FFCP PHASE1:Hg19::chr3:64040860..64040865,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:64040860..64040865,+ | |||
|id=chr3:64040860..64040865,+ | |||
|ontology_enrichment_celltype=CL:0000133!1.48e-08!59;CL:0000333!1.30e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0000346;1.71e-14;3!CL:1000428;1.71e-14;3!CL:0002559;3.10e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,1.60e-14,3;CL:1000428,1.60e-14,3;CL:0002559,2.97e-09,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!3.51e-10!2;DOID:14566!2.78e-09!239;DOID:162!8.59e-09!235;DOID:0050687!5.88e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1909;1.91e-79;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.34e-79,2 | |||
|ontology_enrichment_uberon=UBERON:0000060!4.41e-12!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;1.65e-24;15!UBERON:0007376;1.65e-24;15!UBERON:0000412;1.71e-14;3!UBERON:0001992;1.71e-14;3!UBERON:0010371;4.50e-12;31!UBERON:0001052;3.26e-11;4!UBERON:0002073;3.10e-09;5!UBERON:0004907;3.10e-09;5!UBERON:0002097;4.09e-09;41!UBERON:0003102;2.74e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,1.65e-24,15;UBERON:0007376,1.65e-24,15;UBERON:0007383,1.65e-24,15;UBERON:0000412,1.60e-14,3;UBERON:0001992,1.60e-14,3;UBERON:0001052,2.80e-11,4;UBERON:0002097,1.60e-09,41;UBERON:0004907,2.74e-09,5;UBERON:0002073,2.97e-09,5;UBERON:0005086,2.97e-09,5;UBERON:0002199,1.43e-08,46;UBERON:0002416,1.43e-08,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,1.09493207722749,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0.424059214301822,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0.160753148465019,0.412618309791701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,2.88133323329131,1.14186133417987,0.235265819698172,0,0.579684114443301,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.351742488719241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40136081656895,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0.111855431797792,0,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0.630832124175395,0.218531143927391,0,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0.448527450322454,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:64040860..64040865,+ | |||
}} |
Revision as of 19:36, 21 January 2014
Short description: | p@chr3:64040860..64040865, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:64040860..64040865, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 1.60e-14 | 3 |
stem cell of epidermis | 1.60e-14 | 3 |
hair follicle cell | 2.97e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 1.65e-24 | 15 |
outer epithelium | 1.65e-24 | 15 |
enveloping layer of ectoderm | 1.65e-24 | 15 |
dermal papilla | 1.60e-14 | 3 |
papillary layer of dermis | 1.60e-14 | 3 |
rectum | 2.80e-11 | 4 |
skin of body | 1.60e-09 | 41 |
lower digestive tract | 2.74e-09 | 5 |
hair follicle | 2.97e-09 | 5 |
hair follicle placode | 2.97e-09 | 5 |
integument | 1.43e-08 | 46 |
integumental system | 1.43e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.34e-79 | 2 |