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{{UBERON
{{UBERON
|id=UBERON:0003921
|alt_id=
|name=pancreas primordium
|namespace=
|def="embryonic structure that develops into pancreatic bud." [http://en.wikipedia.org/wiki/Pancreas#Embryological_development]
|xref=EFO:0003434;;EHDAA2:0001382;;EHDAA:2163;;EMAPA:17066;;FMA:79792;;http://upload.wikimedia.org/wikipedia/commons/thumb/d/db/Gray982.png/200px-Gray982.png;;TAO:0000254;;XAO:0001101;;ZFA:0000254
|is_a=UBERON:0001048
|synonym="pancreatic anlage" RELATED [];;"pancreatic primordium" EXACT [];;"primordial pancreas" RELATED [FMA:79792]
|comment=AO notes: in EHDAA2 this has dorsal and ventral primordia as parts. the buds are part of the primordium, with the ducts developing from the buds; only parenchyma and ducts have contribution from buds. Terminology notes: revisit after standardizing terms 'primordium', 'anlagen', 'bud'
|comment=AO notes: in EHDAA2 this has dorsal and ventral primordia as parts. the buds are part of the primordium, with the ducts developing from the buds; only parenchyma and ducts have contribution from buds. Terminology notes: revisit after standardizing terms 'primordium', 'anlagen', 'bud'
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="embryonic structure that develops into pancreatic bud." [http://en.wikipedia.org/wiki/Pancreas#Embryological_development]
|subset=vertebrate_core
|derives_from=
|derives_from=
|develops_from=UBERON:0000925
|develops_from=UBERON:0000925
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0003921
|is_a=UBERON:0001048
|is_obsolete=
|located_in=
|located_in=
|name=pancreas primordium
|namespace=
|obo_creation_date=
|part_of=UBERON:0000922;;UBERON:0007026
|part_of=UBERON:0000922;;UBERON:0007026
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=vertebrate_core
|preceded_by=
|synonym="pancreatic anlage" RELATED [];;"pancreatic primordium" EXACT [];;"primordial pancreas" RELATED [FMA:79792]
|union_of=
|xref=EFO:0003434;;EHDAA2:0001382;;EHDAA:2163;;EMAPA:17066;;FMA:79792;;http://upload.wikimedia.org/wikipedia/commons/thumb/d/db/Gray982.png/200px-Gray982.png;;TAO:0000254;;XAO:0001101;;ZFA:0000254
}}
}}

Revision as of 11:26, 12 September 2014

Name:pancreas primordium
Definition:"embryonic structure that develops into pancreatic bud." [1]
Xrefs:
links:

EFO:0003434
EHDAA2:0001382
EHDAA:2163
EMAPA:17066
FMA:79792
[ 200px-Gray982.png 200px-Gray982.png]
TAO:0000254
XAO:0001101

ZFA:0000254
Synonyms: "pancreatic anlage" RELATED []
"pancreatic primordium" EXACT []
"primordial pancreas" RELATED [FMA:79792]
Comments:AO notes: in EHDAA2 this has dorsal and ventral primordia as parts. the buds are part of the primordium, with the ducts developing from the buds; only parenchyma and ducts have contribution from buds. Terminology notes: revisit after standardizing terms 'primordium', 'anlagen', 'bud'
Subset: vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0001048(primordium)
develops_from:UBERON:0000925(endoderm)
part_of:UBERON:0000922(embryo),UBERON:0007026(primitive gut)



Children

part of:UBERON:0003922 (pancreatic epithelial bud),UBERON:0010375 (pancreas dorsal primordium)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003921 (pancreas primordium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


No analysis results