FFCP PHASE1:Hg19::chr3:121797278..121797287,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_at_chr3:121797278..121797287,- | |||
|id=chr3:121797278..121797287,- | |||
|ontology_enrichment_celltype=CL:0000945!2.81e-44!24;CL:0000826!2.81e-44!24;CL:0000542!2.83e-34!53;CL:0000051!2.83e-34!53;CL:0000838!1.13e-30!52;CL:0000785!2.56e-16!2;CL:0000955!2.56e-16!2;CL:0000818!2.56e-16!2;CL:0000954!2.56e-16!2;CL:0000816!2.56e-16!2;CL:0002087!1.68e-13!119;CL:0000988!2.30e-13!182;CL:0002031!7.17e-13!124;CL:0000738!1.13e-12!140;CL:0000080!1.45e-12!6;CL:0000817!3.42e-11!3;CL:0002032!2.74e-10!165;CL:0000837!2.74e-10!165;CL:0000037!9.58e-10!172;CL:0000566!9.58e-10!172;CL:0000946!3.88e-09!1;CL:0000786!3.88e-09!1;CL:0000980!3.88e-09!1;CL:0000819!6.72e-09!1 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.01e-17;24!CL:0000542;7.16e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.43e-17,24;CL:0000826,4.43e-17,24;CL:0000838,3.24e-12,52;CL:0000542,5.45e-12,53;CL:0000051,5.45e-12,53;CL:0000988,6.97e-09,177 | |||
|ontology_enrichment_development_v019=CL:0000051;7.16e-07;53 | |||
|ontology_enrichment_disease=DOID:0060058!1.93e-47!10;DOID:2531!2.81e-13!51;DOID:0060083!2.81e-13!51;DOID:630!2.22e-09!1;DOID:0050177!2.22e-09!1;DOID:0050427!2.22e-09!1;DOID:0060060!2.60e-09!1;DOID:0060061!2.60e-09!1;DOID:8691!2.60e-09!1;DOID:2355!5.31e-09!1;DOID:0060073!6.72e-09!1;DOID:8675!6.72e-09!1;DOID:12603!8.49e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:630;8.64e-26;1!DOID:0050177;8.64e-26;1!DOID:0060060;8.64e-26;1!DOID:0060061;8.64e-26;1!DOID:0050427;8.64e-26;1!DOID:8691;8.64e-26;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,5.93e-26,1;DOID:0050177,5.93e-26,1;DOID:0050427,5.93e-26,1;DOID:0060060,9.79e-26,1;DOID:0060061,9.79e-26,1;DOID:8691,9.79e-26,1 | |||
|ontology_enrichment_uberon=UBERON:0002372!9.91e-09!1;UBERON:0001961!9.91e-09!1;UBERON:0001744!9.91e-09!1;UBERON:0001735!9.91e-09!1;UBERON:0000178!1.24e-08!15;UBERON:0000179!1.24e-08!15;UBERON:0000463!1.24e-08!15;UBERON:0002331!9.97e-08!10;UBERON:0000358!9.97e-08!10;UBERON:0000307!9.97e-08!10;UBERON:0000091!9.97e-08!10;UBERON:0000087!9.97e-08!10;UBERON:0007806!9.97e-08!10;UBERON:0008780!9.97e-08!10;UBERON:0005728!9.97e-08!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;7.19e-23;10!UBERON:0000178;1.63e-15;15!UBERON:0000179;1.63e-15;15!UBERON:0000463;1.63e-15;15!UBERON:0000478;5.83e-10;24!UBERON:0002390;1.05e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,8.66e-23,10;UBERON:0000358,8.66e-23,10;UBERON:0000307,8.66e-23,10;UBERON:0000091,8.66e-23,10;UBERON:0000087,8.66e-23,10;UBERON:0007010,8.66e-23,10;UBERON:0007806,8.66e-23,10;UBERON:0008780,8.66e-23,10;UBERON:0005728,8.66e-23,10;UBERON:0000178,1.85e-15,15;UBERON:0000179,1.85e-15,15;UBERON:0000463,1.85e-15,15;UBERON:0000478,6.29e-10,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90370941842215,2.79142004129816,2.83358812729245,0,0,0,0,0,0,0.232401601740905,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48260564340311,2.10058696209055,1.67075119208729,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988058159489721,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59989916683944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576169937778896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799529247399431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,1.9234109538194 | |||
|short_description=p@chr3:121797278..121797287,- | |||
}} |
Revision as of 20:55, 21 January 2014
Short description: | p@chr3:121797278..121797287, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:121797278..121797287, - |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.43e-17 | 24 |
pro-B cell | 4.43e-17 | 24 |
lymphoid lineage restricted progenitor cell | 3.24e-12 | 52 |
lymphocyte | 5.45e-12 | 53 |
common lymphoid progenitor | 5.45e-12 | 53 |
hematopoietic cell | 6.97e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 8.66e-23 | 10 |
blastocyst | 8.66e-23 | 10 |
blastula | 8.66e-23 | 10 |
bilaminar disc | 8.66e-23 | 10 |
inner cell mass | 8.66e-23 | 10 |
cleaving embryo | 8.66e-23 | 10 |
connecting stalk | 8.66e-23 | 10 |
inner cell mass derived epiblast | 8.66e-23 | 10 |
extraembryonic mesoderm | 8.66e-23 | 10 |
blood | 1.85e-15 | 15 |
haemolymphatic fluid | 1.85e-15 | 15 |
organism substance | 1.85e-15 | 15 |
extraembryonic structure | 6.29e-10 | 24 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 5.93e-26 | 1 |
monogenic disease | 5.93e-26 | 1 |
xeroderma pigmentosum | 5.93e-26 | 1 |
non-Hodgkin lymphoma | 9.79e-26 | 1 |
cutaneous T cell lymphoma | 9.79e-26 | 1 |
mycosis fungoides | 9.79e-26 | 1 |