Personal tools

UBERON:0005086: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{UBERON
{{UBERON
|id=UBERON:0005086
|alt_id=
|name=hair follicle placode
|namespace=
|def="An hair follicle placode is a thickening of the ectoderm that will give rise to the hair follicle bud[GO]." [GO:0060789]
|xref=
|is_a=UBERON:0005085
|synonym="hair gem" RELATED [ISBN:9780878932504];;"hair peg" RELATED [ISBN:9780878932504];;"vibrissa placode" NARROW []
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="An hair follicle placode is a thickening of the ectoderm that will give rise to the hair follicle bud[GO]." [GO:0060789]
|subset=
|derives_from=
|derives_from=
|develops_from=UBERON:0001003
|develops_from=UBERON:0001003;;UBERON:0011272
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0005086
|is_a=UBERON:0011817
|is_obsolete=
|located_in=
|located_in=
|name=hair follicle placode
|namespace=
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="hair gem" RELATED [ISBN:9780878932504];;"hair peg" RELATED [ISBN:9780878932504];;"vibrissa placode" NARROW []
|union_of=
|xref=
}}
}}

Revision as of 11:33, 12 September 2014

Name:hair follicle placode
Definition:"An hair follicle placode is a thickening of the ectoderm that will give rise to the hair follicle bud[GO]." [GO:0060789]
Synonyms: "hair gem" RELATED [ISBN:9780878932504]
"hair peg" RELATED [ISBN:9780878932504]
"vibrissa placode" NARROW []

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0011817(follicle placode)
develops_from:UBERON:0001003(skin epidermis),UBERON:0011272(embryonic skin basal layer)



Children

develops from:UBERON:0002073 (hair follicle)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005086 (hair follicle placode), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.48e-40FFCP PHASE1:Hg19::chr7:127963997..127964004,-#_2356679e9fac7f5eebdc1e1f0ea6d8cdp@chr7:127963997..127964004, -
1.48e-40FFCP PHASE2:Hg19::chr7:127963997..127964004,-#_2356679e9fac7f5eebdc1e1f0ea6d8cdp@chr7:127963997..127964004, -
3.31e-40FFCP PHASE2:Hg19::chr16:85617034..85617043,-#_41639ab3053ab623a60d0ead8799ff27p@chr16:85617034..85617043, -
3.31e-40FFCP PHASE1:Hg19::chr16:85617034..85617043,-#_41639ab3053ab623a60d0ead8799ff27p@chr16:85617034..85617043, -
4.05e-40FFCP PHASE1:Hg19::chr3:4723000..4723006,+#_ca6e2bc014ca7f888912ca1444e5de8fp@chr3:4723000..4723006, +
4.05e-40FFCP PHASE2:Hg19::chr3:4723000..4723006,+#_ca6e2bc014ca7f888912ca1444e5de8fp@chr3:4723000..4723006, +
4.05e-40FFCP PHASE1:Hg19::chr5:174252850..174252859,+#_ca6e2bc014ca7f888912ca1444e5de8fp@chr5:174252850..174252859, +
4.05e-40FFCP PHASE2:Hg19::chr5:174252850..174252859,+#_ca6e2bc014ca7f888912ca1444e5de8fp@chr5:174252850..174252859, +
9.7e-37FFCP PHASE2:Hg19::chr20:940152..940156,-#_90ed4eab05a473ea045babc5746909dfp@chr20:940152..940156, -
9.7e-37FFCP PHASE1:Hg19::chr20:940152..940156,-#_90ed4eab05a473ea045babc5746909dfp@chr20:940152..940156, -
3.25e-36FFCP PHASE1:Hg19::chr1:119530682..119530692,-#_382ca37dcc1e8afc05e92fc9e8c3d5b7p10@TBX15
3.25e-36FFCP PHASE2:Hg19::chr1:119530682..119530692,-#_382ca37dcc1e8afc05e92fc9e8c3d5b7p10@TBX15
4.66e-36FFCP PHASE1:Hg19::chr17:73682761..73682766,+#_7036e4d19aa87e1f109e751da98d760cp@chr17:73682761..73682766, +
4.66e-36FFCP PHASE2:Hg19::chr17:73682761..73682766,+#_7036e4d19aa87e1f109e751da98d760cp@chr17:73682761..73682766, +
1.44e-32FFCP PHASE2:Hg19::chr9:132337391..132337396,+#_223311870bc2089e308ee1dde10e4284p2@ENST00000443993, p2@uc004bya.1
1.44e-32FFCP PHASE2:Hg19::chr1:8950583..8950588,+#_223311870bc2089e308ee1dde10e4284p@chr1:8950583..8950588, +
1.44e-32FFCP PHASE1:Hg19::chr1:8950583..8950588,+#_223311870bc2089e308ee1dde10e4284p@chr1:8950583..8950588, +
1.44e-32FFCP PHASE1:Hg19::chr9:132337391..132337396,+#_223311870bc2089e308ee1dde10e4284p2@ENST00000443993, p2@uc004bya.1
1.7e-32FFCP PHASE1:Hg19::chr12:5198401..5198415,+#_a215c65be2d81b3c388a49825456bd4ap@chr12:5198401..5198415, +
1.7e-32FFCP PHASE1:Hg19::chr12:2163623..2163634,+#_a215c65be2d81b3c388a49825456bd4ap@chr12:2163623..2163634, +
1.7e-32FFCP PHASE2:Hg19::chr12:5198401..5198415,+#_a215c65be2d81b3c388a49825456bd4ap@chr12:5198401..5198415, +
1.7e-32FFCP PHASE2:Hg19::chr12:2163623..2163634,+#_a215c65be2d81b3c388a49825456bd4ap@chr12:2163623..2163634, +
2.86e-30FFCP PHASE1:Hg19::chr7:142563953..142563963,+#_53e87d88c1f5418b0866eb05f4ba23c1p@chr7:142563953..142563963, +
2.86e-30FFCP PHASE2:Hg19::chr7:142563953..142563963,+#_53e87d88c1f5418b0866eb05f4ba23c1p@chr7:142563953..142563963, +
3.66e-28FFCP PHASE2:Hg19::chr15:80842979..80842998,+#_6d435be073ff585e83619608b3ab5a72p20@ARNT2
3.66e-28FFCP PHASE1:Hg19::chr15:80842979..80842998,+#_6d435be073ff585e83619608b3ab5a72p20@ARNT2
3.91e-28FFCP PHASE1:Hg19::chr9:89892210..89892234,-#_99fbb2c027022a6619310497ae68ecf5p@chr9:89892210..89892234, -
3.91e-28FFCP PHASE2:Hg19::chr9:89892210..89892234,-#_99fbb2c027022a6619310497ae68ecf5p@chr9:89892210..89892234, -
7.91e-28FFCP PHASE1:Hg19::chr2:119605374..119605377,-#_a6f39e547ffab2c8a8ab18ce9497c3b4p7@EN1
7.91e-28FFCP PHASE2:Hg19::chr2:119605374..119605377,-#_a6f39e547ffab2c8a8ab18ce9497c3b4p7@EN1
2.72e-27FFCP PHASE1:Hg19::chr16:85617044..85617059,-#_bddcdda20267cdfe998adc4a5b84bdfep@chr16:85617044..85617059, -
2.72e-27FFCP PHASE1:Hg19::chr10:15760985..15760992,-#_bddcdda20267cdfe998adc4a5b84bdfep@chr10:15760985..15760992, -
2.72e-27FFCP PHASE2:Hg19::chr16:85617044..85617059,-#_bddcdda20267cdfe998adc4a5b84bdfep@chr16:85617044..85617059, -
2.72e-27FFCP PHASE2:Hg19::chr10:15760985..15760992,-#_bddcdda20267cdfe998adc4a5b84bdfep@chr10:15760985..15760992, -
4.63e-27FFCP PHASE2:Hg19::chr12:56224522..56224535,-#_ee4b85c61f88d131b83623f533327882p7@DNAJC14
4.63e-27FFCP PHASE1:Hg19::chr12:56224522..56224535,-#_ee4b85c61f88d131b83623f533327882p7@DNAJC14
1.85e-26FFCP PHASE2:Hg19::chr18:8747536..8747542,-#_22c443e0bb5a41f94b286b8718ba1c5ap@chr18:8747536..8747542, -
1.85e-26FFCP PHASE1:Hg19::chr18:8747536..8747542,-#_22c443e0bb5a41f94b286b8718ba1c5ap@chr18:8747536..8747542, -
1.48e-25FFCP PHASE1:Hg19::chr2:119605253..119605264,-#_94bfc073a9a9105b2a3676c51cf333edp5@EN1
1.48e-25FFCP PHASE2:Hg19::chr2:119605253..119605264,-#_94bfc073a9a9105b2a3676c51cf333edp5@EN1
1.2e-24FFCP PHASE1:Hg19::chr11:121896688..121896697,-#_9ae96d4f7dd3a43bf217de9bb4c12ff9p@chr11:121896688..121896697, -
1.2e-24FFCP PHASE2:Hg19::chr11:121896688..121896697,-#_9ae96d4f7dd3a43bf217de9bb4c12ff9p@chr11:121896688..121896697, -
1.35e-24FFCP PHASE1:Hg19::chr15:90348431..90348458,-#_dc463129f383d225b7c412626bddfd91p17@ANPEP
1.35e-24FFCP PHASE2:Hg19::chr15:90348431..90348458,-#_dc463129f383d225b7c412626bddfd91p17@ANPEP
1.02e-23FFCP PHASE2:Hg19::chr15:39534820..39534834,+#_b2a97811ec54b07e6e0089f9c571c6b4p@chr15:39534820..39534834, +
1.02e-23FFCP PHASE1:Hg19::chr15:39534820..39534834,+#_b2a97811ec54b07e6e0089f9c571c6b4p@chr15:39534820..39534834, +
1.14e-23FFCP PHASE2:Hg19::chr2:238153616..238153621,-#_0e12314b837d105b2a6f5fe2d55cc96ep@chr2:238153616..238153621, -
1.14e-23FFCP PHASE1:Hg19::chr2:238153616..238153621,-#_0e12314b837d105b2a6f5fe2d55cc96ep@chr2:238153616..238153621, -
1.61e-23FFCP PHASE1:Hg19::chr3:147109858..147109861,+#_f00f8fd71d006d94977d9bd64fd8281bp@chr3:147109858..147109861, +
1.61e-23FFCP PHASE2:Hg19::chr3:147109858..147109861,+#_f00f8fd71d006d94977d9bd64fd8281bp@chr3:147109858..147109861, +
1.81e-23FFCP PHASE1:Hg19::chr3:147128048..147128057,+#_21bed12e509ed1453570e08df756b83ep4@AB464362
1.81e-23FFCP PHASE2:Hg19::chr3:147128048..147128057,+#_21bed12e509ed1453570e08df756b83ep4@AB464362
2.77e-23FFCP PHASE1:Hg19::chr3:147112699..147112713,-#_d107dbadcf87a441f3515a59b8b842b1p@chr3:147112699..147112713, -
2.77e-23FFCP PHASE2:Hg19::chr3:147112699..147112713,-#_d107dbadcf87a441f3515a59b8b842b1p@chr3:147112699..147112713, -
3.75e-23FFCP PHASE2:Hg19::chr21:47405885..47405896,+#_00feafbec5e0822b93f628e69cd476c6p@chr21:47405885..47405896, +
3.75e-23FFCP PHASE1:Hg19::chr21:47405885..47405896,+#_00feafbec5e0822b93f628e69cd476c6p@chr21:47405885..47405896, +
5.46e-23FFCP PHASE2:Hg19::chr15:80800274..80800278,-#_954f8984913723d45ab2f1f6529950d3p@chr15:80800274..80800278, -
5.46e-23FFCP PHASE1:Hg19::chr15:80800274..80800278,-#_954f8984913723d45ab2f1f6529950d3p@chr15:80800274..80800278, -
8.54e-23FFCP PHASE1:Hg19::chr6:5498703..5498727,+#_fa1e99a097a7d443c1814ec0f9c2f175p@chr6:5498703..5498727, +
8.54e-23FFCP PHASE2:Hg19::chr6:5498703..5498727,+#_fa1e99a097a7d443c1814ec0f9c2f175p@chr6:5498703..5498727, +
3.99e-22FFCP PHASE2:Hg19::chr2:119605233..119605245,-#_754e8353856cb7a02cdd2e47a246afa7p8@EN1
3.99e-22FFCP PHASE1:Hg19::chr2:119605233..119605245,-#_754e8353856cb7a02cdd2e47a246afa7p8@EN1
5.15e-21FFCP PHASE2:Hg19::chr13:30075330..30075333,+#_56d0b85f39a859dd9b56bb3e46905714p@chr13:30075330..30075333, +
5.15e-21FFCP PHASE2:Hg19::chr12:69754026..69754035,+#_56d0b85f39a859dd9b56bb3e46905714p@chr12:69754026..69754035, +
5.15e-21FFCP PHASE2:Hg19::chr20:55403726..55403730,+#_56d0b85f39a859dd9b56bb3e46905714p@chr20:55403726..55403730, +
5.15e-21FFCP PHASE2:Hg19::chr13:114108115..114108122,-#_56d0b85f39a859dd9b56bb3e46905714p13@ADPRHL1
5.15e-21FFCP PHASE1:Hg19::chr7:93928562..93928567,+#_56d0b85f39a859dd9b56bb3e46905714p@chr7:93928562..93928567, +
5.15e-21FFCP PHASE2:Hg19::chr9:88939319..88939326,-#_56d0b85f39a859dd9b56bb3e46905714p25@ZCCHC6
5.15e-21FFCP PHASE2:Hg19::chr9:3330877..3330914,-#_56d0b85f39a859dd9b56bb3e46905714p@chr9:3330877..3330914, -
5.15e-21FFCP PHASE1:Hg19::chr5:53358788..53358795,-#_56d0b85f39a859dd9b56bb3e46905714p@chr5:53358788..53358795, -
5.15e-21FFCP PHASE2:Hg19::chr13:45914842..45914847,-#_56d0b85f39a859dd9b56bb3e46905714p14@TPT1
5.15e-21FFCP PHASE1:Hg19::chr13:50654430..50654438,+#_56d0b85f39a859dd9b56bb3e46905714p@chr13:50654430..50654438, +
5.15e-21FFCP PHASE2:Hg19::chr8:23210765..23210805,+#_56d0b85f39a859dd9b56bb3e46905714p@chr8:23210765..23210805, +
5.15e-21FFCP PHASE1:Hg19::chr5:150398982..150399013,-#_56d0b85f39a859dd9b56bb3e46905714p@chr5:150398982..150399013, -
5.15e-21FFCP PHASE1:Hg19::chr11:118789349..118789355,+#_56d0b85f39a859dd9b56bb3e46905714p@chr11:118789349..118789355, +
5.15e-21FFCP PHASE1:Hg19::chr3:124485247..124485272,-#_56d0b85f39a859dd9b56bb3e46905714p@chr3:124485247..124485272, -
5.15e-21FFCP PHASE1:Hg19::chr4:151246994..151247003,-#_56d0b85f39a859dd9b56bb3e46905714p@chr4:151246994..151247003, -
5.15e-21FFCP PHASE1:Hg19::chr6:26305727..26305730,-#_56d0b85f39a859dd9b56bb3e46905714p@chr6:26305727..26305730, -
5.15e-21FFCP PHASE2:Hg19::chr11:118789349..118789355,+#_56d0b85f39a859dd9b56bb3e46905714p@chr11:118789349..118789355, +
5.15e-21FFCP PHASE1:Hg19::chr9:35748867..35748868,-#_56d0b85f39a859dd9b56bb3e46905714p13@GBA2
5.15e-21FFCP PHASE1:Hg19::chr11:6341147..6341156,-#_56d0b85f39a859dd9b56bb3e46905714p14@PRKCDBP
5.15e-21FFCP PHASE1:Hg19::chr20:55403726..55403730,+#_56d0b85f39a859dd9b56bb3e46905714p@chr20:55403726..55403730, +
5.15e-21FFCP PHASE2:Hg19::chr15:40773537..40773544,-#_56d0b85f39a859dd9b56bb3e46905714p1@ENST00000489027
5.15e-21FFCP PHASE1:Hg19::chr6:168333065..168333071,+#_56d0b85f39a859dd9b56bb3e46905714p33@MLLT4
5.15e-21FFCP PHASE2:Hg19::chr2:30864461..30864472,+#_56d0b85f39a859dd9b56bb3e46905714p11@LCLAT1
5.15e-21FFCP PHASE2:Hg19::chr11:6341147..6341156,-#_56d0b85f39a859dd9b56bb3e46905714p14@PRKCDBP
5.15e-21FFCP PHASE1:Hg19::chr13:30075330..30075333,+#_56d0b85f39a859dd9b56bb3e46905714p@chr13:30075330..30075333, +
5.15e-21FFCP PHASE1:Hg19::chr12:69754026..69754035,+#_56d0b85f39a859dd9b56bb3e46905714p@chr12:69754026..69754035, +
5.15e-21FFCP PHASE1:Hg19::chr10:90750010..90750015,+#_56d0b85f39a859dd9b56bb3e46905714p15@FAS
5.15e-21FFCP PHASE2:Hg19::chr7:93928562..93928567,+#_56d0b85f39a859dd9b56bb3e46905714p@chr7:93928562..93928567, +
5.15e-21FFCP PHASE2:Hg19::chr10:90750010..90750015,+#_56d0b85f39a859dd9b56bb3e46905714p15@FAS
5.15e-21FFCP PHASE1:Hg19::chr13:114108115..114108122,-#_56d0b85f39a859dd9b56bb3e46905714p13@ADPRHL1
5.15e-21FFCP PHASE2:Hg19::chr5:53358788..53358795,-#_56d0b85f39a859dd9b56bb3e46905714p@chr5:53358788..53358795, -
5.15e-21FFCP PHASE2:Hg19::chr13:50654430..50654438,+#_56d0b85f39a859dd9b56bb3e46905714p@chr13:50654430..50654438, +
5.15e-21FFCP PHASE1:Hg19::chr9:88939319..88939326,-#_56d0b85f39a859dd9b56bb3e46905714p25@ZCCHC6
5.15e-21FFCP PHASE2:Hg19::chr3:124485247..124485272,-#_56d0b85f39a859dd9b56bb3e46905714p@chr3:124485247..124485272, -
5.15e-21FFCP PHASE2:Hg19::chr6:26305727..26305730,-#_56d0b85f39a859dd9b56bb3e46905714p@chr6:26305727..26305730, -
5.15e-21FFCP PHASE1:Hg19::chr9:3330877..3330914,-#_56d0b85f39a859dd9b56bb3e46905714p@chr9:3330877..3330914, -
5.15e-21FFCP PHASE2:Hg19::chr9:35748867..35748868,-#_56d0b85f39a859dd9b56bb3e46905714p13@GBA2
5.15e-21FFCP PHASE1:Hg19::chr13:45914842..45914847,-#_56d0b85f39a859dd9b56bb3e46905714p14@TPT1

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0005086&oldid=3274408"