FFCP PHASE1:Hg19::chr20:36757658..36757727,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C454 | |||
|description=CAGE_peak_at_chr20:36757658..36757727,- | |||
|id=chr20:36757658..36757727,- | |||
|ontology_enrichment_celltype=CL:0000222!2.41e-12!119;CL:0000192!3.37e-12!42;CL:0000514!3.37e-12!42;CL:0000115!4.49e-11!35;CL:0002139!1.49e-10!24;CL:0000359!1.77e-09!32;CL:0002078!3.19e-09!44;CL:0000183!5.48e-09!59;CL:0000187!2.99e-08!54;CL:0000071!1.26e-07!18;CL:0002546!1.26e-07!18;CL:0000680!1.64e-07!57;CL:0000056!1.64e-07!57;CL:0000355!1.64e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000115;5.91e-14;36!CL:0002139;7.68e-14;24!CL:0000349;2.63e-12;19!CL:0000071;3.33e-10;18!CL:0002078;2.57e-09;45!CL:0000192;5.87e-08;43!CL:0000359;1.22e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,4.36e-17,36;CL:0000222,1.04e-14,121;CL:0002078,3.67e-14,45;CL:0002139,3.93e-14,24;CL:0000349,3.57e-12,19;CL:0000192,8.98e-11,43;CL:0000514,8.98e-11,43;CL:0000071,1.92e-10,18;CL:0002546,1.92e-10,18;CL:0000213,2.80e-09,58;CL:0000215,2.80e-09,58;CL:0000359,6.01e-08,32;CL:0000187,1.26e-07,55;CL:0000680,6.80e-07,58;CL:0000056,6.80e-07,58;CL:0000355,6.80e-07,58;CL:0002188,8.28e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;3.33e-10;18!CL:0000514;5.87e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!5.03e-26!118;UBERON:0002049!3.13e-25!79;UBERON:0007798!3.13e-25!79;UBERON:0000055!4.99e-24!69;UBERON:0004872!2.55e-21!84;UBERON:0001981!8.81e-21!60;UBERON:0007500!8.81e-21!60;UBERON:0004537!8.81e-21!60;UBERON:0006965!8.81e-21!60;UBERON:0001009!5.70e-19!113;UBERON:0000477!8.72e-19!286;UBERON:0004535!1.87e-17!110;UBERON:0004111!8.71e-17!241;UBERON:0000490!1.99e-16!138;UBERON:0000119!2.25e-15!312;UBERON:0000483!7.27e-15!309;UBERON:0000025!7.03e-14!194;UBERON:0005256!9.89e-14!143;UBERON:0001637!1.13e-13!42;UBERON:0003509!1.13e-13!42;UBERON:0004572!1.13e-13!42;UBERON:0000481!1.19e-11!347;UBERON:0002100!1.94e-11!216;UBERON:0000468!3.56e-11!659;UBERON:0004573!4.16e-11!33;UBERON:0004571!4.16e-11!33;UBERON:0003104!1.30e-09!238;UBERON:0009142!1.30e-09!238;UBERON:0000926!2.22e-09!448;UBERON:0004120!2.22e-09!448;UBERON:0006603!2.22e-09!448;UBERON:0000467!6.35e-09!625;UBERON:0000480!8.84e-09!626;UBERON:0005631!9.41e-09!14;UBERON:0000158!9.41e-09!14;UBERON:0002385!1.06e-07!63;UBERON:0001015!1.06e-07!63;UBERON:0000383!1.06e-07!63;UBERON:0001986!1.26e-07!18;UBERON:0004638!1.26e-07!18;UBERON:0004852!1.26e-07!18;UBERON:0000487!1.39e-07!22;UBERON:0006554!1.42e-07!44;UBERON:0000478!2.25e-07!24;UBERON:0001134!2.33e-07!61;UBERON:0002036!2.33e-07!61;UBERON:0003082!2.33e-07!61;UBERON:0003103!2.51e-07!69;UBERON:0000947!2.65e-07!21;UBERON:0010191!2.65e-07!21;UBERON:0000058!3.49e-07!26;UBERON:0001008!3.74e-07!45;UBERON:0002050!3.92e-07!605;UBERON:0005423!3.92e-07!605;UBERON:0003064!4.81e-07!37;UBERON:0004290!5.30e-07!70;UBERON:0000064!6.03e-07!219;UBERON:0000923!6.98e-07!604;UBERON:0005291!6.98e-07!604;UBERON:0006598!6.98e-07!604;UBERON:0002532!6.98e-07!604;UBERON:0004923!8.07e-07!57;UBERON:0000922!8.26e-07!612;UBERON:0000486!8.48e-07!82;UBERON:0006914!9.89e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;5.92e-12;24!UBERON:0003914;1.64e-11;74!UBERON:0007500;1.34e-10;56!UBERON:0001981;1.34e-10;56!UBERON:0004537;1.34e-10;56!UBERON:0000055;1.41e-10;65!UBERON:0002049;1.59e-10;75!UBERON:0007798;1.59e-10;75!UBERON:0004638;3.33e-10;18!UBERON:0001986;3.33e-10;18!UBERON:0004852;3.33e-10;18!UBERON:0004573;5.75e-10;33!UBERON:0004571;5.75e-10;33!UBERON:0001637;6.34e-10;42!UBERON:0003509;6.34e-10;42!UBERON:0004572;6.34e-10;42!UBERON:0000487;3.64e-09;22!UBERON:0006914;1.18e-08;25!UBERON:0001009;1.75e-08;112!UBERON:0005631;2.61e-08;10!UBERON:0000158;2.61e-08;10!UBERON:0000947;1.89e-07;21!UBERON:0010191;1.89e-07;21!UBERON:0010260;2.83e-07;9!UBERON:0003513;3.88e-07;7!UBERON:0000490;4.90e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,5.11e-27,117;UBERON:0000055,1.53e-26,68;UBERON:0002049,1.57e-25,78;UBERON:0007798,1.57e-25,78;UBERON:0004872,3.06e-24,83;UBERON:0007500,4.53e-23,59;UBERON:0001981,4.53e-23,59;UBERON:0004537,4.53e-23,59;UBERON:0006965,4.53e-23,59;UBERON:0001009,1.13e-21,112;UBERON:0004535,1.94e-19,109;UBERON:0000490,6.04e-15,148;UBERON:0005631,6.42e-13,14;UBERON:0000158,6.42e-13,14;UBERON:0001637,1.49e-12,42;UBERON:0003509,1.49e-12,42;UBERON:0004572,1.49e-12,42;UBERON:0004111,4.15e-12,240;UBERON:0003104,5.35e-12,160;UBERON:0009142,5.35e-12,160;UBERON:0000478,7.22e-12,24;UBERON:0005256,3.10e-11,122;UBERON:0000926,3.58e-11,315;UBERON:0004120,3.58e-11,315;UBERON:0006603,3.58e-11,315;UBERON:0000025,7.91e-11,192;UBERON:0003081,8.90e-11,203;UBERON:0004573,1.63e-10,33;UBERON:0004571,1.63e-10,33;UBERON:0004638,1.92e-10,18;UBERON:0001986,1.92e-10,18;UBERON:0004852,1.92e-10,18;UBERON:0000119,4.77e-10,309;UBERON:0003124,4.83e-10,7;UBERON:0000483,6.34e-10,306;UBERON:0000487,2.29e-09,22;UBERON:0006914,7.09e-09,25;UBERON:0007503,2.39e-08,78;UBERON:0006554,1.28e-07,47;UBERON:0000080,1.66e-07,9;UBERON:0002120,1.66e-07,9;UBERON:0004875,1.66e-07,9;UBERON:0005721,1.66e-07,9;UBERON:0005754,1.66e-07,9;UBERON:0007297,1.66e-07,9;UBERON:0000947,1.72e-07,21;UBERON:0010191,1.72e-07,21;UBERON:0001008,2.46e-07,48;UBERON:0010260,2.93e-07,9;UBERON:0000058,4.44e-07,19;UBERON:0003513,4.63e-07,7;UBERON:0002385,6.46e-07,64;UBERON:0001015,6.46e-07,64;UBERON:0000383,6.46e-07,64;UBERON:0005103,6.51e-07,8;UBERON:0000083,6.51e-07,8;UBERON:0009201,6.51e-07,8;UBERON:0006553,6.51e-07,8;UBERON:0003074,6.51e-07,8;UBERON:0003060,6.51e-07,8;UBERON:0002100,7.48e-07,199 | |||
|phase1_expression=0.908391896352783,0.856402095563933,0.281908808191942,1.0007329835313,1.34088328328186,4.36169262050184,17.7309914717817,0,0,0.491467873003018,2.79120467188971,6.334799791775,14.5071838025649,0,0.662794751455832,5.3786011716142,1.80808358407193,1.46062018077475,0.975865597581014,0.246242116153576,3.06001036866379,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0,0,0.50133791063589,0.144846518960824,0.795285947051099,0.973269740605272,0.661743720148475,9.53436409089025,6.58760892698445,0.196468613246569,0,0,0,0,2.6591592103773,0,0,0,0.596287222100115,0,1.38856200643038,1.69592382577203,3.77549492588915,8.80377734208216,0.835979866147242,1.8089173141853,0.71153252537342,1.33888245105868,2.01414658554573,3.04108842287405,2.92874469057803,2.20597848207521,7.29127753093584,2.85759130509055,1.79623498100936,2.25222960966644,0,2.84779697870439,1.64881569537367,0,0,0.436094052142534,0.993943903390637,1.2663051166458,0.397227542439656,1.43418310374407,1.06400514659507,3.36406560085384,0,7.89336154934912,0,0.269421344139376,0,0.302714855289863,0,0.234321431833797,0.936480230490962,0.570471821544449,0.597794722207204,0.117434498643765,0,0,0.816616685019573,0.491337269247072,0.413303124703062,0,0.494533858557114,0.910161361938026,4.31170885089743,0,0,0,0,1.22595118319608,1.35214253015937,0.567160915800105,0,0,0.423863802319124,0,0,0.257640540045629,0,0,0.194874010322397,1.00973509697646,0.0920498986422993,0,0,0,0.339121184620975,0,0.818238361772504,0,0,0,0,0.10366105501537,0,0,0,0,2.76269842704961,0.928735856063958,0,0.473227200159376,0.505754070234305,0,0.220587945464788,0.217879444092406,0.474541238222193,0.539325232640658,0.392442930250692,0.38474715694639,4.42893272774789,5.60967095213783,0,0,17.7457048750563,11.7939266001315,3.54473944008842,0,0.245976877086227,4.28919525746314,0.219500570817251,0,0,0.0925884451585296,0.325808305310325,0,17.3197610430328,0,1.76113041353732,3.3204282985047,5.55582615091933,7.61016608938393,0,0,0,0.234004265139238,0.891786973732369,0,0.839910640994298,0.992425680696705,0.268675568108545,0,0.766765358330422,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0.224262168690721,1.74384027533312,0.2933531432838,0.517086863031111,0,1.690605505112,4.5209479819428,4.16029747645464,0.257207374262142,0,0,3.43147184779554,8.13932408087165,3.29296134712308,0.325736184293735,4.26470338491055,10.2953743481346,0,0,0.199945982364114,0,0.502257091432126,2.10833939483032,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,5.00170521059677,0.271265023699736,4.15941723061614,15.1664640477587,1.26161932027148,1.52283839490527,0.902838299183157,0,2.0694614258501,1.32845119707087,0.553107505625109,0,0,0.686286847621712,0,0,0,3.03127571446259,21.6366071363646,32.0533710929461,0.744323423456331,0.920771839728375,1.40330047216537,0.128139149255701,0,0.321707842287215,1.48418066444991,0.925258162815933,1.77561725313127,0,1.03850885836724,0.813472649219715,0.362578348774867,2.6065841139427,0,1.37777337797528,1.0925470080403,3.54035920390445,0,0.462092022626489,1.56869953835371,1.46139224653261,0.633309773357254,6.8240030442538,3.2317804002538,1.51141141271498,7.71136263451447,0.541892875087706,1.50506932156456,0.764628819135115,0,1.34324852833307,0.438519753291869,0,0,0.656029291399411,0.325378394664303,1.44257416306811,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0.0852266274161009,0,0.165284915360978,0,0,0,9.29691098594571,2.51849877464512,1.3940745403212,0.616067160352178,0.532306030317022,0,1.8532421910392,0.715624433709956,0,0.632758849437452,0.571890581771475,0.767693373934002,2.1396949401696,0.636406495851874,0.78494864019923,2.15846949099978,4.66712950551293,1.7671860351853,0.404364963146632,20.6063417524911,1.26377536871694,0,3.1682753652067,2.11300293513511,1.36499911407986,1.1312434556297,0,0,17.9128523315129,6.57676327880644,0.578775534266688,3.27947376023316,0.405820753925408,3.40805847909725,3.94373843545138,1.00387946542836,2.06322986127554,1.426684205925,0.709522128141196,0,1.64647446479951,0,0.349934720244983,0,0,0,1.69458841398202,0.86101074534246,0,1.33029046061003,0.459446800413919,0,0,0,0,0,0.648473311192717,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,6.25099522974109,0.71623345421307,0,2.15012491469462,0,0.562677665642051,2.22617410045812,0,0,1.9924798825107,0,0,0,0,0,2.51631383212515,0.179021174675609,0,0.690503839458535,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0.254253650292766,0,0,0,0,0,0.844175070377856,0,0.110579259931225,0.591095237907095,0,0,0,1.46205491157214,0.683652335082007,0,0,0,7.97502899329799,2.1983422416447,13.3258694004659,0,0,0.166211681900156,0.225595660617181,0,0.167821586975843,0,0.317873157960757,2.95397290339238,0.6529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| |||
|short_description=p@chr20:36757658..36757727,- | |||
}} |
Revision as of 11:10, 21 January 2014
Short description: | p@chr20:36757658..36757727, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:36757658..36757727, - |
Coexpression cluster: | C454_Placental_Amniotic_Smooth_Mesenchymal_Lens_Renal_bile |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 4.36e-17 | 36 |
mesodermal cell | 1.04e-14 | 121 |
meso-epithelial cell | 3.67e-14 | 45 |
endothelial cell of vascular tree | 3.93e-14 | 24 |
extraembryonic cell | 3.57e-12 | 19 |
smooth muscle cell | 8.98e-11 | 43 |
smooth muscle myoblast | 8.98e-11 | 43 |
blood vessel endothelial cell | 1.92e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.92e-10 | 18 |
lining cell | 2.80e-09 | 58 |
barrier cell | 2.80e-09 | 58 |
vascular associated smooth muscle cell | 6.01e-08 | 32 |
muscle cell | 1.26e-07 | 55 |
muscle precursor cell | 6.80e-07 | 58 |
myoblast | 6.80e-07 | 58 |
multi-potent skeletal muscle stem cell | 6.80e-07 | 58 |
glomerular endothelial cell | 8.28e-07 | 5 |