FFCP PHASE1:Hg19::chr17:77997890..77997901,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1164 | |||
|description=CAGE_peak_at_chr17:77997890..77997901,+ | |||
|id=chr17:77997890..77997901,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;6.96e-21;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.87e-53;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004733!8.58e-25!12;UBERON:0002028!8.58e-25!12;UBERON:0007277!8.58e-25!12;UBERON:0002680!3.59e-23!9;UBERON:0001895!3.59e-23!9;UBERON:0010092!3.59e-23!9;UBERON:0004732!7.39e-23!13;UBERON:0003076!9.29e-20!15;UBERON:0003057!9.29e-20!15;UBERON:0001905!1.73e-18!2;UBERON:0002757!1.73e-18!2;UBERON:0010134!1.73e-18!2;UBERON:0002784!1.73e-18!2;UBERON:0005408!1.73e-18!2;UBERON:0001899!1.73e-18!2;UBERON:0002148!3.98e-17!2;UBERON:0009662!3.98e-17!2;UBERON:0007023!9.46e-16!115;UBERON:0001017!1.17e-14!82;UBERON:0000073!1.51e-14!94;UBERON:0001016!1.51e-14!94;UBERON:0005743!6.87e-14!86;UBERON:0002037!1.65e-13!6;UBERON:0006215!1.65e-13!6;UBERON:0001049!6.01e-13!57;UBERON:0005068!6.01e-13!57;UBERON:0006241!6.01e-13!57;UBERON:0007135!6.01e-13!57;UBERON:0000955!1.68e-12!69;UBERON:0006238!1.68e-12!69;UBERON:0002616!1.83e-12!59;UBERON:0003075!7.52e-12!86;UBERON:0007284!7.52e-12!86;UBERON:0000988!9.70e-12!3;UBERON:0006331!9.70e-12!3;UBERON:0002346!3.07e-11!90;UBERON:0002298!7.37e-10!8;UBERON:0003296!1.06e-09!4;UBERON:0010133!1.06e-09!4;UBERON:0001301!1.15e-09!1;UBERON:0000153!3.76e-07!129;UBERON:0007811!3.76e-07!129;UBERON:0004121!3.98e-07!169;UBERON:0000924!6.57e-07!173;UBERON:0006601!6.57e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.56e-79;2!UBERON:0002757;1.56e-79;2!UBERON:0010134;1.56e-79;2!UBERON:0005408;1.56e-79;2!UBERON:0001899;1.56e-79;2!UBERON:0003296;1.81e-40;4!UBERON:0010133;1.81e-40;4!UBERON:0002784;1.81e-40;4!UBERON:0002037;2.72e-27;6!UBERON:0001894;1.14e-23;7!UBERON:0002680;1.35e-18;9!UBERON:0001895;1.35e-18;9!UBERON:0004733;3.14e-14;12!UBERON:0002028;3.14e-14;12!UBERON:0004732;3.22e-13;13!UBERON:0000073;4.60e-07;53!UBERON:0002616;4.60e-07;53!UBERON:0001017;7.02e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.56e-79,2;UBERON:0002757,1.56e-79,2;UBERON:0010134,1.56e-79,2;UBERON:0005408,1.56e-79,2;UBERON:0001899,1.56e-79,2;UBERON:0003296,1.81e-40,4;UBERON:0010133,1.81e-40,4;UBERON:0002784,1.81e-40,4;UBERON:0002037,2.72e-27,6;UBERON:0006215,2.72e-27,6;UBERON:0001894,1.14e-23,7;UBERON:0006222,1.14e-23,7;UBERON:0002680,1.35e-18,9;UBERON:0001895,1.35e-18,9;UBERON:0010092,1.35e-18,9;UBERON:0004733,3.14e-14,12;UBERON:0002028,3.14e-14,12;UBERON:0007277,3.14e-14,12;UBERON:0004732,3.22e-13,13;UBERON:0001017,1.45e-12,81;UBERON:0000073,1.93e-12,53;UBERON:0002616,1.93e-12,53;UBERON:0001049,7.99e-12,56;UBERON:0005068,7.99e-12,56;UBERON:0006241,7.99e-12,56;UBERON:0007135,7.99e-12,56;UBERON:0003076,1.34e-11,15;UBERON:0003057,1.34e-11,15;UBERON:0001016,2.13e-11,89;UBERON:0000955,9.44e-10,68;UBERON:0006238,9.44e-10,68;UBERON:0003075,2.54e-08,82;UBERON:0007284,2.54e-08,82;UBERON:0002346,5.76e-08,86 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60279707715243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,3.05163472634166,5.86070077635491,0.295547618953547,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.776503360757966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511577485214607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.82131652290458,7.39824188881413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439762066981716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:77997890..77997901,+ | |||
}} |
Revision as of 17:50, 20 January 2014
Short description: | p@chr17:77997890..77997901, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:77997890..77997901, + |
Coexpression cluster: | C1164_pineal_cerebellum_neuroblastoma_insula_rectum_frontal_olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.56e-79 | 2 |
regional part of epithalamus | 1.56e-79 | 2 |
secretory circumventricular organ | 1.56e-79 | 2 |
circumventricular organ | 1.56e-79 | 2 |
epithalamus | 1.56e-79 | 2 |
gland of diencephalon | 1.81e-40 | 4 |
neuroendocrine gland | 1.81e-40 | 4 |
regional part of diencephalon | 1.81e-40 | 4 |
cerebellum | 2.72e-27 | 6 |
rhombic lip | 2.72e-27 | 6 |
diencephalon | 1.14e-23 | 7 |
future diencephalon | 1.14e-23 | 7 |
regional part of metencephalon | 1.35e-18 | 9 |
metencephalon | 1.35e-18 | 9 |
future metencephalon | 1.35e-18 | 9 |
segmental subdivision of hindbrain | 3.14e-14 | 12 |
hindbrain | 3.14e-14 | 12 |
presumptive hindbrain | 3.14e-14 | 12 |
segmental subdivision of nervous system | 3.22e-13 | 13 |
central nervous system | 1.45e-12 | 81 |
regional part of nervous system | 1.93e-12 | 53 |
regional part of brain | 1.93e-12 | 53 |
neural tube | 7.99e-12 | 56 |
neural rod | 7.99e-12 | 56 |
future spinal cord | 7.99e-12 | 56 |
neural keel | 7.99e-12 | 56 |
posterior neural tube | 1.34e-11 | 15 |
chordal neural plate | 1.34e-11 | 15 |
nervous system | 2.13e-11 | 89 |
brain | 9.44e-10 | 68 |
future brain | 9.44e-10 | 68 |
neural plate | 2.54e-08 | 82 |
presumptive neural plate | 2.54e-08 | 82 |
neurectoderm | 5.76e-08 | 86 |