FFCP PHASE1:Hg19::chr19:49864746..49864780,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8463 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11715 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc002pnh.2_5end | |||
|description=CAGE_peak_2_at_TEAD2_5end | |||
|id=chr19:49864746..49864780,- | |||
|ontology_enrichment_celltype=CL:0002321!1.27e-14!248;CL:0000220!6.77e-14!246;CL:0000055!1.96e-13!180;CL:0000222!7.80e-12!119;CL:0002139!2.57e-11!24;CL:0000115!3.30e-11!35;CL:0002078!1.88e-09!44;CL:0000071!4.04e-09!18;CL:0002546!4.04e-09!18;CL:0000393!2.44e-08!60;CL:0000211!2.44e-08!60;CL:0000133!2.46e-08!59;CL:0000183!3.20e-08!59;CL:0000213!1.79e-07!57;CL:0000215!1.79e-07!57;CL:0002319!3.19e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.43e-14;24!CL:0000115;2.52e-12;36!CL:0000071;2.30e-11;18!CL:0002319;1.01e-08;25!CL:0002078;2.79e-08;45!CL:1000449;6.04e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,9.92e-15,36;CL:0002139,2.13e-14,24;CL:0002078,9.06e-13,45;CL:0000071,1.65e-11,18;CL:0002546,1.65e-11,18;CL:0002321,4.35e-11,250;CL:0000222,2.71e-10,121;CL:0002319,9.57e-09,25;CL:0000133,5.43e-08,59;CL:0000213,1.13e-07,58;CL:0000215,1.13e-07,58;CL:0000393,7.31e-07,61;CL:0000211,7.31e-07,61;CL:1000449,7.64e-07,15;CL:0000047,9.65e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002546;2.30e-11;18 | |||
|ontology_enrichment_disease=DOID:3095!3.93e-07!22;DOID:2994!3.93e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.66e-08;22!DOID:2994;4.66e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.61e-08,22;DOID:2994,3.61e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000490!7.77e-14!138;UBERON:0003914!1.15e-13!118;UBERON:0000119!2.33e-13!312;UBERON:0000481!3.58e-13!347;UBERON:0000483!1.63e-12!309;UBERON:0002049!3.42e-12!79;UBERON:0007798!3.42e-12!79;UBERON:0005256!3.50e-12!143;UBERON:0000468!1.30e-11!659;UBERON:0002100!1.91e-11!216;UBERON:0000475!7.70e-11!365;UBERON:0003104!9.71e-11!238;UBERON:0009142!9.71e-11!238;UBERON:0000477!4.36e-10!286;UBERON:0000487!2.17e-09!22;UBERON:0001986!4.04e-09!18;UBERON:0004638!4.04e-09!18;UBERON:0004852!4.04e-09!18;UBERON:0006914!1.96e-08!25;UBERON:0004535!2.80e-08!110;UBERON:0000055!3.18e-08!69;UBERON:0001009!3.35e-08!113;UBERON:0004111!4.61e-08!241;UBERON:0004872!4.80e-08!84;UBERON:0000019!5.26e-08!19;UBERON:0000047!5.26e-08!19;UBERON:0004088!5.26e-08!19;UBERON:0003072!5.26e-08!19;UBERON:0003071!5.26e-08!19;UBERON:0004128!5.26e-08!19;UBERON:0007625!8.74e-08!11;UBERON:0000970!9.02e-08!20;UBERON:0001456!1.25e-07!21;UBERON:0000922!1.36e-07!612;UBERON:0000020!4.78e-07!23;UBERON:0005177!5.42e-07!107;UBERON:0003103!5.47e-07!69;UBERON:0002104!6.05e-07!21;UBERON:0003064!9.80e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;3.64e-12;22!UBERON:0004638;2.30e-11;18!UBERON:0001986;2.30e-11;18!UBERON:0004852;2.30e-11;18!UBERON:0000019;6.36e-11;19!UBERON:0000047;6.36e-11;19!UBERON:0004088;6.36e-11;19!UBERON:0010230;6.36e-11;19!UBERON:0006914;6.83e-11;25!UBERON:0001456;1.03e-10;21!UBERON:0000970;4.88e-10;20!UBERON:0007625;8.63e-10;11!UBERON:0000490;1.12e-09;33!UBERON:0000020;1.37e-09;23!UBERON:0002104;3.03e-09;21!UBERON:0001032;6.71e-09;24!UBERON:0004456;6.71e-09;24!UBERON:0001801;5.91e-08;14!UBERON:0006555;6.04e-07;15!UBERON:0004819;6.04e-07;15!UBERON:0001285;6.04e-07;15!UBERON:0007684;6.04e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000487,3.14e-12,22;UBERON:0004638,1.65e-11,18;UBERON:0001986,1.65e-11,18;UBERON:0004852,1.65e-11,18;UBERON:0006914,5.55e-11,25;UBERON:0003104,2.28e-10,160;UBERON:0009142,2.28e-10,160;UBERON:0000019,6.79e-10,20;UBERON:0000047,6.79e-10,20;UBERON:0010312,6.79e-10,20;UBERON:0004088,6.79e-10,20;UBERON:0010230,6.79e-10,20;UBERON:0003072,6.79e-10,20;UBERON:0004128,6.79e-10,20;UBERON:0003071,6.79e-10,20;UBERON:0001456,9.15e-10,22;UBERON:0007625,9.35e-10,11;UBERON:0003914,1.09e-09,117;UBERON:0002049,1.09e-09,78;UBERON:0007798,1.09e-09,78;UBERON:0000119,2.51e-09,309;UBERON:0000970,4.11e-09,21;UBERON:0002104,4.11e-09,21;UBERON:0000490,7.13e-09,148;UBERON:0000020,1.46e-08,24;UBERON:0001032,1.46e-08,24;UBERON:0004456,1.46e-08,24;UBERON:0000483,1.59e-08,306;UBERON:0001801,6.98e-08,14;UBERON:0004535,4.45e-07,109;UBERON:0004211,7.64e-07,15;UBERON:0009773,7.64e-07,15;UBERON:0001231,7.64e-07,15;UBERON:0001285,7.64e-07,15;UBERON:0007684,7.64e-07,15;UBERON:0004208,7.64e-07,15 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.140954404095971,0,0.446961094427288,0,0,0,0.261185628199839,2.21160542851358,6.28021051175185,0.436882744260345,0.527533956456907,8.66364470720326,3.31397375727916,2.01697543935533,1.20538905604795,0.730310090387373,1.95173119516203,5.66356867153224,4.69201589861782,5.95563970808367,4.86601178122796,3.14811177667634,2.25976751270645,0,0,0.0787107813136792,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,2.29900975981793,0.661044872784862,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,1.91793842765295,0.361439152384566,2.50668955317945,0.579386075843295,1.5905718941022,0,7.09011128730509,6.43015252641436,9.22265249777823,0.982343066232845,0,0,0,0,0,0.238490624305342,0,0,3.18019851786728,3.4409383804245,5.20710752411391,2.26123176769604,5.87299210693868,6.87795104850169,2.92592953151535,2.32575083252396,2.49036383880697,4.68608857870538,4.43112248820062,2.28081631715554,2.92874469057803,1.83831540172934,7.29127753093584,3.12549048994279,2.69435247151404,2.13961812918312,9.19899824795299,4.74632829784064,6.22885929363385,0,0,0,0.993943903390637,0.886413581652058,0.662045904066094,0,0,0.560677600142307,7.47242970107935,2.22000793575444,2.48968828319813,2.02066008104532,2.45192854670188,3.32986340818849,4.03323147135999,3.51482147750695,0,1.71141546463335,0,0.704606991862589,0.809364721840658,0.140450806702248,0.816616685019573,1.71968044236475,0.929932030581889,0,0.741800787835671,1.82032272387605,0.718618141816238,3.03005005117319,1.50142223846357,0,1.31693286264251,0.612975591598039,1.05166641234618,0.567160915800105,1.4351170855109,0.85422955527427,1.48352330811693,0.900273288253207,1.33968288009971,1.03056216018252,0.18611685633159,1.18143432568886,1.46155507741798,3.78650661366172,1.74894807420369,1.13152239773168,5.32514388774922,1.61203357164224,2.88253006927829,0.193260853163297,0,0,5.85473789422058,7.1566074893602,7.32021840077966,4.76840853070704,8.32658807889574,6.56959246336494,1.56449532329816,1.92972281457866,0,0.928735856063958,0,0.118306800039844,0.168584690078102,0.241011029883482,0,0.217879444092406,0.237270619111097,0.269662616320329,0.392442930250692,0.38474715694639,0.738155454624648,5.60967095213783,6.5851841813024,2.94017422771084,0,0.982827216677626,1.18157981336281,0,0.491953754172454,7.72055146343365,0.219500570817251,0,0,0.740707561268237,3.9096996637239,2.07986957055916,4.3299402607582,12.7523445472585,6.57488687720601,2.7429625074604,3.70388410061289,2.85381228351897,1.58040879591855,0,0,0,0,0,0.671928512795438,0.141775097242386,0.179117045405697,0,0,0,0,0,0,0.12624243342638,0.253991577168676,0.381988425558278,1.17217447210047,0,0.102827492703324,0.600686115687835,0,3.1396703616701,5.23152082599936,3.0802080044799,1.68053230485111,3.57656445851882,0,3.98907174877306,1.04007436911366,2.05765899409714,4.25547396069835,1.8649552531127,2.85955987316295,6.51145926469732,4.11620168390384,0,2.84313558994037,0.791951872933429,3.31583314765545,0.871533458600294,1.19967589418468,0,0,0,0.479249710983165,0,5.70547620162874,0.579125226670317,1.43833425785268,0.895304816199478,0,0,0,0,7.6228387266739,7.8083912314573,2.31986643833309,2.34522771468088,3.82763250991898,0,0,0,6.62534055283355,11.0037514633129,4.6115054028955,1.45579603071565,0.178428988797162,0.788512075169673,0.117141414992713,1.80567659836631,0,2.0694614258501,2.65690239414175,1.10621501125022,1.39013783148933,9.59425671567429,8.5785855952714,0,0,0,0.606255142892519,1.66435439510497,1.20956117331872,0,0.306923946576125,0,0.128139149255701,0,0.321707842287215,0,0,0.887808626565635,0.328508624055237,0.519254429183621,0.116210378459959,0.966875596732978,1.80455823272956,0,1.60740227430449,0.728364672026868,3.01586154406675,6.31679458070376,2.23344477602803,6.27479815341484,2.92278449306521,4.85537492907228,1.13733384070897,1.36074964221213,1.29549549661284,4.62681758070868,9.7540717515787,15.0506932156456,0,0,7.16399215110971,0,0,4.10320200186223,18.3688201591835,3.57916234130733,1.03041011647722,5.21945949464557,6.43574099380586,0,0,0,5.60690166094307,1.54048617114644,1.38153307253517,0.964856007391714,3.86712881525785,3.0453505721988,2.72725207731523,9.25933170726069,0.165284915360978,0.192190067365106,0.382838137483752,0.10115778085555,0.464845549297286,0.31481234683064,1.3940745403212,0.616067160352178,1.06461206063404,0.869932992075073,1.8532421910392,0,1.86079184679834,0.316379424718726,1.14378116354295,3.58256907835867,1.28381696410176,2.22742273548156,1.56989728039846,1.2591072030832,1.09814811894422,2.23843564456804,0.808729926293264,0,0.842516912477962,2.92580243453754,0.243713489631284,0,1.63799893689583,2.96951407102797,1.13008116620243,2.2054613741845,0.66343897524122,0.876901770507525,3.47265320560013,1.9676842561399,0,0.30982349809975,1.69017361519345,1.00387946542836,0.4912452050656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| |||
|short_description=p2@TEAD2 | |||
}} |
Revision as of 00:27, 21 January 2014
Short description: | p2@TEAD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TEAD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc002pnh.2_5end |
EntrezGene: | TEAD2 |
HGNC: | 11715 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 9.92e-15 | 36 |
endothelial cell of vascular tree | 2.13e-14 | 24 |
meso-epithelial cell | 9.06e-13 | 45 |
blood vessel endothelial cell | 1.65e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.65e-11 | 18 |
embryonic cell | 4.35e-11 | 250 |
mesodermal cell | 2.71e-10 | 121 |
neural cell | 9.57e-09 | 25 |
neurectodermal cell | 5.43e-08 | 59 |
lining cell | 1.13e-07 | 58 |
barrier cell | 1.13e-07 | 58 |
electrically responsive cell | 7.31e-07 | 61 |
electrically active cell | 7.31e-07 | 61 |
epithelial cell of nephron | 7.64e-07 | 15 |
neuronal stem cell | 9.65e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
simple squamous epithelium | 3.14e-12 | 22 |
blood vessel endothelium | 1.65e-11 | 18 |
endothelium | 1.65e-11 | 18 |
cardiovascular system endothelium | 1.65e-11 | 18 |
squamous epithelium | 5.55e-11 | 25 |
mesenchyme | 2.28e-10 | 160 |
entire embryonic mesenchyme | 2.28e-10 | 160 |
camera-type eye | 6.79e-10 | 20 |
simple eye | 6.79e-10 | 20 |
immature eye | 6.79e-10 | 20 |
ocular region | 6.79e-10 | 20 |
eyeball of camera-type eye | 6.79e-10 | 20 |
optic cup | 6.79e-10 | 20 |
optic vesicle | 6.79e-10 | 20 |
eye primordium | 6.79e-10 | 20 |
face | 9.15e-10 | 22 |
pigment epithelium of eye | 9.35e-10 | 11 |
epithelial tube | 1.09e-09 | 117 |
vasculature | 1.09e-09 | 78 |
vascular system | 1.09e-09 | 78 |
cell layer | 2.51e-09 | 309 |
eye | 4.11e-09 | 21 |
visual system | 4.11e-09 | 21 |
unilaminar epithelium | 7.13e-09 | 148 |
sense organ | 1.46e-08 | 24 |
sensory system | 1.46e-08 | 24 |
entire sense organ system | 1.46e-08 | 24 |
epithelium | 1.59e-08 | 306 |
anterior segment of eyeball | 6.98e-08 | 14 |
cardiovascular system | 4.45e-07 | 109 |
nephron epithelium | 7.64e-07 | 15 |
renal tubule | 7.64e-07 | 15 |
nephron tubule | 7.64e-07 | 15 |
nephron | 7.64e-07 | 15 |
uriniferous tubule | 7.64e-07 | 15 |
nephrogenic mesenchyme | 7.64e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.61e-08 | 22 |
germ cell cancer | 3.61e-08 | 22 |