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{{DOID
{{DOID
|id=DOID:3149
|alt_id=
|name=keratoacanthoma
|namespace=disease_ontology
|def=
|xref=MSH:D007636;;NCI:C3146;;SNOMEDCT_2010_1_31:156395005;;SNOMEDCT_2010_1_31:201061007;;SNOMEDCT_2010_1_31:201064004;;SNOMEDCT_2010_1_31:254662007;;SNOMEDCT_2010_1_31:267858008;;SNOMEDCT_2010_1_31:58220003;;UMLS_CUI:C0022572
|is_a=DOID:3151
|synonym="keratoacanthoma" EXACT [CSP2005:2020-2121];;"keratoacanthoma" EXACT [MTH:NOCODE];;"Keratoacanthoma (disorder)" EXACT [SNOMEDCT_2005_07_31:254662007];;"Keratoacanthoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:58220003]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=DOID:3149
|is_a=DOID:3151
|is_obsolete=
|located_in=
|located_in=
|name=keratoacanthoma
|namespace=disease_ontology
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|is_obsolete=
|subset=
|preceded_by=
|synonym="keratoacanthoma" EXACT [CSP2005:2020-2121];;"keratoacanthoma" EXACT [MTH:NOCODE];;"Keratoacanthoma (disorder)" EXACT [SNOMEDCT_2005_07_31:254662007];;"Keratoacanthoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:58220003]
|union_of=
|xref=MSH:D007636;;NCI:C3146;;SNOMEDCT_2010_1_31:156395005;;SNOMEDCT_2010_1_31:201061007;;SNOMEDCT_2010_1_31:201064004;;SNOMEDCT_2010_1_31:254662007;;SNOMEDCT_2010_1_31:267858008;;SNOMEDCT_2010_1_31:58220003;;UMLS_CUI:C0022572
}}
}}

Revision as of 10:34, 12 September 2014

Name:keratoacanthoma
Namespace:disease_ontology
Xrefs:
links:

MSH:D007636
NCI:C3146
SNOMEDCT_2010_1_31:156395005
SNOMEDCT_2010_1_31:201061007
SNOMEDCT_2010_1_31:201064004
SNOMEDCT_2010_1_31:254662007
SNOMEDCT_2010_1_31:267858008
SNOMEDCT_2010_1_31:58220003

UMLS_CUI:C0022572
Synonyms: "keratoacanthoma" EXACT [CSP2005:2020-2121]
"keratoacanthoma" EXACT [MTH:NOCODE]
"Keratoacanthoma (disorder)" EXACT [SNOMEDCT_2005_07_31:254662007]
"Keratoacanthoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:58220003]

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:3151(skin squamous cell carcinoma)



Children


is a:FF:10713-109I2 (),FF:10791-110H8 (keratoacanthoma cell line:HKA-1)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

Mouse (Mus musculus)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3149 (keratoacanthoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
2.55e-98FFCP PHASE2:Hg19::chr7:101448249..101448254,+#_6c00b1f35ddff4f8ddf32c9d282a7053p@chr7:101448249..101448254, +
2.55e-98FFCP PHASE1:Hg19::chr7:101448277..101448287,+#_6c00b1f35ddff4f8ddf32c9d282a7053p@chr7:101448277..101448287, +
2.55e-98FFCP PHASE1:Hg19::chr7:101448101..101448113,+#_6c00b1f35ddff4f8ddf32c9d282a7053p@chr7:101448101..101448113, +
2.55e-98FFCP PHASE2:Hg19::chr7:101448277..101448287,+#_6c00b1f35ddff4f8ddf32c9d282a7053p@chr7:101448277..101448287, +
2.55e-98FFCP PHASE1:Hg19::chr8:123875147..123875159,+#_6c00b1f35ddff4f8ddf32c9d282a7053p26@ZHX2
2.55e-98FFCP PHASE1:Hg19::chr1:153431372..153431378,-#_6c00b1f35ddff4f8ddf32c9d282a7053p4@S100A7
2.55e-98FFCP PHASE2:Hg19::chr7:101448101..101448113,+#_6c00b1f35ddff4f8ddf32c9d282a7053p@chr7:101448101..101448113, +
2.55e-98FFCP PHASE1:Hg19::chr7:101448176..101448184,+#_6c00b1f35ddff4f8ddf32c9d282a7053p@chr7:101448176..101448184, +
2.55e-98FFCP PHASE2:Hg19::chr8:123875147..123875159,+#_6c00b1f35ddff4f8ddf32c9d282a7053p26@ZHX2
2.55e-98FFCP PHASE2:Hg19::chr1:153431372..153431378,-#_6c00b1f35ddff4f8ddf32c9d282a7053p4@S100A7
2.55e-98FFCP PHASE2:Hg19::chr7:101448176..101448184,+#_6c00b1f35ddff4f8ddf32c9d282a7053p@chr7:101448176..101448184, +
2.55e-98FFCP PHASE1:Hg19::chr7:101448249..101448254,+#_6c00b1f35ddff4f8ddf32c9d282a7053p@chr7:101448249..101448254, +
1.23e-66FFCP PHASE1:Hg19::chr9:97563078..97563086,+#_3e1f1361e153c7e44c2d99526425cf19p@chr9:97563078..97563086, +
1.23e-66FFCP PHASE2:Hg19::chr9:97563078..97563086,+#_3e1f1361e153c7e44c2d99526425cf19p@chr9:97563078..97563086, +
1.23e-66FFCP PHASE1:Hg19::chr20:49047228..49047236,-#_3e1f1361e153c7e44c2d99526425cf19p@chr20:49047228..49047236, -
1.23e-66FFCP PHASE2:Hg19::chr20:49047228..49047236,-#_3e1f1361e153c7e44c2d99526425cf19p@chr20:49047228..49047236, -
2.39e-66FFCP PHASE2:Hg19::chr1:76127067..76127073,-#_c3467bed3d5fa422d2fe551f9b8a8110p@chr1:76127067..76127073, -
2.39e-66FFCP PHASE2:Hg19::chr18:61254400..61254410,+#_c3467bed3d5fa422d2fe551f9b8a8110p8@SERPINB13
2.39e-66FFCP PHASE2:Hg19::chr17:19648916..19648937,-#_c3467bed3d5fa422d2fe551f9b8a8110p10@ALDH3A1
2.39e-66FFCP PHASE1:Hg19::chr17:19648916..19648937,-#_c3467bed3d5fa422d2fe551f9b8a8110p10@ALDH3A1
2.39e-66FFCP PHASE1:Hg19::chr1:76127067..76127073,-#_c3467bed3d5fa422d2fe551f9b8a8110p@chr1:76127067..76127073, -
2.39e-66FFCP PHASE1:Hg19::chr18:61254400..61254410,+#_c3467bed3d5fa422d2fe551f9b8a8110p8@SERPINB13
4.66e-66FFCP PHASE1:Hg19::chr19:51517875..51517889,-#_1a5293df01e438d5f8302c9208e2f395p3@AK026045
4.66e-66FFCP PHASE1:Hg19::chr17:48072063..48072074,-#_1a5293df01e438d5f8302c9208e2f395p5@DLX3
4.66e-66FFCP PHASE1:Hg19::chr2:178179611..178179619,-#_1a5293df01e438d5f8302c9208e2f395p4@ENST00000443132
4.66e-66FFCP PHASE2:Hg19::chr19:51517875..51517889,-#_1a5293df01e438d5f8302c9208e2f395p3@AK026045
4.66e-66FFCP PHASE1:Hg19::chr1:18085798..18085805,+#_1a5293df01e438d5f8302c9208e2f395p@chr1:18085798..18085805, +
4.66e-66FFCP PHASE2:Hg19::chr2:178179611..178179619,-#_1a5293df01e438d5f8302c9208e2f395p4@ENST00000443132
4.66e-66FFCP PHASE2:Hg19::chr1:18085798..18085805,+#_1a5293df01e438d5f8302c9208e2f395p@chr1:18085798..18085805, +
4.66e-66FFCP PHASE1:Hg19::chr13:28542963..28542973,-#_1a5293df01e438d5f8302c9208e2f395p1@CU677005
4.66e-66FFCP PHASE2:Hg19::chr17:48072063..48072074,-#_1a5293df01e438d5f8302c9208e2f395p5@DLX3
4.66e-66FFCP PHASE1:Hg19::chr1:10980427..10980431,-#_1a5293df01e438d5f8302c9208e2f395p@chr1:10980427..10980431, -
4.66e-66FFCP PHASE1:Hg19::chr3:193809263..193809278,+#_1a5293df01e438d5f8302c9208e2f395p1@ENST00000457815
4.66e-66FFCP PHASE2:Hg19::chr1:10980427..10980431,-#_1a5293df01e438d5f8302c9208e2f395p@chr1:10980427..10980431, -
4.66e-66FFCP PHASE2:Hg19::chr13:28542963..28542973,-#_1a5293df01e438d5f8302c9208e2f395p1@CU677005
4.66e-66FFCP PHASE2:Hg19::chr3:193809263..193809278,+#_1a5293df01e438d5f8302c9208e2f395p1@ENST00000457815
1.46e-50FFCP PHASE2:Hg19::chr1:151826151..151826159,-#_c78fb2a2ca711420cc96fbf29d85b5afp3@THEM5
1.46e-50FFCP PHASE1:Hg19::chr16:55600644..55600645,+#_c78fb2a2ca711420cc96fbf29d85b5afp2@CAPNS2
1.46e-50FFCP PHASE2:Hg19::chr16:55600644..55600645,+#_c78fb2a2ca711420cc96fbf29d85b5afp2@CAPNS2
1.46e-50FFCP PHASE1:Hg19::chr5:1884077..1884085,+#_c78fb2a2ca711420cc96fbf29d85b5afp1@ENST00000506335
1.46e-50FFCP PHASE2:Hg19::chr5:1884077..1884085,+#_c78fb2a2ca711420cc96fbf29d85b5afp1@ENST00000506335
1.46e-50FFCP PHASE1:Hg19::chr1:151826151..151826159,-#_c78fb2a2ca711420cc96fbf29d85b5afp3@THEM5
2.42e-50FFCP PHASE1:Hg19::chr8:123875131..123875140,+#_e107efe2ee38b31fdcae6638a9c4cc14p25@ZHX2
2.42e-50FFCP PHASE1:Hg19::chr17:77774350..77774360,+#_e107efe2ee38b31fdcae6638a9c4cc14p@chr17:77774350..77774360, +
2.42e-50FFCP PHASE2:Hg19::chr8:123875131..123875140,+#_e107efe2ee38b31fdcae6638a9c4cc14p25@ZHX2
2.42e-50FFCP PHASE2:Hg19::chr17:77774350..77774360,+#_e107efe2ee38b31fdcae6638a9c4cc14p@chr17:77774350..77774360, +
2.42e-50FFCP PHASE1:Hg19::chr12:130647145..130647153,+#_e107efe2ee38b31fdcae6638a9c4cc14p3@FZD10
2.42e-50FFCP PHASE2:Hg19::chr12:130647145..130647153,+#_e107efe2ee38b31fdcae6638a9c4cc14p3@FZD10
2.42e-50FFCP PHASE1:Hg19::chr8:120233966..120233975,+#_e107efe2ee38b31fdcae6638a9c4cc14p@chr8:120233966..120233975, +
2.42e-50FFCP PHASE2:Hg19::chr8:120233966..120233975,+#_e107efe2ee38b31fdcae6638a9c4cc14p@chr8:120233966..120233975, +
2.42e-50FFCP PHASE1:Hg19::chr7:101448204..101448229,+#_e107efe2ee38b31fdcae6638a9c4cc14p@chr7:101448204..101448229, +
2.42e-50FFCP PHASE2:Hg19::chr7:101448204..101448229,+#_e107efe2ee38b31fdcae6638a9c4cc14p@chr7:101448204..101448229, +
2.42e-50FFCP PHASE1:Hg19::chr1:86921028..86921032,+#_e107efe2ee38b31fdcae6638a9c4cc14p@chr1:86921028..86921032, +
2.42e-50FFCP PHASE2:Hg19::chr1:86921028..86921032,+#_e107efe2ee38b31fdcae6638a9c4cc14p@chr1:86921028..86921032, +
3.99e-50FFCP PHASE1:Hg19::chr2:234526341..234526346,+#_0a1d2ebcd2d47acf99a22e339cd97c42p1@UGT1A8
3.99e-50FFCP PHASE2:Hg19::chr2:234526341..234526346,+#_0a1d2ebcd2d47acf99a22e339cd97c42p1@UGT1A8
6.58e-50FFCP PHASE2:Hg19::chr3:136885144..136885147,+#_81784b8a47f9528d6e4e0fd2af29bfb2p@chr3:136885144..136885147, +
6.58e-50FFCP PHASE1:Hg19::chr1:153430422..153430443,-#_81784b8a47f9528d6e4e0fd2af29bfb2p3@S100A7
6.58e-50FFCP PHASE2:Hg19::chr10:54259346..54259353,+#_81784b8a47f9528d6e4e0fd2af29bfb2p@chr10:54259346..54259353, +
6.58e-50FFCP PHASE1:Hg19::chr10:54259346..54259353,+#_81784b8a47f9528d6e4e0fd2af29bfb2p@chr10:54259346..54259353, +
6.58e-50FFCP PHASE2:Hg19::chr1:153430422..153430443,-#_81784b8a47f9528d6e4e0fd2af29bfb2p3@S100A7
6.58e-50FFCP PHASE1:Hg19::chr1:118570948..118570964,-#_81784b8a47f9528d6e4e0fd2af29bfb2p@chr1:118570948..118570964, -
6.58e-50FFCP PHASE1:Hg19::chr14:65406349..65406358,+#_81784b8a47f9528d6e4e0fd2af29bfb2p@chr14:65406349..65406358, +
6.58e-50FFCP PHASE2:Hg19::chr1:118570948..118570964,-#_81784b8a47f9528d6e4e0fd2af29bfb2p@chr1:118570948..118570964, -
6.58e-50FFCP PHASE1:Hg19::chr4:152117165..152117168,+#_81784b8a47f9528d6e4e0fd2af29bfb2p@chr4:152117165..152117168, +
6.58e-50FFCP PHASE2:Hg19::chr4:152117165..152117168,+#_81784b8a47f9528d6e4e0fd2af29bfb2p@chr4:152117165..152117168, +
6.58e-50FFCP PHASE2:Hg19::chr14:65406349..65406358,+#_81784b8a47f9528d6e4e0fd2af29bfb2p@chr14:65406349..65406358, +
6.58e-50FFCP PHASE2:Hg19::chr10:127591699..127591713,-#_81784b8a47f9528d6e4e0fd2af29bfb2p@chr10:127591699..127591713, -
6.58e-50FFCP PHASE1:Hg19::chr10:127591699..127591713,-#_81784b8a47f9528d6e4e0fd2af29bfb2p@chr10:127591699..127591713, -
6.58e-50FFCP PHASE1:Hg19::chr3:136885144..136885147,+#_81784b8a47f9528d6e4e0fd2af29bfb2p@chr3:136885144..136885147, +
6.62e-41FFCP PHASE2:Hg19::chr17:39674844..39674854,+#_7d8373673113b8c62847adea13b2df1cp@chr17:39674844..39674854, +
6.62e-41FFCP PHASE1:Hg19::chr17:39674844..39674854,+#_7d8373673113b8c62847adea13b2df1cp@chr17:39674844..39674854, +
6.62e-41FFCP PHASE1:Hg19::chr10:5567644..5567657,+#_7d8373673113b8c62847adea13b2df1cp@chr10:5567644..5567657, +
6.62e-41FFCP PHASE2:Hg19::chr10:5567644..5567657,+#_7d8373673113b8c62847adea13b2df1cp@chr10:5567644..5567657, +
6.62e-41FFCP PHASE1:Hg19::chr1:152572708..152572714,+#_7d8373673113b8c62847adea13b2df1cp1@LCE3C
6.62e-41FFCP PHASE2:Hg19::chr1:152572708..152572714,+#_7d8373673113b8c62847adea13b2df1cp1@LCE3C
9.91e-41FFCP PHASE2:Hg19::chr5:67829374..67829382,-#_1303e4c33822e94b67a85d46d133c910p1@ENST00000515199
9.91e-41FFCP PHASE2:Hg19::chr17:39675950..39675974,-#_1303e4c33822e94b67a85d46d133c910p@chr17:39675950..39675974, -
9.91e-41FFCP PHASE1:Hg19::chr8:123875175..123875188,+#_1303e4c33822e94b67a85d46d133c910p22@ZHX2
9.91e-41FFCP PHASE1:Hg19::chr3:141678730..141678768,-#_1303e4c33822e94b67a85d46d133c910p@chr3:141678730..141678768, -
9.91e-41FFCP PHASE2:Hg19::chr8:123875175..123875188,+#_1303e4c33822e94b67a85d46d133c910p22@ZHX2
9.91e-41FFCP PHASE2:Hg19::chr3:141678730..141678768,-#_1303e4c33822e94b67a85d46d133c910p@chr3:141678730..141678768, -
9.91e-41FFCP PHASE1:Hg19::chr17:39675950..39675974,-#_1303e4c33822e94b67a85d46d133c910p@chr17:39675950..39675974, -
9.91e-41FFCP PHASE1:Hg19::chr5:67829374..67829382,-#_1303e4c33822e94b67a85d46d133c910p1@ENST00000515199
1.48e-40FFCP PHASE2:Hg19::chr17:39767356..39767365,+#_609ad6d555c81e3a52687e040d1713f2p@chr17:39767356..39767365, +
1.48e-40FFCP PHASE2:Hg19::chr10:4951559..4951578,+#_609ad6d555c81e3a52687e040d1713f2p@chr10:4951559..4951578, +
1.48e-40FFCP PHASE1:Hg19::chr10:4951559..4951578,+#_609ad6d555c81e3a52687e040d1713f2p@chr10:4951559..4951578, +
1.48e-40FFCP PHASE1:Hg19::chr17:39767356..39767365,+#_609ad6d555c81e3a52687e040d1713f2p@chr17:39767356..39767365, +
2.21e-40FFCP PHASE1:Hg19::chr22:48134043..48134048,+#_570b136f8770ca79ecbdebf9cdcf8bc3p@chr22:48134043..48134048, +
2.21e-40FFCP PHASE2:Hg19::chr22:48134043..48134048,+#_570b136f8770ca79ecbdebf9cdcf8bc3p@chr22:48134043..48134048, +
2.21e-40FFCP PHASE1:Hg19::chr21:23573043..23573054,+#_570b136f8770ca79ecbdebf9cdcf8bc3p@chr21:23573043..23573054, +
2.21e-40FFCP PHASE2:Hg19::chr21:23573043..23573054,+#_570b136f8770ca79ecbdebf9cdcf8bc3p@chr21:23573043..23573054, +
3.3e-40FFCP PHASE1:Hg19::chr4:15937680..15937694,+#_ad301bbc4362deae027897bd145c3237p@chr4:15937680..15937694, +
3.3e-40FFCP PHASE2:Hg19::chr4:15937680..15937694,+#_ad301bbc4362deae027897bd145c3237p@chr4:15937680..15937694, +
3.3e-40FFCP PHASE1:Hg19::chr5:16492681..16492683,+#_ad301bbc4362deae027897bd145c3237p@chr5:16492681..16492683, +
3.3e-40FFCP PHASE1:Hg19::chr17:7990883..7990893,-#_ad301bbc4362deae027897bd145c3237p5@ALOX12B
3.3e-40FFCP PHASE1:Hg19::chr8:120128977..120128984,-#_ad301bbc4362deae027897bd145c3237p@chr8:120128977..120128984, -
3.3e-40FFCP PHASE2:Hg19::chr8:120128977..120128984,-#_ad301bbc4362deae027897bd145c3237p@chr8:120128977..120128984, -
3.3e-40FFCP PHASE2:Hg19::chr5:16492681..16492683,+#_ad301bbc4362deae027897bd145c3237p@chr5:16492681..16492683, +
3.3e-40FFCP PHASE2:Hg19::chr17:7990883..7990893,-#_ad301bbc4362deae027897bd145c3237p5@ALOX12B

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