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{{CL
{{CL
|id=CL:0000067
|alt_id=
|name=ciliated epithelial cell
|namespace=cell
|def="An epithelial cell that has a cillia." [GOC:tfm]
|xref=FMA:70605
|is_a=CL:0000064;;CL:0000075
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="An epithelial cell that has a cillia." [GOC:tfm]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0000067
|is_a=CL:0000064 ;;CL:0000075
|is_obsolete=
|located_in=
|located_in=
|name=ciliated epithelial cell
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=FMA:70605
}}
}}

Latest revision as of 16:29, 12 September 2014

Name:ciliated epithelial cell
Namespace:FANTOM
Definition:"An epithelial cell that has a cillia." [GOC:tfm]
Xrefs:
links:
FMA:70605


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000064(ciliated cell),CL:0000075(columnar/cuboidal epithelial cell)



Children


is a:CL:0002304 (non-pigmented ciliary epithelial cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000067 (ciliated epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
8.93e-147FFCP PHASE2:Hg19::chr12:97856211..97856221,+#_eccf1cbb159f4d45447936ed915500bep@chr12:97856211..97856221, +
8.93e-147FFCP PHASE1:Hg19::chr12:97856211..97856221,+#_eccf1cbb159f4d45447936ed915500bep@chr12:97856211..97856221, +
7.78e-118FFCP PHASE2:Hg19::chr13:36052762..36052767,-#_fe41b3959c09d57cef57b9c0956bdf6ep@chr13:36052762..36052767, -
7.78e-118FFCP PHASE2:Hg19::chr8:41119800..41119811,-#_fe41b3959c09d57cef57b9c0956bdf6ep5@SFRP1
7.78e-118FFCP PHASE1:Hg19::chr13:36052762..36052767,-#_fe41b3959c09d57cef57b9c0956bdf6ep@chr13:36052762..36052767, -
7.78e-118FFCP PHASE1:Hg19::chr8:41119800..41119811,-#_fe41b3959c09d57cef57b9c0956bdf6ep5@SFRP1
2.59e-117FFCP PHASE1:Hg19::chr16:58896129..58896134,-#_12faf7c4849aad2e33b1951b46512dc4p@chr16:58896129..58896134, -
2.59e-117FFCP PHASE1:Hg19::chrX:106198807..106198826,-#_12faf7c4849aad2e33b1951b46512dc4p@chrX:106198807..106198826, -
2.59e-117FFCP PHASE2:Hg19::chrX:106198807..106198826,-#_12faf7c4849aad2e33b1951b46512dc4p@chrX:106198807..106198826, -
2.59e-117FFCP PHASE2:Hg19::chr16:58896129..58896134,-#_12faf7c4849aad2e33b1951b46512dc4p@chr16:58896129..58896134, -
4.06e-99FFCP PHASE1:Hg19::chr14:61654180..61654191,+#_8a2f5595773555e2ac970094c2dbf0d0p33@PRKCH
4.06e-99FFCP PHASE2:Hg19::chr14:61654180..61654191,+#_8a2f5595773555e2ac970094c2dbf0d0p33@PRKCH
1.55e-98FFCP PHASE1:Hg19::chrX:106146585..106146594,-#_5265a70a032a89d641bce30b3cde3e24p2@RIPPLY1
1.55e-98FFCP PHASE2:Hg19::chrX:106146585..106146594,-#_5265a70a032a89d641bce30b3cde3e24p2@RIPPLY1
6.24e-88FFCP PHASE1:Hg19::chr2:210798666..210798677,+#_66a8cded2bdce02a545bb169eb07f5f3p@chr2:210798666..210798677, +
6.24e-88FFCP PHASE2:Hg19::chr2:210798666..210798677,+#_66a8cded2bdce02a545bb169eb07f5f3p@chr2:210798666..210798677, +
1.52e-87FFCP PHASE1:Hg19::chr13:36052713..36052724,-#_ddcb17fc8c392e8d702fe70179b6e8f7p@chr13:36052713..36052724, -
1.52e-87FFCP PHASE2:Hg19::chr13:36052713..36052724,-#_ddcb17fc8c392e8d702fe70179b6e8f7p@chr13:36052713..36052724, -
4.06e-85FFCP PHASE2:Hg19::chr11:27240276..27240289,-#_f0eb9fd599c2ba253c9b690ea8dac12cp1@ENST00000526061
4.06e-85FFCP PHASE1:Hg19::chr11:27240276..27240289,-#_f0eb9fd599c2ba253c9b690ea8dac12cp1@ENST00000526061
9.61e-85FFCP PHASE2:Hg19::chr10:91294399..91294401,-#_9a0f8f5142989e9b0224664c0eeec432p@chr10:91294399..91294401, -
9.61e-85FFCP PHASE1:Hg19::chr10:91294399..91294401,-#_9a0f8f5142989e9b0224664c0eeec432p@chr10:91294399..91294401, -
1.28e-84FFCP PHASE1:Hg19::chr8:53853672..53853682,-#_6fc9e43c08d4a66d294f37b419e89161p1@BC033145
1.28e-84FFCP PHASE2:Hg19::chr8:53853672..53853682,-#_6fc9e43c08d4a66d294f37b419e89161p1@BC033145
4.72e-75FFCP PHASE1:Hg19::chr2:45166478..45166502,-#_b26e4981fe70dd5a06cc82d2b8711730p3@ENST00000437916
4.72e-75FFCP PHASE2:Hg19::chr2:45166478..45166502,-#_b26e4981fe70dd5a06cc82d2b8711730p3@ENST00000437916
1.66e-74FFCP PHASE1:Hg19::chr8:94713146..94713159,+#_d291c992b8851932a9b2d81bc1d7eecdp8@FAM92A1
1.66e-74FFCP PHASE2:Hg19::chr8:94713146..94713159,+#_d291c992b8851932a9b2d81bc1d7eecdp8@FAM92A1
2.75e-74FFCP PHASE2:Hg19::chr4:183006122..183006131,-#_5d775a3cd578992667f019a5fcdc8b75p3@ENST00000505537
2.75e-74FFCP PHASE1:Hg19::chr4:183006122..183006131,-#_5d775a3cd578992667f019a5fcdc8b75p3@ENST00000505537
7.85e-67FFCP PHASE1:Hg19::chr3:110846331..110846333,+#_3c49f1e69769d3a314996a3e32b9215cp@chr3:110846331..110846333, +
7.85e-67FFCP PHASE2:Hg19::chr3:110846331..110846333,+#_3c49f1e69769d3a314996a3e32b9215cp@chr3:110846331..110846333, +
9.82e-67FFCP PHASE1:Hg19::chr2:237677787..237677800,+#_6ea6a56974226790ecfa0bfeba6a4be9p@chr2:237677787..237677800, +
9.82e-67FFCP PHASE2:Hg19::chr2:237677787..237677800,+#_6ea6a56974226790ecfa0bfeba6a4be9p@chr2:237677787..237677800, +
1.54e-66FFCP PHASE2:Hg19::chr11:89224826..89224839,-#_b991d7d5a5790bfa8b6791637c29da78p14@NOX4
1.54e-66FFCP PHASE1:Hg19::chr11:89224826..89224839,-#_b991d7d5a5790bfa8b6791637c29da78p14@NOX4
1.71e-66FFCP PHASE1:Hg19::chr1:218579326..218579337,+#_cab83b01c0d7dbf2543c66fe8d971942p@chr1:218579326..218579337, +
1.71e-66FFCP PHASE2:Hg19::chr1:218579326..218579337,+#_cab83b01c0d7dbf2543c66fe8d971942p@chr1:218579326..218579337, +
2.39e-66FFCP PHASE1:Hg19::chr2:63196015..63196016,+#_53213fa07a3dd789963473149055124dp@chr2:63196015..63196016, +
2.39e-66FFCP PHASE1:Hg19::chr19:30716539..30716546,+#_53213fa07a3dd789963473149055124dp@chr19:30716539..30716546, +
2.39e-66FFCP PHASE2:Hg19::chr2:63196015..63196016,+#_53213fa07a3dd789963473149055124dp@chr2:63196015..63196016, +
2.39e-66FFCP PHASE2:Hg19::chr19:30716539..30716546,+#_53213fa07a3dd789963473149055124dp@chr19:30716539..30716546, +
2.4e-66FFCP PHASE1:Hg19::chr7:115723897..115723915,-#_1c103dcc2d025f02dc2cffb382b60e90p@chr7:115723897..115723915, -
2.4e-66FFCP PHASE2:Hg19::chr7:115723897..115723915,-#_1c103dcc2d025f02dc2cffb382b60e90p@chr7:115723897..115723915, -
2.41e-66FFCP PHASE1:Hg19::chr3:139258648..139258667,+#_32da30241ff1adbbf5bc59c93cf070bfp1@ENST00000381790
2.41e-66FFCP PHASE2:Hg19::chr3:139258648..139258667,+#_32da30241ff1adbbf5bc59c93cf070bfp1@ENST00000381790
3.35e-66FFCP PHASE1:Hg19::chr15:79501729..79501736,+#_bbe9b36cc1882d99d48c8ed28ede18d0p1@MIR184
3.35e-66FFCP PHASE2:Hg19::chr15:79501729..79501736,+#_bbe9b36cc1882d99d48c8ed28ede18d0p1@MIR184
4.68e-66FFCP PHASE2:Hg19::chr3:50191610..50191612,-#_bd0df96573fb2f68ec0ffaf6ea2bb495p@chr3:50191610..50191612, -
4.68e-66FFCP PHASE1:Hg19::chr3:50191610..50191612,-#_bd0df96573fb2f68ec0ffaf6ea2bb495p@chr3:50191610..50191612, -
6.53e-66FFCP PHASE1:Hg19::chrX:106142727..106142730,-#_ac309c257b6197c756b614883964264cp@chrX:106142727..106142730, -
6.53e-66FFCP PHASE1:Hg19::chr1:12416343..12416350,+#_ac309c257b6197c756b614883964264cp@chr1:12416343..12416350, +
6.53e-66FFCP PHASE2:Hg19::chrX:106142727..106142730,-#_ac309c257b6197c756b614883964264cp@chrX:106142727..106142730, -
6.53e-66FFCP PHASE2:Hg19::chr1:12416343..12416350,+#_ac309c257b6197c756b614883964264cp@chr1:12416343..12416350, +
2.43e-60FFCP PHASE1:Hg19::chr5:31235359..31235362,+#_90946aa60f3d9d17f3474b2954e03fcep@chr5:31235359..31235362, +
2.43e-60FFCP PHASE2:Hg19::chr5:31235359..31235362,+#_90946aa60f3d9d17f3474b2954e03fcep@chr5:31235359..31235362, +
8.17e-60FFCP PHASE2:Hg19::chr3:150690508..150690520,-#_5a2954728c9d69003b803a0f368bb364p1@CLRN1
8.17e-60FFCP PHASE1:Hg19::chr3:150690508..150690520,-#_5a2954728c9d69003b803a0f368bb364p1@CLRN1
2.73e-59FFCP PHASE1:Hg19::chr8:124692287..124692298,+#_9f170ff630515fee3c13b5624bd091dbp@chr8:124692287..124692298, +
2.73e-59FFCP PHASE2:Hg19::chr8:124692287..124692298,+#_9f170ff630515fee3c13b5624bd091dbp@chr8:124692287..124692298, +
2.4e-55FFCP PHASE2:Hg19::chr3:110888243..110888248,+#_f5dbf76585633218c569f3dacf1d48f6p@chr3:110888243..110888248, +
2.4e-55FFCP PHASE1:Hg19::chr14:61654271..61654282,+#_f5dbf76585633218c569f3dacf1d48f6p30@PRKCH
2.4e-55FFCP PHASE2:Hg19::chr14:61654271..61654282,+#_f5dbf76585633218c569f3dacf1d48f6p30@PRKCH
2.4e-55FFCP PHASE1:Hg19::chr3:110888243..110888248,+#_f5dbf76585633218c569f3dacf1d48f6p@chr3:110888243..110888248, +
7.24e-55FFCP PHASE1:Hg19::chr14:60975914..60975925,+#_fc976f6b42b10f56840a917c004490eep5@SIX6
7.24e-55FFCP PHASE2:Hg19::chr14:60975914..60975925,+#_fc976f6b42b10f56840a917c004490eep5@SIX6
1.25e-54FFCP PHASE1:Hg19::chr14:60981789..60981803,+#_65d4862087bc05bbb76d1f500e02f9cep1@ENST00000557618
1.25e-54FFCP PHASE2:Hg19::chr14:60981789..60981803,+#_65d4862087bc05bbb76d1f500e02f9cep1@ENST00000557618
3.76e-54FFCP PHASE2:Hg19::chr2:45168617..45168631,-#_aaf829a5ff34ece438c4684f9e9afb01p1@ENST00000456467
3.76e-54FFCP PHASE1:Hg19::chr2:45168617..45168631,-#_aaf829a5ff34ece438c4684f9e9afb01p1@ENST00000456467
1.68e-53FFCP PHASE1:Hg19::chr7:115723925..115723935,-#_6fa96b69958761fb643c0b210a381f8ep@chr7:115723925..115723935, -
1.68e-53FFCP PHASE2:Hg19::chr7:115723925..115723935,-#_6fa96b69958761fb643c0b210a381f8ep@chr7:115723925..115723935, -
2.87e-53FFCP PHASE1:Hg19::chr4:169623845..169623853,+#_f8460203be12367f5e0bae20eb39f15cp@chr4:169623845..169623853, +
2.87e-53FFCP PHASE1:Hg19::chr2:35680607..35680613,-#_f8460203be12367f5e0bae20eb39f15cp@chr2:35680607..35680613, -
2.87e-53FFCP PHASE2:Hg19::chr4:169623845..169623853,+#_f8460203be12367f5e0bae20eb39f15cp@chr4:169623845..169623853, +
2.87e-53FFCP PHASE2:Hg19::chr2:35680607..35680613,-#_f8460203be12367f5e0bae20eb39f15cp@chr2:35680607..35680613, -
2.87e-53FFCP PHASE2:Hg19::chr11:31671561..31671580,+#_f8460203be12367f5e0bae20eb39f15cp@chr11:31671561..31671580, +
2.87e-53FFCP PHASE1:Hg19::chr11:31671561..31671580,+#_f8460203be12367f5e0bae20eb39f15cp@chr11:31671561..31671580, +
6.39e-53FFCP PHASE1:Hg19::chr7:131803806..131803815,+#_4cd8fbb066a8e6d41cef4c3ada40aae6p@chr7:131803806..131803815, +
6.39e-53FFCP PHASE2:Hg19::chr7:131803806..131803815,+#_4cd8fbb066a8e6d41cef4c3ada40aae6p@chr7:131803806..131803815, +
1.14e-50FFCP PHASE1:Hg19::chr1:29586692..29586705,+#_5ef274b66e8bdcc20e8f43561962cf1ep7@PTPRU
1.14e-50FFCP PHASE2:Hg19::chr1:29586692..29586705,+#_5ef274b66e8bdcc20e8f43561962cf1ep7@PTPRU
1.89e-50FFCP PHASE2:Hg19::chr13:94028319..94028321,+#_96950bf87b6ab251f734d8a4497c094fp@chr13:94028319..94028321, +
1.89e-50FFCP PHASE1:Hg19::chr13:94028319..94028321,+#_96950bf87b6ab251f734d8a4497c094fp@chr13:94028319..94028321, +
4.05e-47FFCP PHASE2:Hg19::chr10:103990396..103990405,+#_9abfa153340c79102f5a48da8a1378c3p@chr10:103990396..103990405, +
4.05e-47FFCP PHASE2:Hg19::chr2:66670833..66670853,+#_9abfa153340c79102f5a48da8a1378c3p@chr2:66670833..66670853, +
4.05e-47FFCP PHASE1:Hg19::chr10:103990396..103990405,+#_9abfa153340c79102f5a48da8a1378c3p@chr10:103990396..103990405, +
4.05e-47FFCP PHASE2:Hg19::chr11:2973356..2973367,-#_9abfa153340c79102f5a48da8a1378c3p11@NAP1L4
4.05e-47FFCP PHASE1:Hg19::chr11:2973356..2973367,-#_9abfa153340c79102f5a48da8a1378c3p11@NAP1L4
4.05e-47FFCP PHASE1:Hg19::chr2:66670833..66670853,+#_9abfa153340c79102f5a48da8a1378c3p@chr2:66670833..66670853, +
8.84e-47FFCP PHASE1:Hg19::chrX:106146562..106146577,-#_8ae8a18d2fcba47aa50fd68532136fcep1@RIPPLY1
8.84e-47FFCP PHASE2:Hg19::chrX:106146562..106146577,-#_8ae8a18d2fcba47aa50fd68532136fcep1@RIPPLY1
8.84e-47FFCP PHASE1:Hg19::chr14:60975644..60975673,+#_8ae8a18d2fcba47aa50fd68532136fcep3@SIX6
8.84e-47FFCP PHASE2:Hg19::chr14:60975644..60975673,+#_8ae8a18d2fcba47aa50fd68532136fcep3@SIX6
1.21e-46FFCP PHASE2:Hg19::chr14:60975871..60975880,+#_2e0fb25cac57355d5a690c15348f5aeap4@SIX6
1.21e-46FFCP PHASE1:Hg19::chr1:203463245..203463294,+#_2e0fb25cac57355d5a690c15348f5aeap1@OPTC
1.21e-46FFCP PHASE2:Hg19::chr1:203463245..203463294,+#_2e0fb25cac57355d5a690c15348f5aeap1@OPTC
1.21e-46FFCP PHASE1:Hg19::chr14:60975871..60975880,+#_2e0fb25cac57355d5a690c15348f5aeap4@SIX6
4.17e-46FFCP PHASE2:Hg19::chr13:36050976..36050990,+#_deb8b53a8bf2d9215198a0d859fb9255p8@NBEA
4.17e-46FFCP PHASE1:Hg19::chr13:36050976..36050990,+#_deb8b53a8bf2d9215198a0d859fb9255p8@NBEA

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