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{{UBERON
{{UBERON
|id=UBERON:0003513
|alt_id=
|name=trunk blood vessel
|namespace=
|def="A blood vessel that is part of a trunk [Obol]." [OBOL:automatic]
|xref=MA:0000511
|is_a=UBERON:0001981
|synonym="blood vessel of torso" EXACT [OBOL:automatic];;"blood vessel of trunk" EXACT [OBOL:automatic];;"torso blood vessel" EXACT [OBOL:automatic]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A blood vessel that is part of a trunk [Obol]." [OBOL:automatic]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0003513
|is_a=UBERON:0001981
|is_obsolete=
|located_in=
|located_in=
|name=trunk blood vessel
|namespace=
|obo_creation_date=
|part_of=UBERON:0002100
|part_of=UBERON:0002100
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="blood vessel of torso" EXACT [OBOL:automatic];;"blood vessel of trunk" EXACT [OBOL:automatic];;"torso blood vessel" EXACT [OBOL:automatic]
|union_of=
|xref=MA:0000511
}}
}}

Revision as of 11:24, 12 September 2014

Name:trunk blood vessel
Definition:"A blood vessel that is part of a trunk [Obol]." [OBOL:automatic]
Xrefs:
links:
MA:0000511
Synonyms: "blood vessel of torso" EXACT [OBOL:automatic]
"blood vessel of trunk" EXACT [OBOL:automatic]
"torso blood vessel" EXACT [OBOL:automatic]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0001981(blood vessel)
part_of:UBERON:0002100(trunk)



Children

is a:UBERON:0003834 (thoracic segment blood vessel),UBERON:0003835 (abdominal segment blood vessel),UBERON:0005622 (right dorsal aorta),UBERON:0005805 (dorsal aorta)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

  • 11287-116I9 (Smooth Muscle Cells - Internal Thoracic Artery, donor1)
  • 11289-117A2 (Smooth Muscle Cells - Subclavian Artery, donor1)
  • 11364-117I5 (Smooth Muscle Cells - Internal Thoracic Artery, donor2)
  • 11366-117I7 (Smooth Muscle Cells - Subclavian Artery, donor2)
  • 11436-118H5 (Smooth Muscle Cells - Internal Thoracic Artery, donor3)
  • 11438-118H7 (Smooth Muscle Cells - Subclavian Artery, donor3)
  • 11521-119H9 (Hepatic Sinusoidal Endothelial Cells, donor1)
  • 11601-120H8 (Hepatic Sinusoidal Endothelial Cells, donor2)
  • 11682-122H8 (Hepatic Sinusoidal Endothelial Cells, donor3)
  • 11830-124G3 (Mouse hepatic Sinusoidal Endothelial Cells, donor1)

... further results Mouse (Mus musculus)

  • 11287-116I9 (Smooth Muscle Cells - Internal Thoracic Artery, donor1)
  • 11289-117A2 (Smooth Muscle Cells - Subclavian Artery, donor1)
  • 11364-117I5 (Smooth Muscle Cells - Internal Thoracic Artery, donor2)
  • 11366-117I7 (Smooth Muscle Cells - Subclavian Artery, donor2)
  • 11436-118H5 (Smooth Muscle Cells - Internal Thoracic Artery, donor3)
  • 11438-118H7 (Smooth Muscle Cells - Subclavian Artery, donor3)
  • 11521-119H9 (Hepatic Sinusoidal Endothelial Cells, donor1)
  • 11601-120H8 (Hepatic Sinusoidal Endothelial Cells, donor2)
  • 11682-122H8 (Hepatic Sinusoidal Endothelial Cells, donor3)
  • 11830-124G3 (Mouse hepatic Sinusoidal Endothelial Cells, donor1)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003513 (trunk blood vessel), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.07e-86FFCP PHASE1:Mm9::chr3:90270007..90270012,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr3:90270007..90270012, +
3.07e-86FFCP PHASE2:Mm9::chr5:114422970..114422985,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr5:114422970..114422985, -
3.07e-86FFCP PHASE1:Mm9::chr17:28107053..28107062,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr17:28107053..28107062, -
3.07e-86FFCP PHASE2:Mm9::chr4:57687477..57687488,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr4:57687477..57687488, +
3.07e-86FFCP PHASE2:Mm9::chr2:11935531..11935538,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr2:11935531..11935538, -
3.07e-86FFCP PHASE1:Mm9::chr8:3311867..3311873,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr8:3311867..3311873, +
3.07e-86FFCP PHASE1:Mm9::chr11:54785454..54785456,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr11:54785454..54785456, -
3.07e-86FFCP PHASE1:Mm9::chr10:94580525..94580530,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr10:94580525..94580530, +
3.07e-86FFCP PHASE2:Mm9::chr12:25364645..25364655,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr12:25364645..25364655, +
3.07e-86FFCP PHASE2:Mm9::chr18:35900327..35900366,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr18:35900327..35900366, +
3.07e-86FFCP PHASE1:Mm9::chr13:113550715..113550722,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr13:113550715..113550722, -
3.07e-86FFCP PHASE1:Mm9::chr8:87745380..87745385,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr8:87745380..87745385, +
3.07e-86FFCP PHASE1:Mm9::chr11:115280630..115280662,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr11:115280630..115280662, +
3.07e-86FFCP PHASE1:Mm9::chr12:86691575..86691580,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr12:86691575..86691580, -
3.07e-86FFCP PHASE1:Mm9::chr11:88890706..88890745,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr11:88890706..88890745, +
3.07e-86FFCP PHASE2:Mm9::chr13:96429602..96429605,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr13:96429602..96429605, -
3.07e-86FFCP PHASE2:Mm9::chr8:114123814..114123821,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr8:114123814..114123821, -
3.07e-86FFCP PHASE1:Mm9::chr10:8586393..8586401,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr10:8586393..8586401, +
3.07e-86FFCP PHASE2:Mm9::chr17:35106363..35106372,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr17:35106363..35106372, -
3.07e-86FFCP PHASE1:Mm9::chr17:35093764..35093773,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr17:35093764..35093773, -
3.07e-86FFCP PHASE2:Mm9::chr12:74684893..74684910,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr12:74684893..74684910, -
3.07e-86FFCP PHASE2:Mm9::chr4:126939557..126939562,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr4:126939557..126939562, +
3.07e-86FFCP PHASE1:Mm9::chr8:86713876..86713879,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr8:86713876..86713879, +
3.07e-86FFCP PHASE2:Mm9::chr18:5125608..5125613,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr18:5125608..5125613, +
3.07e-86FFCP PHASE1:Mm9::chr12:8400090..8400093,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr12:8400090..8400093, +
3.07e-86FFCP PHASE1:Mm9::chrX:166418658..166418683,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chrX:166418658..166418683, +
3.07e-86FFCP PHASE2:Mm9::chr6:92938260..92938264,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr6:92938260..92938264, -
3.07e-86FFCP PHASE2:Mm9::chr15:97402708..97402712,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr15:97402708..97402712, +
3.07e-86FFCP PHASE2:Mm9::chr18:39297570..39297573,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr18:39297570..39297573, -
3.07e-86FFCP PHASE1:Mm9::chr11:48685851..48685860,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr11:48685851..48685860, -
3.07e-86FFCP PHASE1:Mm9::chr18:47491114..47491123,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr18:47491114..47491123, +
3.07e-86FFCP PHASE2:Mm9::chr14:15179132..15179141,+#_4496c44f15d11b0db3cb2e6f67e2a000p8@Il3ra
3.07e-86FFCP PHASE1:Mm9::chr2:129407463..129407468,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr2:129407463..129407468, -
3.07e-86FFCP PHASE2:Mm9::chr11:54785454..54785456,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr11:54785454..54785456, -
3.07e-86FFCP PHASE2:Mm9::chr11:118287827..118287833,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr11:118287827..118287833, -
3.07e-86FFCP PHASE2:Mm9::chr6:129180613..129180616,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr6:129180613..129180616, +
3.07e-86FFCP PHASE2:Mm9::chr17:34798597..34798606,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr17:34798597..34798606, +
3.07e-86FFCP PHASE2:Mm9::chr5:32912678..32912687,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr5:32912678..32912687, +
3.07e-86FFCP PHASE1:Mm9::chr12:88237840..88237851,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr12:88237840..88237851, -
3.07e-86FFCP PHASE2:Mm9::chr10:93499468..93499494,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr10:93499468..93499494, -
3.07e-86FFCP PHASE2:Mm9::chr10:94580525..94580530,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr10:94580525..94580530, +
3.07e-86FFCP PHASE1:Mm9::chr7:52781901..52781904,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr7:52781901..52781904, +
3.07e-86FFCP PHASE2:Mm9::chr12:8400090..8400093,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr12:8400090..8400093, +
3.07e-86FFCP PHASE2:Mm9::chr1:173044327..173044331,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr1:173044327..173044331, +
3.07e-86FFCP PHASE2:Mm9::chr18:65159026..65159034,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr18:65159026..65159034, -
3.07e-86FFCP PHASE1:Mm9::chr16:85801525..85801529,-#_4496c44f15d11b0db3cb2e6f67e2a000p6@Adamts1
3.07e-86FFCP PHASE2:Mm9::chr9:42915101..42915106,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr9:42915101..42915106, -
3.07e-86FFCP PHASE1:Mm9::chr8:114123814..114123821,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr8:114123814..114123821, -
3.07e-86FFCP PHASE1:Mm9::chr6:48398664..48398684,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr6:48398664..48398684, -
3.07e-86FFCP PHASE2:Mm9::chr13:113543694..113543702,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr13:113543694..113543702, -
3.07e-86FFCP PHASE1:Mm9::chr5:64344878..64344887,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr5:64344878..64344887, -
3.07e-86FFCP PHASE1:Mm9::chr1:137570295..137570315,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr1:137570295..137570315, +
3.07e-86FFCP PHASE2:Mm9::chr8:114250006..114250039,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr8:114250006..114250039, -
3.07e-86FFCP PHASE1:Mm9::chr10:93819538..93819549,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr10:93819538..93819549, +
3.07e-86FFCP PHASE1:Mm9::chr17:35106363..35106372,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr17:35106363..35106372, -
3.07e-86FFCP PHASE1:Mm9::chr11:109223756..109223764,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr11:109223756..109223764, -
3.07e-86FFCP PHASE2:Mm9::chr10:8586393..8586401,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr10:8586393..8586401, +
3.07e-86FFCP PHASE2:Mm9::chr10:117419958..117419964,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr10:117419958..117419964, +
3.07e-86FFCP PHASE1:Mm9::chr11:119254092..119254100,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr11:119254092..119254100, -
3.07e-86FFCP PHASE1:Mm9::chr10:85586219..85586227,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr10:85586219..85586227, +
3.07e-86FFCP PHASE2:Mm9::chr17:35094068..35094092,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr17:35094068..35094092, -
3.07e-86FFCP PHASE1:Mm9::chr17:34798555..34798562,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr17:34798555..34798562, +
3.07e-86FFCP PHASE2:Mm9::chr7:87919399..87919406,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr7:87919399..87919406, +
3.07e-86FFCP PHASE1:Mm9::chr13:113053257..113053258,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr13:113053257..113053258, +
3.07e-86FFCP PHASE2:Mm9::chr14:101778294..101778296,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr14:101778294..101778296, +
3.07e-86FFCP PHASE1:Mm9::chr16:30944451..30944485,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr16:30944451..30944485, +
3.07e-86FFCP PHASE2:Mm9::chr9:62199266..62199267,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr9:62199266..62199267, +
3.07e-86FFCP PHASE2:Mm9::chr10:85586219..85586227,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr10:85586219..85586227, +
3.07e-86FFCP PHASE2:Mm9::chr3:9705000..9705004,-#_4496c44f15d11b0db3cb2e6f67e2a000p4@Pag1
3.07e-86FFCP PHASE2:Mm9::chr5:124112234..124112240,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr5:124112234..124112240, +
3.07e-86FFCP PHASE2:Mm9::chr15:90508949..90508955,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr15:90508949..90508955, -
3.07e-86FFCP PHASE1:Mm9::chr17:67870501..67870507,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr17:67870501..67870507, +
3.07e-86FFCP PHASE1:Mm9::chr12:81955014..81955018,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr12:81955014..81955018, +
3.07e-86FFCP PHASE2:Mm9::chr17:67870501..67870507,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr17:67870501..67870507, +
3.07e-86FFCP PHASE2:Mm9::chr8:87745380..87745385,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr8:87745380..87745385, +
3.07e-86FFCP PHASE1:Mm9::chr15:82209805..82209851,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr15:82209805..82209851, +
3.07e-86FFCP PHASE1:Mm9::chr3:9705000..9705004,-#_4496c44f15d11b0db3cb2e6f67e2a000p4@Pag1
3.07e-86FFCP PHASE1:Mm9::chr18:4336287..4336296,-#_4496c44f15d11b0db3cb2e6f67e2a000p8@Map3k8
3.07e-86FFCP PHASE1:Mm9::chr13:100000226..100000230,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr13:100000226..100000230, +
3.07e-86FFCP PHASE2:Mm9::chr11:117829935..117829959,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr11:117829935..117829959, -
3.07e-86FFCP PHASE2:Mm9::chr10:93942324..93942342,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr10:93942324..93942342, -
3.07e-86FFCP PHASE2:Mm9::chr7:118133901..118133904,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr7:118133901..118133904, -
3.07e-86FFCP PHASE1:Mm9::chr9:42915101..42915106,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr9:42915101..42915106, -
3.07e-86FFCP PHASE2:Mm9::chr10:60279719..60279737,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr10:60279719..60279737, -
3.07e-86FFCP PHASE1:Mm9::chr7:118133901..118133904,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr7:118133901..118133904, -
3.07e-86FFCP PHASE1:Mm9::chr6:15678147..15678149,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr6:15678147..15678149, -
3.07e-86FFCP PHASE1:Mm9::chr16:91441786..91441787,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr16:91441786..91441787, -
3.07e-86FFCP PHASE1:Mm9::chr11:117737077..117737096,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr11:117737077..117737096, -
3.07e-86FFCP PHASE1:Mm9::chr18:35900327..35900366,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr18:35900327..35900366, +
3.07e-86FFCP PHASE2:Mm9::chr5:76329688..76329692,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr5:76329688..76329692, -
3.07e-86FFCP PHASE2:Mm9::chr7:117101788..117101793,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr7:117101788..117101793, +
3.07e-86FFCP PHASE1:Mm9::chr5:75375903..75375931,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr5:75375903..75375931, +
3.07e-86FFCP PHASE1:Mm9::chr16:11009028..11009039,+#_4496c44f15d11b0db3cb2e6f67e2a000p4@Gm4262
3.07e-86FFCP PHASE2:Mm9::chr10:21389022..21389032,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr10:21389022..21389032, +
3.07e-86FFCP PHASE1:Mm9::chr7:109031260..109031268,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr7:109031260..109031268, +
3.07e-86FFCP PHASE1:Mm9::chr17:35945332..35945335,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr17:35945332..35945335, +
3.07e-86FFCP PHASE2:Mm9::chr1:163794592..163794593,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr1:163794592..163794593, +
3.07e-86FFCP PHASE2:Mm9::chr4:100890388..100890423,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr4:100890388..100890423, +
3.07e-86FFCP PHASE2:Mm9::chr12:86691503..86691504,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr12:86691503..86691504, -
3.07e-86FFCP PHASE2:Mm9::chr5:75375903..75375931,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr5:75375903..75375931, +

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