FFCP PHASE1:Hg19::chr3:147072976..147072980,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1079 | |||
|description=CAGE_peak_at_chr3:147072976..147072980,- | |||
|id=chr3:147072976..147072980,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000214;8.31e-09;3!CL:0002590;1.04e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,8.31e-09,3;CL:0002590,1.04e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.47e-30;3!UBERON:0005425;4.10e-23;1!UBERON:0003056;1.30e-08;3!UBERON:0005062;9.10e-07;4!UBERON:0007284;9.10e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;9.10e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,8.14e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0003076!1.50e-33!15;UBERON:0003057!1.50e-33!15;UBERON:0004732!5.19e-33!13;UBERON:0001049!1.56e-32!57;UBERON:0005068!1.56e-32!57;UBERON:0006241!1.56e-32!57;UBERON:0007135!1.56e-32!57;UBERON:0004733!1.76e-29!12;UBERON:0002028!1.76e-29!12;UBERON:0007277!1.76e-29!12;UBERON:0002616!1.36e-28!59;UBERON:0001017!7.16e-27!82;UBERON:0000073!2.28e-26!94;UBERON:0001016!2.28e-26!94;UBERON:0003075!1.09e-25!86;UBERON:0007284!1.09e-25!86;UBERON:0005743!2.51e-25!86;UBERON:0002346!3.00e-24!90;UBERON:0000955!3.24e-23!69;UBERON:0006238!3.24e-23!69;UBERON:0002298!1.15e-21!8;UBERON:0002680!9.84e-20!9;UBERON:0001895!9.84e-20!9;UBERON:0010092!9.84e-20!9;UBERON:0004121!6.84e-14!169;UBERON:0000924!2.11e-13!173;UBERON:0006601!2.11e-13!173;UBERON:0007023!2.19e-13!115;UBERON:0001896!7.54e-12!3;UBERON:0005290!7.54e-12!3;UBERON:0010096!7.54e-12!3;UBERON:0006331!7.82e-12!3;UBERON:0002020!8.49e-12!34;UBERON:0003528!8.49e-12!34;UBERON:0001893!1.06e-11!34;UBERON:0000988!2.89e-11!3;UBERON:0002780!3.92e-11!41;UBERON:0001890!3.92e-11!41;UBERON:0006240!3.92e-11!41;UBERON:0003080!8.24e-11!42;UBERON:0002037!8.76e-11!6;UBERON:0006215!8.76e-11!6;UBERON:0000033!1.17e-10!123;UBERON:0002791!3.76e-10!33;UBERON:0000153!6.50e-10!129;UBERON:0007811!6.50e-10!129;UBERON:0002308!8.14e-10!9;UBERON:0000125!8.14e-10!9;UBERON:0000025!1.82e-09!194;UBERON:0000200!2.86e-09!6;UBERON:0002360!1.15e-08!2;UBERON:0005162!1.15e-08!2;UBERON:0000122!1.15e-08!2;UBERON:0000094!1.15e-08!2;UBERON:0007645!1.15e-08!2;UBERON:0000119!1.22e-08!312;UBERON:0001869!1.90e-08!32;UBERON:0002148!2.81e-08!2;UBERON:0009662!2.81e-08!2;UBERON:0000483!1.78e-07!309;UBERON:0001950!4.17e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0004732;1.84e-27;13!UBERON:0002134;4.10e-23;1!UBERON:0000941;4.10e-23;1!UBERON:0001785;4.10e-23;1!UBERON:0002464;4.10e-23;1!UBERON:0004904;4.10e-23;1!UBERON:0001021;4.10e-23;1!UBERON:0005208;4.10e-23;1!UBERON:0004145;4.10e-23;1!UBERON:0005946;4.10e-23;1!UBERON:0005965;4.10e-23;1!UBERON:0002078;4.10e-23;1!UBERON:0004733;2.91e-17;12!UBERON:0002028;2.91e-17;12!UBERON:0002037;7.79e-16;6!UBERON:0003714;2.90e-12;2!UBERON:0005162;2.90e-12;2!UBERON:0000122;2.90e-12;2!UBERON:0002081;2.90e-12;2!UBERON:0002133;2.90e-12;2!UBERON:0002680;6.87e-11;9!UBERON:0001895;6.87e-11;9!UBERON:0006915;8.31e-09;3!UBERON:0007616;8.31e-09;3!UBERON:0002217;8.31e-09;3!UBERON:0002018;8.31e-09;3!UBERON:0001896;1.30e-08;3!UBERON:0003978;1.30e-08;3!UBERON:0004151;1.30e-08;3!UBERON:0000946;1.30e-08;3!UBERON:0005290;1.30e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004732,1.97e-27,13;UBERON:0002134,3.28e-23,1;UBERON:0005208,3.28e-23,1;UBERON:0005946,3.28e-23,1;UBERON:0005965,3.28e-23,1;UBERON:0002078,3.28e-23,1;UBERON:0000941,4.10e-23,1;UBERON:0001785,4.10e-23,1;UBERON:0002464,4.10e-23,1;UBERON:0004904,4.10e-23,1;UBERON:0001021,4.10e-23,1;UBERON:0003902,4.10e-23,1;UBERON:0005425,4.10e-23,1;UBERON:0004733,3.08e-17,12;UBERON:0002028,3.08e-17,12;UBERON:0007277,3.08e-17,12;UBERON:0002037,7.79e-16,6;UBERON:0006215,7.79e-16,6;UBERON:0003076,6.16e-14,15;UBERON:0003057,6.16e-14,15;UBERON:0002081,2.59e-12,2;UBERON:0002133,2.59e-12,2;UBERON:0010227,2.59e-12,2;UBERON:0003714,2.90e-12,2;UBERON:0005162,2.90e-12,2;UBERON:0000122,2.90e-12,2;UBERON:0002680,6.87e-11,9;UBERON:0001895,6.87e-11,9;UBERON:0010092,6.87e-11,9;UBERON:0006915,8.31e-09,3;UBERON:0007616,8.31e-09,3;UBERON:0002217,8.31e-09,3;UBERON:0002018,8.31e-09,3;UBERON:0003978,1.21e-08,3;UBERON:0009751,1.21e-08,3;UBERON:0004151,1.21e-08,3;UBERON:0000946,1.21e-08,3;UBERON:0002523,1.21e-08,3;UBERON:0005983,1.21e-08,3;UBERON:0004145,1.21e-08,3;UBERON:0002165,1.21e-08,3;UBERON:0002062,1.21e-08,3;UBERON:0007280,1.21e-08,3;UBERON:0001896,1.40e-08,3;UBERON:0005290,1.40e-08,3;UBERON:0010096,1.40e-08,3;UBERON:0003075,8.61e-07,82;UBERON:0007284,8.61e-07,82;UBERON:0001781,9.11e-07,4 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,2.232950216158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,3.42795705786796,3.25102380848902,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0.202203398942031,0,0,0,0,0,0,0,0,0.505492637027904,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,1.43574604915363,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,1.22021956690538,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0.255640214277473,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78380136166353,0,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.430018749454354,8.04634967185241,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:147072976..147072980,- | |||
}} |
Revision as of 21:49, 21 January 2014
Short description: | p@chr3:147072976..147072980, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:147072976..147072980, - |
Coexpression cluster: | C1079_synovial_cerebellum_small_Smooth_medulla_spinal_dura |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 8.31e-09 | 3 |
smooth muscle cell of the brain vasculature | 1.04e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 8.14e-07 | 4 |