FFCP PHASE1:Hg19::chr2:111562758..111562766,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55289 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25621 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-129bp_to_ENST00000433706_5end | |||
|coexpression_cluster_id=C507 | |||
|description=CAGE_peak_5_at_ACOXL_5end | |||
|id=chr2:111562758..111562766,+ | |||
|ontology_enrichment_celltype=CL:0000080!8.91e-21!6;CL:0000838!1.43e-19!52;CL:0000945!1.96e-19!24;CL:0000826!1.96e-19!24;CL:0000542!3.47e-19!53;CL:0000051!3.47e-19!53;CL:0000988!9.23e-11!182;CL:0002087!7.20e-10!119;CL:0002031!1.99e-09!124;CL:0000738!3.19e-08!140;CL:0002032!8.45e-07!165;CL:0000837!8.45e-07!165 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004872;5.08e-07;7 | |||
|ontology_enrichment_disease=DOID:0060058!6.55e-33!10;DOID:630!9.36e-15!1;DOID:0050177!9.36e-15!1;DOID:0050427!9.36e-15!1;DOID:2355!1.41e-14!1;DOID:0060060!1.61e-14!1;DOID:0060061!1.61e-14!1;DOID:8691!1.61e-14!1;DOID:2531!4.38e-09!51;DOID:0060083!4.38e-09!51;DOID:74!6.15e-08!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002331!1.00e-12!10;UBERON:0000358!1.00e-12!10;UBERON:0000307!1.00e-12!10;UBERON:0000091!1.00e-12!10;UBERON:0000087!1.00e-12!10;UBERON:0007806!1.00e-12!10;UBERON:0008780!1.00e-12!10;UBERON:0005728!1.00e-12!10;UBERON:0000178!1.14e-08!15;UBERON:0000179!1.14e-08!15;UBERON:0000463!1.14e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;8.13e-17;10!UBERON:0002106;1.22e-14;3!UBERON:0000178;1.42e-11;15!UBERON:0000179;1.42e-11;15!UBERON:0000463;1.42e-11;15!UBERON:0002390;1.98e-11;32!UBERON:0004177;2.53e-09;5!UBERON:0005057;2.53e-09;5!UBERON:0000478;1.31e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,8.81e-17,10;UBERON:0000358,8.81e-17,10;UBERON:0000307,8.81e-17,10;UBERON:0000091,8.81e-17,10;UBERON:0000087,8.81e-17,10;UBERON:0007010,8.81e-17,10;UBERON:0007806,8.81e-17,10;UBERON:0008780,8.81e-17,10;UBERON:0005728,8.81e-17,10;UBERON:0002106,1.22e-14,3;UBERON:0004854,1.22e-14,3;UBERON:0009034,1.22e-14,3;UBERON:0002095,1.22e-14,3;UBERON:0004782,1.22e-14,3;UBERON:0003281,1.22e-14,3;UBERON:0009664,1.22e-14,3;UBERON:0002296,1.22e-14,3;UBERON:0005602,1.22e-14,3;UBERON:0001179,1.22e-14,3;UBERON:0006293,1.22e-14,3;UBERON:0000178,1.50e-11,15;UBERON:0000179,1.50e-11,15;UBERON:0000463,1.50e-11,15;UBERON:0000478,1.36e-07,24;UBERON:0004177,5.08e-07,7;UBERON:0005057,5.08e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35393286007176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,1.11207545051853,1.67075119208729,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8402114799552,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.59788161329744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | |||
|short_description=p5@ACOXL | |||
}} |
Revision as of 04:54, 21 January 2014
Short description: | p5@ACOXL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ACOXL_5end |
Coexpression cluster: | C507_splenic_hairy_b_cord_B_xeroderma_mycosis |
Association with transcript: | -129bp_to_ENST00000433706_5end |
EntrezGene: | ACOXL |
HGNC: | 25621 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 8.81e-17 | 10 |
blastocyst | 8.81e-17 | 10 |
blastula | 8.81e-17 | 10 |
bilaminar disc | 8.81e-17 | 10 |
inner cell mass | 8.81e-17 | 10 |
cleaving embryo | 8.81e-17 | 10 |
connecting stalk | 8.81e-17 | 10 |
inner cell mass derived epiblast | 8.81e-17 | 10 |
extraembryonic mesoderm | 8.81e-17 | 10 |
spleen | 1.22e-14 | 3 |
gastrointestinal system mesentery | 1.22e-14 | 3 |
stomach region | 1.22e-14 | 3 |
mesentery | 1.22e-14 | 3 |
gastrointestinal system serosa | 1.22e-14 | 3 |
mesentery of stomach | 1.22e-14 | 3 |
gut mesentery | 1.22e-14 | 3 |
dorsal mesentery | 1.22e-14 | 3 |
dorsal mesogastrium | 1.22e-14 | 3 |
peritoneal cavity | 1.22e-14 | 3 |
spleen primordium | 1.22e-14 | 3 |
blood | 1.50e-11 | 15 |
haemolymphatic fluid | 1.50e-11 | 15 |
organism substance | 1.50e-11 | 15 |
extraembryonic structure | 1.36e-07 | 24 |
hemopoietic organ | 5.08e-07 | 7 |
immune organ | 5.08e-07 | 7 |