CL:0000075: Difference between revisions
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|name=columnar/cuboidal epithelial cell
|namespace=cell
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|is_a=CL:0000066;;CL:0002371
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Latest revision as of 16:29, 12 September 2014
Name: | columnar/cuboidal epithelial cell |
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Namespace: | FANTOM |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000066(epithelial cell),CL:0002371(somatic cell) |
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Children
is a: | CL:0000067 (ciliated epithelial cell),CL:0000239 (brush border epithelial cell),CL:0000710 (neurecto-epithelial cell),CL:0002224 (lens epithelial cell) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10647-109A8 (lens epithelial cell line:SRA 01/04)
- 10691-109F7 (meningioma cell line:HKBMM)
- 11242-116D9 (Ciliary Epithelial Cells, donor1)
- 11274-116H5 (Melanocyte - light, donor1)
- 11323-117D9 (Ciliary Epithelial Cells, donor2)
- 11351-117H1 (Melanocyte - light, donor2)
- 11399-118D4 (Ciliary Epithelial Cells, donor3)
- 11423-118G1 (Melanocyte - light, donor3)
- 11502-119F8 (Melanocyte - dark, donor1)
- 11515-119H3 (Renal Proximal Tubular Epithelial Cell, donor1)
... further results Mouse (Mus musculus)
- 10647-109A8 (lens epithelial cell line:SRA 01/04)
- 10691-109F7 (meningioma cell line:HKBMM)
- 11242-116D9 (Ciliary Epithelial Cells, donor1)
- 11274-116H5 (Melanocyte - light, donor1)
- 11323-117D9 (Ciliary Epithelial Cells, donor2)
- 11351-117H1 (Melanocyte - light, donor2)
- 11399-118D4 (Ciliary Epithelial Cells, donor3)
- 11423-118G1 (Melanocyte - light, donor3)
- 11502-119F8 (Melanocyte - dark, donor1)
- 11515-119H3 (Renal Proximal Tubular Epithelial Cell, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000075 (columnar/cuboidal epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data