0000468!1.15e-08!659;UBERON:0003834!2.74e-08!5;UBERON:0001533!2.74e-08!5;UBERON:0000926!7.94e-08!448;UBERON:0004120!7.94e-08!448;UBERON:0006603!7.94e-08!448;UBERON:0000467!9.69e-08!625;UBERON:0000480!1.13e-07!626;UBERON:0000947!1.78e-07!21;UBERON:0010191!1.78e-07!21;UBERON:0004535!1.79e-07!110;UBERON:0001009!5.11e-07!113;UBERON:0003513!7.95e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.69e-22;33!UBERON:0004571;7.69e-22;33!UBERON:0003834;3.19e-21;5!UBERON:0001533;3.19e-21;5!UBERON:0001637;1.26e-18;42!UBERON:0003509;1.26e-18;42!UBERON:0004572;1.26e-18;42!UBERON:0003513;4.30e-15;7!UBERON:0003498;4.35e-14;3!UBERON:0005985;4.35e-14;3!UBERON:0001621;4.35e-14;3!UBERON:0003688;5.01e-11;6!UBERON:0002358;5.01e-11;6!UBERON:0003684;5.01e-11;6!UBERON:0001178;5.01e-11;6!UBERON:0004237;1.23e-10;10!UBERON:0004695;1.23e-10;10!UBERON:0002111;1.23e-10;10!UBERON:0004178;1.23e-10;10!UBERON:0005933;2.18e-10;2!UBERON:0005942;2.18e-10;2!UBERON:0005932;2.18e-10;2!UBERON:0007500;8.15e-10;56!UBERON:0001981;8.15e-10;56!UBERON:0004537;8.15e-10;56!UBERON:0002456;1.71e-09;2!UBERON:0000055;5.28e-08;65!UBERON:0004457;2.22e-07;9!UBERON:0000042;2.22e-07;9!UBERON:0003914;4.27e-07;74!UBERON:0001135;5.52e-07;15!UBERON:0000947;7.90e-07;21!UBERON:0010191;7.90e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,6.74e-26,33;UBERON:0004571,6.74e-26,33;UBERON:0001637,1.60e-25,42;UBERON:0003509,1.60e-25,42;UBERON:0004572,1.60e-25,42;UBERON:0003834,1.59e-21,5;UBERON:0001533,1.59e-21,5;UBERON:0001134,5.72e-20,62;UBERON:0002036,5.72e-20,62;UBERON:0003082,5.72e-20,62;UBERON:0002385,3.34e-19,64;UBERON:0001015,3.34e-19,64;UBERON:0000383,3.34e-19,64;UBERON:0007500,5.36e-17,59;UBERON:0001981,5.36e-17,59;UBERON:0004537,5.36e-17,59;UBERON:0006965,5.36e-17,59;UBERON:0007503,7.05e-17,78;UBERON:0002329,7.26e-17,71;UBERON:0003059,7.26e-17,71;UBERON:0007282,7.26e-17,71;UBERON:0004290,7.26e-17,71;UBERON:0009618,7.26e-17,71;UBERON:0003077,1.44e-16,72;UBERON:0007285,1.44e-16,72;UBERON:0007524,2.79e-16,73;UBERON:0004872,8.50e-16,83;UBERON:0003513,2.64e-15,7;UBERON:0003914,2.87e-15,117;UBERON:0003498,9.36e-15,5;UBERON:0005985,9.36e-15,5;UBERON:0000055,3.21e-14,68;UBERON:0001621,3.44e-14,3;UBERON:0005256,3.89e-14,122;UBERON:0000486,8.76e-14,83;UBERON:0002049,1.78e-13,78;UBERON:0007798,1.78e-13,78;UBERON:0002100,4.72e-12,199;UBERON:0000490,6.87e-12,148;UBERON:0003688,5.59e-11,6;UBERON:0002358,5.59e-11,6;UBERON:0003684,5.59e-11,6;UBERON:0001178,5.59e-11,6;UBERON:0004237,1.57e-10,10;UBERON:0004695,1.57e-10,10;UBERON:0002111,1.57e-10,10;UBERON:0004178,1.57e-10,10;UBERON:0003104,1.63e-10,160;UBERON:0009142,1.63e-10,160;UBERON:0005933,2.19e-10,2;UBERON:0005942,2.19e-10,2;UBERON:0005932,2.19e-10,2;UBERON:0002456,1.22e-09,2;UBERON:0004535,1.32e-09,109;UBERON:0001009,3.10e-09,112;UBERON:0000025,4.14e-07,192;UBERON:0000926,5.09e-07,315;UBERON:0004120,5.09e-07,315;UBERON:0006603,5.09e-07,315;UBERON:0009569,5.47e-07,112;UBERON:0001135,6.47e-07,15;UBERON:0000947,9.18e-07,21;UBERON:0010191,9.18e-07,21 | |||
|phase1_expression=0.54503513781167,4.49611100171065,1.55049844505568,1.0007329835313,1.34088328328186,3.48935409640147,0,0.631719873426831,0,9.58362352355885,8.37361401566913,0,0,0,0,0,0.602694528023977,0.730310090387373,0.975865597581014,0,0,0,0,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,2.64818361626438,0.860509862246441,0,0,0,0.49333509683432,0,1.21239604862719,0.163461903113459,0,0,0,0,0,0.149448680551801,0.117434498643765,0.323745888736263,0,0.816616685019573,0,0.309977343527296,0,0.494533858557114,0,0,0.168336113954066,0,2.77064115484183,0.877955241761676,0.612975591598039,0.150238058906597,7.14622753908133,0.179389635688862,0.427114777637135,0.211931901159562,0.600182192168805,2.06105058476878,1.03056216018252,0.18611685633159,0.168776332241266,0,0.504867548488229,0.460249493211497,0,0.710019185033229,0.806016785821122,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,19.0390850493111,29.597058748453,0.118306800039844,0,0.723033089650446,0,0,0.237270619111097,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0.26593811658487,0,0,0,0,2.7165818795048,0,1.64648067356154,0,1.42156779497018,0.791951872933429,0,0,0,0,0,0,0,0,0,1.59259437334337,0.205476322550383,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,1.78428988797162,0.788512075169673,0.819989904948992,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0.303127571446259,4.99306318531491,1.5119514666484,0,0.460385919864187,0,0.256278298511402,0,1.44768529029247,0,0,0,0,0,0,0,0.200506470303285,0,0.459257792658427,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0.929691098594572,3.77774816196768,4.1822236209636,1.23213432070436,1.06461206063404,4.34966496037536,0,1.14499909393593,0,0,1.33441135746677,1.02359116524534,0,0.318203247925937,0,0.539617372749944,0.274537029736055,0.117812402345686,2.83055474202642,11.0957224821106,3.79132610615083,0.48763373908959,1.70599442741899,3.16950440270266,0,0.282810863907425,0,1.65409603063837,2.65375590096488,3.5076070820301,0.578775534266688,0.655894752046633,0.811641507850816,0.30982349809975,0.281695602532241,0.717056761020258,0.392996164052485,1.07001315444375,0,0,0,0.379473173765715,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,1.18785872333055,0,0,0,0,0,0,0,0.276283915531148,0,3.78394125257973,0,0.622079175323615,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0.1137934482855,0,0.945550727071745,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0,0,0,0,0,0,1.56441106187842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.209818352539992,0,0,0,0,0,0,0,3.45688596480507,0.653174720218818,0,0,0,0,0,0,0,0,0,0,0.427149650270779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0.15543720058278,0.147855149989634,0.318593534327405,0,0.155262956876259,0,0,0.521745061811734,0,0.761610424337591,0,0.181848659202559,0,0.464033759878494,0.398095888698616,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70254786070051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0.894843454382338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0.730336388246517,0,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr17:60837528..60837555,- | |||
}} |
Revision as of 16:42, 20 January 2014
Short description: | p@chr17:60837528..60837555, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:60837528..60837555, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.32e-30 | 32 |
smooth muscle cell | 1.92e-24 | 43 |
smooth muscle myoblast | 1.92e-24 | 43 |
muscle precursor cell | 1.17e-21 | 58 |
myoblast | 1.17e-21 | 58 |
multi-potent skeletal muscle stem cell | 1.17e-21 | 58 |
smooth muscle cell of the subclavian artery | 1.59e-21 | 5 |
muscle cell | 3.13e-18 | 55 |
electrically responsive cell | 4.79e-16 | 61 |
electrically active cell | 4.79e-16 | 61 |
smooth muscle cell of the coronary artery | 3.44e-14 | 3 |
adipocyte of omentum tissue | 1.17e-12 | 3 |
aortic smooth muscle cell | 1.57e-10 | 10 |
outer root sheath cell | 2.19e-10 | 2 |
smooth muscle cell of the internal thoracic artery | 1.22e-09 | 2 |
hepatic stem cell | 2.13e-09 | 2 |
hepatic mesenchymal stem cell | 2.13e-09 | 2 |
mesodermal cell | 3.04e-09 | 121 |
fat cell | 8.71e-07 | 15 |