FFCP PHASE1:Hg19::chr3:159482240..159482320,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29970 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=15678 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=8bp_to_DQ891190,DQ894374_5end | |||
|description=CAGE_peak_2_at_SCHIP1_5end | |||
|id=chr3:159482240..159482320,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.44e-10!180;CL:0000057!1.20e-09!75;CL:0000222!9.76e-08!119;CL:0000220!9.58e-07!246 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.71e-10,76;CL:0000222,1.31e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!6.96e-23!365;UBERON:0000477!1.93e-21!286;UBERON:0004111!1.14e-20!241;UBERON:0000467!1.67e-20!625;UBERON:0000480!4.02e-20!626;UBERON:0000119!3.05e-19!312;UBERON:0000468!3.19e-19!659;UBERON:0000025!4.48e-19!194;UBERON:0000483!6.77e-19!309;UBERON:0001049!1.69e-16!57;UBERON:0005068!1.69e-16!57;UBERON:0006241!1.69e-16!57;UBERON:0007135!1.69e-16!57;UBERON:0003075!9.18e-16!86;UBERON:0007284!9.18e-16!86;UBERON:0000033!4.61e-15!123;UBERON:0000481!4.82e-15!347;UBERON:0002616!8.00e-15!59;UBERON:0004121!4.81e-14!169;UBERON:0000955!2.37e-13!69;UBERON:0006238!2.37e-13!69;UBERON:0000064!2.75e-13!219;UBERON:0002346!3.88e-13!90;UBERON:0000062!4.32e-13!511;UBERON:0005743!5.76e-13!86;UBERON:0001017!6.24e-13!82;UBERON:0002780!1.03e-12!41;UBERON:0001890!1.03e-12!41;UBERON:0006240!1.03e-12!41;UBERON:0000153!1.17e-12!129;UBERON:0007811!1.17e-12!129;UBERON:0003080!1.34e-12!42;UBERON:0000924!2.55e-12!173;UBERON:0006601!2.55e-12!173;UBERON:0002020!5.82e-12!34;UBERON:0003528!5.82e-12!34;UBERON:0001893!7.38e-12!34;UBERON:0000073!1.86e-11!94;UBERON:0001016!1.86e-11!94;UBERON:0002791!2.19e-11!33;UBERON:0000923!4.14e-11!604;UBERON:0005291!4.14e-11!604;UBERON:0006598!4.14e-11!604;UBERON:0002532!4.14e-11!604;UBERON:0003056!4.53e-11!61;UBERON:0002050!4.57e-11!605;UBERON:0005423!4.57e-11!605;UBERON:0001869!1.22e-10!32;UBERON:0007023!2.30e-10!115;UBERON:0000922!4.18e-10!612;UBERON:0002049!1.77e-09!79;UBERON:0007798!1.77e-09!79;UBERON:0004872!2.00e-09!84;UBERON:0001981!1.36e-08!60;UBERON:0007500!1.36e-08!60;UBERON:0004537!1.36e-08!60;UBERON:0006965!1.36e-08!60;UBERON:0002619!2.16e-08!22;UBERON:0000055!5.19e-08!69;UBERON:0000956!6.99e-08!25;UBERON:0000203!6.99e-08!25;UBERON:0001950!1.07e-07!20;UBERON:0003914!1.62e-07!118;UBERON:0001637!4.85e-07!42;UBERON:0003509!4.85e-07!42;UBERON:0004572!4.85e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.13e-10;34!UBERON:0003528;2.48e-10;34!UBERON:0002020;2.48e-10;34!UBERON:0002791;5.95e-10;32!UBERON:0001869;6.86e-10;32!UBERON:0002780;9.13e-10;41!UBERON:0001890;9.13e-10;41!UBERON:0000073;3.51e-09;53!UBERON:0002616;3.51e-09;53!UBERON:0002619;1.34e-08;22!UBERON:0000956;4.82e-08;25!UBERON:0000203;4.82e-08;25!UBERON:0001950;6.65e-08;20!UBERON:0000955;8.62e-07;68!UBERON:0001017;8.84e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,1.37e-20,240;UBERON:0010314,8.34e-20,132;UBERON:0000119,1.34e-19,309;UBERON:0000025,2.76e-19,192;UBERON:0000483,3.00e-19,306;UBERON:0003075,3.72e-17,82;UBERON:0007284,3.72e-17,82;UBERON:0001049,6.54e-17,56;UBERON:0005068,6.54e-17,56;UBERON:0006241,6.54e-17,56;UBERON:0007135,6.54e-17,56;UBERON:0010371,3.08e-15,104;UBERON:0000073,3.33e-15,53;UBERON:0002616,3.33e-15,53;UBERON:0002346,1.56e-14,86;UBERON:0000955,1.31e-13,68;UBERON:0006238,1.31e-13,68;UBERON:0002780,5.88e-13,41;UBERON:0001890,5.88e-13,41;UBERON:0003080,5.88e-13,41;UBERON:0006240,5.88e-13,41;UBERON:0001017,7.51e-13,81;UBERON:0004121,3.05e-12,171;UBERON:0000924,3.05e-12,171;UBERON:0006601,3.05e-12,171;UBERON:0003528,3.36e-12,34;UBERON:0002020,3.36e-12,34;UBERON:0001893,4.28e-12,34;UBERON:0003056,6.52e-12,61;UBERON:0001016,2.93e-11,89;UBERON:0002791,5.36e-11,32;UBERON:0001869,7.43e-11,32;UBERON:0007023,3.11e-10,114;UBERON:0005423,1.73e-09,581;UBERON:0004872,4.54e-09,83;UBERON:0002049,4.60e-09,78;UBERON:0007798,4.60e-09,78;UBERON:0002050,1.20e-08,564;UBERON:0002619,1.40e-08,22;UBERON:0000922,3.27e-08,592;UBERON:0007500,3.87e-08,59;UBERON:0001981,3.87e-08,59;UBERON:0004537,3.87e-08,59;UBERON:0006965,3.87e-08,59;UBERON:0000956,4.71e-08,25;UBERON:0000203,4.71e-08,25;UBERON:0000923,4.72e-08,560;UBERON:0010316,4.72e-08,560;UBERON:0005291,4.72e-08,560;UBERON:0006598,4.72e-08,560;UBERON:0010317,4.72e-08,560;UBERON:0002532,4.72e-08,560;UBERON:0001950,7.15e-08,20;UBERON:0000055,1.22e-07,68;UBERON:0003914,1.26e-07,117;UBERON:0004923,3.00e-07,66;UBERON:0011216,3.14e-07,223;UBERON:0001637,4.02e-07,42;UBERON:0003509,4.02e-07,42;UBERON:0004572,4.02e-07,42 | |||
|phase1_expression=10.1739892391512,6.85121676451146,11.9811243481575,16.0117277365009,4.46961094427288,12.2127393374052,10.1319951267324,1.89515962028049,0.261185628199839,4.17747692052565,0.697801167972428,9.82986174585775,9.49561121622433,4.20805600064159,3.97676850873499,8.0679017574213,6.02694528023977,11.684961446198,9.75865597581014,2.70866327768933,3.4680117511523,2.82109249330279,2.57612388417951,4.51685602740518,7.90918629447258,0,0,0,1.18009283054671,0.767658796194425,1.54816123316076,2.75826367343678,2.10844143144775,2.58827807116751,0,0,0,3.87796785972314,0.601633342410425,1.08505435357926,0,0,0,0.145398238779565,0,0,0.464858073811369,0,0.309706370895104,0.28769239232215,0,0.47296445977717,1.03423704220986,1.29096936716765,0,0.188242339542605,0.545812300115692,0,0.612167784741805,1.28371610830437,1.27867425159808,0.659702600373432,0.598390972864896,0,0,0.56738522469114,1.24564449799115,0.251248665256743,1.0429658368404,0.434377689410233,0.605399502633369,0,0.632924774881769,0.211255286311942,0.850417199860174,0.419317291016752,1.90958672949042,0.600707571366025,0.32145117339416,0.570025487482497,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,6.60856642895129,2.24203425192614,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1903433156981,1.34140171940727,6.64885321586358,3.97583067623023,7.01873074890245,19.2645870217896,18.2915767821753,25.7916481260397,8.79173799625831,9.75609348835281,9.39832206916449,7.33482822787191,1.82147644146271,1.48313777113772,0.324547393654683,0.174129737299267,0,0,0,0.371457501329565,5.16782259153433,5.16140757063675,4.51282652089873,10.1755429546322,4.61449379830897,4.40188867104108,4.59788926380983,7.75250277507987,6.40379272836078,14.0582657361161,7.25092770796465,4.56163263431108,8.54217201418593,4.77962004449629,6.48113558305408,5.71518261018111,6.28682243353275,4.39184773884957,4.5994991239765,8.54339093611316,6.04565754970344,0,0,1.74437620857014,14.4121865991642,10.7635934914893,21.3178781109282,10.8997915884549,6.38403087957043,10.0921968025615,8.5399196583764,13.3200476145266,4.66816553099649,2.69421344139376,2.94231425604226,3.93529311876822,2.88087962239999,1.64025002283658,3.74592092196385,3.99330275081114,4.93180645820944,2.81842796745036,5.01806127541208,4.07307339436521,5.71631679513701,3.56219520204127,2.89312187292143,8.31602000097437,9.39614331258516,10.0117749813183,3.59309070908119,2.02003336744879,3.25308151667107,7.75779523355712,5.70670907145089,12.8724874235588,9.76547382892879,7.94025282120147,23.8588215466186,11.9592137738398,12.7159140695737,14.4043726120513,12.1601984501358,27.825178324928,10.0503102419058,24.6413445072249,15.7847948361142,23.4763410047026,12.1505866207835,7.27407255684654,26.9807290312627,10.2767140192193,8.64759020783487,8.11695583285847,9.00062197949754,7.7437240755031,0.609868530647977,0.927708378250397,1.04574548582567,1.24393266018445,0.252320850875628,0.36497735907583,6.25798129319264,6.43240938192885,11.0507937081984,2.3218396401599,2.88751792667834,5.20549920175313,6.91197229320217,9.64044119533928,5.73528658208448,6.75426276686459,5.21995362044413,6.0674088672074,6.08286541888573,6.15595451114225,0.738155454624648,2.80483547606892,4.5273141246454,2.94017422771084,2.53510069643662,2.94848165003288,6.49868897349544,0,2.7057456479485,7.89211927373218,4.06076056011915,3.37205259772859,1.80952150340936,4.16648003213383,3.58389135841357,9.35941306751621,4.3299402607582,2.43453850447661,14.2064520025344,3.3204282985047,1.85194205030644,1.90254152234598,0,0,0,0,0,13.1227367581488,15.7903200506928,8.08118054281603,7.43335738433641,2.3250715081117,3.06706143332169,0,0,0.414656231081544,0,0.50496973370552,0.380987365753014,1.14596527667483,2.34434894420094,1.71072446022705,1.64523988325318,0.600686115687835,0.285826432630578,7.62491373548453,3.92364061949952,8.28722629776735,23.9152674151889,0,8.45302752556,14.6265964121679,8.32059495290929,3.34369586540785,1.41849132023278,3.72991050622539,7.14889968290738,0,0.823240336780769,4.23457039581856,5.33087923113819,1.58390374586686,7.23454504943007,17.4306691720059,12.7965428713033,0,0,2.10833939483032,16.054865317936,2.29723871668228,4.27910715122155,8.97644101338991,5.34238438630997,7.52056045607561,0,0,0,0.128343036279748,4.57370323600434,5.20559415430487,6.18631050222156,3.01529277601828,1.27587750330633,0,0,0,2.20844685094452,3.50119364741774,3.52644530809656,15.8057854763413,17.1291829245275,15.6125390883595,9.83987885938791,3.00946099727719,0,3.10419213877515,7.97070718242524,12.9058417979192,7.64575807319129,0.783204629850962,1.02943027143257,0.413536052245775,0.431428401637234,0.533637789017222,4.54691357169389,18.3078983461547,2.41912234663744,22.3297027036899,19.4896706075839,15.7169652882521,19.7334289853779,19.4448754645347,23.4846724869667,7.42090332224955,7.09364591492216,9.05564799096948,6.57017248110473,5.71179872101983,6.8564123291376,2.41718899183244,9.62431057455767,3.22283461275637,7.23331023437022,6.19109971222838,6.94959399284948,1.35359883872224,4.23584354074281,2.35304930753057,10.2297457257282,4.11651352682215,4.54933536283586,4.59253004246592,5.18198198645135,4.62681758070868,4.6060894382455,2.50844886927427,5.86215428003588,8.31076008928724,6.04461837749881,0,0,3.84675187674584,6.88830755969382,9.43597344526479,4.6368455241475,6.22672360764735,6.1882124940441,2.87132768998086,8.45078319847478,8.03419649220798,1.7400729292582,4.62145851343933,4.1445992176055,3.58375088459779,3.86712881525785,5.075584286998,6.30677042879147,4.71869788927708,7.10725136052206,8.64855303142978,14.420236511888,5.36136238534415,7.90237433805386,14.4813679542094,8.3644472419272,7.08477234405004,8.51689648507235,7.82939692867565,6.11569923042936,15.743737541619,5.58237554039501,10.440521015718,10.2940304718865,7.16513815671735,2.56763392820352,6.68226820644467,3.92474320099615,10.7923474549989,5.4907405947211,4.3590588867904,6.87420437349274,7.92551605865041,7.16139375606268,2.92580243453754,6.09283724078211,10.5650146756755,3.8219975194236,5.37340641424108,5.65040583101214,7.16774946609961,7.96126770289464,7.89211593456773,2.89387767133344,2.62357900818653,10.7542499790233,8.0554109505935,6.47899885824155,4.87598597493775,13.1653714957582,14.26684205925,2.48332744849418,6.96655196482292,4.93942339439853,3.41525856389144,5.59895552391973,4.13755084719702,7.37332503089366,7.62236894029258,3.67160823029439,4.73555909938353,5.05414427002877,3.10401107475673,5.51336160496703,0,0,0,0,0,0,0,0,5.44802762750113,16.3621575394771,8.33136734335508,0,0,0.0711418433484141,0.159426272728822,0,0,0,0,0.842391534340376,0,0,2.50634477090067,0,0,0,0,0,0,0.223676107892416,0,0.586164286206121,0,0,0,0,0,0,7.03239260505091,0,1.89453753271713,6.25099522974109,20.5320256874413,12.4725165949708,7.06469614828234,13.9180670687282,13.7856028082302,6.67852230137435,0.329607748453519,1.26675244876796,18.9285588838516,6.90709788827869,0,3.06806047506464,0,24.5721274252828,3.59473404589307,3.22238114416096,0,18.3476734484697,0,16.6705485216955,19.3866549219044,20.3162134974454,3.99227596002388,0.520855522170466,2.53633999988968,5.07499702804355,3.75518379342149,9.15313141053959,6.61885508950222,0.689486746482929,0,1.56262495439963,14.1718621730214,8.32115426515315,4.5774520895125,4.86548743697388,9.45752380651352,14.4794362121622,1.74301541630384,40.8511570736308,5.1556673197544,4.10191401049204,2.76676685265672,4.93667044253747,2.60753692612819,10.5270382711533,9.52614971379368,11.72676507241,0,0.470940769185074,0,0,0,0,0,0,1.89898258075224,11.5895293792995,1.97894300007517,2.16388639742091,1.99052386215701,5.30745387020035,4.888241159469,1.48260564340311,1.72989514525104,1.35748534357092,54.1231097834837,4.81546588379273,43.1046580134624,0,4.69595085437015,3.3989253134773,1.97292201424695,0,6.73360075587078,2.46427660551103,1.65355761355942,6.42866786662932,1.32930774541437,1.65495977937749,4.08112793929393,3.58417289318877,7.39984819677461,2.63481878724963,5.90103110339445,9.89723213885214,4.61413794876134,6.98906672968121,3.95567874684718,2.80593360738347,2.63121541510268,3.12038736802195,6.59525312121252,0,1.80784592624426,4.38534158869603,2.78200456384186,18.2968200312489,2.73771935828724,6.81349972138037,9.39193176853151,6.99333633537456,1.29681375438695,8.70478130860959,0,0.14405479798815,3.97608113809384,3.53541051925193,5.02845562472372,5.33474516192899,6.22189127581563,3.17845648891671,28.8201738580699,39.702559878678,3.83239764200917,11.6036669183388,1.31443677139657,10.6127312483457,15.1245879847711,22.971936786458,7.98716001995964,11.5891032996874,19.4159167974429,8.93540184073459,20.8973932454594,0,0,0.0824158583811665,0,2.75596948241297,0.0846733320657845,9.54275627771164,15.9357985150543,1.60753148465019,0.687697182986169,0.83088067605837,10.348799011369,4.6428117273477,14.6406431545839,4.69608562638973,6.93490224232944,5.19300422536481,1.79520572082991,1.07572403599707,14.5855549962778,5.00286728461357,8.60719561475061,3.30549098951175,4.88699641578341,7.77799342081141,6.85833456229759,3.59190574687462,0,5.45241669713349,1.58636928128176,6.30174604815755,3.97520666736664,31.1571924831337,30.281265799076,2.22412889249628,6.34333520085005,4.91222097811396,3.45849471219265,2.07119527673598,0,0,0,42.7688642706022,17.9525875111926,14.7907037473393,13.1728598008288,18.6887399504589,8.95208348626335,11.5188863395708,11.5924951656865,18.1526849524425,16.6288666750121,25.9573980596234,33.6562503942298,0.276697269872462,3.12451019905266,4.09452617362449,1.99825733481477,4.23478475456709,3.27834434064817,5.21715702998971,7.76124975011745,9.81595901358343,10.5413113685497,9.28074725847937,8.30174075783498,16.9064132103342,5.26332157312924,12.8546285198753,10.2588552384635,7.68846779946096,7.48694805669401,5.39763734596325,11.0236699382144,10.7823614038622,11.1653520114358,17.739332101599,13.8237000277441,18.2786501841022,13.0198634625492,12.1838601665715,7.84097066410166,17.1692491155043,18.710506768835,8.80061082258938,10.3018711554838,11.1127331292753,11.3566408405786,2.69667762570225,14.7964698048699,7.04684588306071,21.9904747746904,5.32501690944818,6.85262772618109,6.62628712001503,8.95524196766819,12.0606227268289,9.01114644323993,7.33073345429476,5.06827321959218,2.56241518587947,6.21774615116157,11.8505382909179,19.3561810612423,0,0.398594520940089,0,3.93131818615695,6.63586853635042,2.11312123358627,8.79944541761692,0.853533837553127,0,9.08025525706937,3.49801305478497,2.79759015438889,1.24415452006595,2.17420431216208,0.646948868380091,0,2.07498312564826,0,0,0,0,18.1262479872449,0,4.80342448971282,4.58478726797889,6.7374005017704,19.2045383038414,14.1696576325585,24.1047127176298,26.6651273512981,4.03314713954749,19.0874016801241,20.6688826408769,94.2278173710419,10.2073627241067,1.76954585021611,12.4731446994742,17.4443755887011,17.1621942960225,9.66503896484141,3.38157577597667,4.81346101435246,4.0341013740704,0,5.76194727859129,17.6873670910904,4.43568258651136,17.1545464930722,12.4972495778216,14.6747625515841,23.2736023411638,3.82882366312754,0.548257766857182,11.9090682813431,0,9.83770692824884,29.9993028091841,3.69912094440706,1.21393120847326,1.59363533945908,8.6928322759386,0.115233987555779,9.2603525096206,31.7418653001804,20.6526508987346,4.60955979447476,6.00649570217173,10.8320468133709,7.07020154622009,2.80272163313789,0.913158720509496,7.34153810143313,0.9555033757741,3.4308741204795,0,0,0.869291361512897,12.0256704709538,6.63091725321718,6.828739083758,7.60385627995501,1.29068207646083,2.36664001461131,4.34588364271704,6.35080575286394,31.3876409905349,18.3021767541949,13.3775451456841,8.50101281663222,0,0.365753774946808,1.29485767437579,3.2852098193999,1.1598144313382,2.4285549652957,1.40363678077263,0.795803100645473,0.594600453887843,1.24240690242856,6.15666893774403,1.50962843566674,2.62392137567012,1.5299169235277,0.470317296361523,29.6629469322226,0.235676547101626,25.7164091920578,22.2784800245315,26.6273108377542,23.7897960562944,1.03382309777839,1.93373663920732,0,2.14264726326789,15.5273743554904,1.44434460040503,13.1460549884373,0.458729283404541,54.3257020144,5.67977623895465,18.2897108613561,3.49080552272302,2.1161073620616,7.06790534516827,4.15958065768276,12.1135437394661,0.378499274505237,0.764859003745869,3.04076402427449,0.713921808193872,3.20660886318673,3.12442658418473,0,2.19758224832894,0.803892390468535,26.5334220626809,50.2684359888811,1.91910583710883,1.90451545170992,0,0.620747142958579,8.85841714386846,0.827413057616144,2.42540626749863,3.26575121845442,3.42233301085281,0.80822463617505,4.01644350198988,1.33064142618405,4.31437323638165,8.32473297846181,9.653614114347,1.52702843581198,21.1176848163109,8.55690109280065,2.84827324821017,5.99181096766961,5.63566622054873,0 | |||
|short_description=p2@SCHIP1 | |||
}} |
Revision as of 22:20, 21 January 2014
Short description: | p2@SCHIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SCHIP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_DQ891190, DQ894374_5end |
EntrezGene: | SCHIP1 |
HGNC: | 15678 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.71e-10 | 76 |
mesodermal cell | 1.31e-07 | 121 |