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{{CL
{{CL
|id=CL:0000172
|alt_id=
|name=somatostatin secreting cell
|namespace=cell
|def=
|xref=
|is_a=CL:0000167
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0000172
|is_a=CL:0000167
|is_obsolete=
|located_in=
|located_in=
|name=somatostatin secreting cell
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=
}}
}}

Latest revision as of 16:31, 12 September 2014

Name:somatostatin secreting cell
Namespace:FANTOM


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000167(peptide hormone secreting cell)



Children


is a:CL:0000502 (type D enteroendocrine cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000172 (somatostatin secreting cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE1:Hg19::chr18:56815879..56815901,+#_2a80936e10cd955145742928aa12a188p@chr18:56815879..56815901, +
5.42e-195FFCP PHASE2:Hg19::chr18:56815879..56815901,+#_2a80936e10cd955145742928aa12a188p@chr18:56815879..56815901, +
5.42e-195FFCP PHASE1:Hg19::chr1:193232079..193232084,+#_2a80936e10cd955145742928aa12a188p@chr1:193232079..193232084, +
5.42e-195FFCP PHASE2:Hg19::chr6:50692244..50692251,+#_2a80936e10cd955145742928aa12a188p@chr6:50692244..50692251, +
5.42e-195FFCP PHASE2:Hg19::chr1:193232144..193232147,+#_2a80936e10cd955145742928aa12a188p@chr1:193232144..193232147, +
5.42e-195FFCP PHASE2:Hg19::chr10:120200137..120200154,+#_2a80936e10cd955145742928aa12a188p@chr10:120200137..120200154, +
5.42e-195FFCP PHASE2:Hg19::chr1:193186161..193186169,-#_2a80936e10cd955145742928aa12a188p@chr1:193186161..193186169, -
5.42e-195FFCP PHASE1:Hg19::chr10:120200137..120200154,+#_2a80936e10cd955145742928aa12a188p@chr10:120200137..120200154, +
5.42e-195FFCP PHASE2:Hg19::chr9:96678236..96678246,-#_2a80936e10cd955145742928aa12a188p@chr9:96678236..96678246, -
5.42e-195FFCP PHASE2:Hg19::chr20:20173664..20173680,+#_2a80936e10cd955145742928aa12a188p@chr20:20173664..20173680, +
5.42e-195FFCP PHASE2:Hg19::chr9:77257468..77257474,-#_2a80936e10cd955145742928aa12a188p@chr9:77257468..77257474, -
5.42e-195FFCP PHASE1:Hg19::chr6:50692244..50692251,+#_2a80936e10cd955145742928aa12a188p@chr6:50692244..50692251, +
5.42e-195FFCP PHASE1:Hg19::chr1:193232144..193232147,+#_2a80936e10cd955145742928aa12a188p@chr1:193232144..193232147, +
5.42e-195FFCP PHASE1:Hg19::chr20:20173664..20173680,+#_2a80936e10cd955145742928aa12a188p@chr20:20173664..20173680, +
5.42e-195FFCP PHASE1:Hg19::chr9:96678236..96678246,-#_2a80936e10cd955145742928aa12a188p@chr9:96678236..96678246, -
5.42e-195FFCP PHASE1:Hg19::chr1:193186161..193186169,-#_2a80936e10cd955145742928aa12a188p@chr1:193186161..193186169, -
5.42e-195FFCP PHASE2:Hg19::chr1:193232079..193232084,+#_2a80936e10cd955145742928aa12a188p@chr1:193232079..193232084, +
5.42e-195FFCP PHASE1:Hg19::chr9:77257468..77257474,-#_2a80936e10cd955145742928aa12a188p@chr9:77257468..77257474, -
5.42e-195FFCP PHASE2:Hg19::chr12:70464665..70464668,+#_2a80936e10cd955145742928aa12a188p@chr12:70464665..70464668, +
5.42e-195FFCP PHASE1:Hg19::chr12:70464665..70464668,+#_2a80936e10cd955145742928aa12a188p@chr12:70464665..70464668, +
9.37e-99FFCP PHASE2:Hg19::chr1:193232096..193232117,+#_4cf960253c8b9612a166f61de7f9c3efp@chr1:193232096..193232117, +
9.37e-99FFCP PHASE2:Hg19::chr12:70464675..70464680,+#_4cf960253c8b9612a166f61de7f9c3efp@chr12:70464675..70464680, +
9.37e-99FFCP PHASE1:Hg19::chr12:70464675..70464680,+#_4cf960253c8b9612a166f61de7f9c3efp@chr12:70464675..70464680, +
9.37e-99FFCP PHASE1:Hg19::chr4:139208173..139208199,-#_4cf960253c8b9612a166f61de7f9c3efp@chr4:139208173..139208199, -
9.37e-99FFCP PHASE1:Hg19::chr18:7955271..7955280,+#_4cf960253c8b9612a166f61de7f9c3efp@chr18:7955271..7955280, +
9.37e-99FFCP PHASE2:Hg19::chr18:7955271..7955280,+#_4cf960253c8b9612a166f61de7f9c3efp@chr18:7955271..7955280, +
9.37e-99FFCP PHASE2:Hg19::chr6:154858221..154858224,-#_4cf960253c8b9612a166f61de7f9c3efp@chr6:154858221..154858224, -
9.37e-99FFCP PHASE2:Hg19::chr4:173014804..173014812,+#_4cf960253c8b9612a166f61de7f9c3efp@chr4:173014804..173014812, +
9.37e-99FFCP PHASE2:Hg19::chr9:77257424..77257435,-#_4cf960253c8b9612a166f61de7f9c3efp@chr9:77257424..77257435, -
9.37e-99FFCP PHASE2:Hg19::chr6:161970049..161970057,-#_4cf960253c8b9612a166f61de7f9c3efp3@GU361471
9.37e-99FFCP PHASE1:Hg19::chr1:193232096..193232117,+#_4cf960253c8b9612a166f61de7f9c3efp@chr1:193232096..193232117, +
9.37e-99FFCP PHASE2:Hg19::chr12:70464593..70464598,+#_4cf960253c8b9612a166f61de7f9c3efp@chr12:70464593..70464598, +
9.37e-99FFCP PHASE1:Hg19::chr12:70464593..70464598,+#_4cf960253c8b9612a166f61de7f9c3efp@chr12:70464593..70464598, +
9.37e-99FFCP PHASE1:Hg19::chr6:154858221..154858224,-#_4cf960253c8b9612a166f61de7f9c3efp@chr6:154858221..154858224, -
9.37e-99FFCP PHASE1:Hg19::chr4:173014804..173014812,+#_4cf960253c8b9612a166f61de7f9c3efp@chr4:173014804..173014812, +
9.37e-99FFCP PHASE2:Hg19::chr6:154858237..154858245,-#_4cf960253c8b9612a166f61de7f9c3efp@chr6:154858237..154858245, -
9.37e-99FFCP PHASE2:Hg19::chr1:193186195..193186210,-#_4cf960253c8b9612a166f61de7f9c3efp@chr1:193186195..193186210, -
9.37e-99FFCP PHASE1:Hg19::chr9:77257424..77257435,-#_4cf960253c8b9612a166f61de7f9c3efp@chr9:77257424..77257435, -
9.37e-99FFCP PHASE1:Hg19::chr6:161970049..161970057,-#_4cf960253c8b9612a166f61de7f9c3efp3@GU361471
9.37e-99FFCP PHASE2:Hg19::chr4:59982412..59982425,+#_4cf960253c8b9612a166f61de7f9c3efp@chr4:59982412..59982425, +
9.37e-99FFCP PHASE1:Hg19::chr6:154858237..154858245,-#_4cf960253c8b9612a166f61de7f9c3efp@chr6:154858237..154858245, -
9.37e-99FFCP PHASE1:Hg19::chr4:59982412..59982425,+#_4cf960253c8b9612a166f61de7f9c3efp@chr4:59982412..59982425, +
9.37e-99FFCP PHASE2:Hg19::chr18:56813724..56813731,+#_4cf960253c8b9612a166f61de7f9c3efp@chr18:56813724..56813731, +
9.37e-99FFCP PHASE1:Hg19::chr1:193186195..193186210,-#_4cf960253c8b9612a166f61de7f9c3efp@chr1:193186195..193186210, -
9.37e-99FFCP PHASE1:Hg19::chr18:56813724..56813731,+#_4cf960253c8b9612a166f61de7f9c3efp@chr18:56813724..56813731, +
9.37e-99FFCP PHASE2:Hg19::chr4:139208173..139208199,-#_4cf960253c8b9612a166f61de7f9c3efp@chr4:139208173..139208199, -
2.55e-98FFCP PHASE2:Hg19::chr1:110661599..110661609,-#_3959f4b075e59bc1f915dfa09ba633adp@chr1:110661599..110661609, -
2.55e-98FFCP PHASE1:Hg19::chr6:132980338..132980346,-#_3959f4b075e59bc1f915dfa09ba633adp@chr6:132980338..132980346, -
2.55e-98FFCP PHASE1:Hg19::chr1:110661599..110661609,-#_3959f4b075e59bc1f915dfa09ba633adp@chr1:110661599..110661609, -
2.55e-98FFCP PHASE1:Hg19::chr18:56816249..56816258,+#_3959f4b075e59bc1f915dfa09ba633adp@chr18:56816249..56816258, +
2.55e-98FFCP PHASE2:Hg19::chr18:56816249..56816258,+#_3959f4b075e59bc1f915dfa09ba633adp@chr18:56816249..56816258, +
2.55e-98FFCP PHASE2:Hg19::chr6:154858334..154858342,-#_3959f4b075e59bc1f915dfa09ba633adp@chr6:154858334..154858342, -
2.55e-98FFCP PHASE2:Hg19::chr13:93508642..93508652,-#_3959f4b075e59bc1f915dfa09ba633adp@chr13:93508642..93508652, -
2.55e-98FFCP PHASE1:Hg19::chr13:93508642..93508652,-#_3959f4b075e59bc1f915dfa09ba633adp@chr13:93508642..93508652, -
2.55e-98FFCP PHASE2:Hg19::chr6:132980338..132980346,-#_3959f4b075e59bc1f915dfa09ba633adp@chr6:132980338..132980346, -
2.55e-98FFCP PHASE1:Hg19::chr6:154858334..154858342,-#_3959f4b075e59bc1f915dfa09ba633adp@chr6:154858334..154858342, -
1.23e-66FFCP PHASE2:Hg19::chr9:77257683..77257703,+#_d047f695995af9a054327dcdf97fc2a3p@chr9:77257683..77257703, +
1.23e-66FFCP PHASE1:Hg19::chr19:7570269..7570273,+#_d047f695995af9a054327dcdf97fc2a3p13@C19orf45
1.23e-66FFCP PHASE2:Hg19::chr1:110678110..110678115,+#_d047f695995af9a054327dcdf97fc2a3p@chr1:110678110..110678115, +
1.23e-66FFCP PHASE1:Hg19::chr9:77257683..77257703,+#_d047f695995af9a054327dcdf97fc2a3p@chr9:77257683..77257703, +
1.23e-66FFCP PHASE1:Hg19::chr18:56815158..56815162,+#_d047f695995af9a054327dcdf97fc2a3p@chr18:56815158..56815162, +
1.23e-66FFCP PHASE2:Hg19::chr18:56815158..56815162,+#_d047f695995af9a054327dcdf97fc2a3p@chr18:56815158..56815162, +
1.23e-66FFCP PHASE2:Hg19::chr12:128108552..128108561,+#_d047f695995af9a054327dcdf97fc2a3p1@ENST00000537470
1.23e-66FFCP PHASE1:Hg19::chr12:128108552..128108561,+#_d047f695995af9a054327dcdf97fc2a3p1@ENST00000537470
1.23e-66FFCP PHASE1:Hg19::chr1:110678110..110678115,+#_d047f695995af9a054327dcdf97fc2a3p@chr1:110678110..110678115, +
1.23e-66FFCP PHASE1:Hg19::chr12:127385138..127385144,-#_d047f695995af9a054327dcdf97fc2a3p@chr12:127385138..127385144, -
1.23e-66FFCP PHASE2:Hg19::chr12:127385138..127385144,-#_d047f695995af9a054327dcdf97fc2a3p@chr12:127385138..127385144, -
1.23e-66FFCP PHASE1:Hg19::chr18:7955176..7955183,+#_d047f695995af9a054327dcdf97fc2a3p@chr18:7955176..7955183, +
1.23e-66FFCP PHASE2:Hg19::chr18:7955176..7955183,+#_d047f695995af9a054327dcdf97fc2a3p@chr18:7955176..7955183, +
1.23e-66FFCP PHASE2:Hg19::chr12:70464652..70464662,+#_d047f695995af9a054327dcdf97fc2a3p@chr12:70464652..70464662, +
1.23e-66FFCP PHASE1:Hg19::chr12:70464652..70464662,+#_d047f695995af9a054327dcdf97fc2a3p@chr12:70464652..70464662, +
1.23e-66FFCP PHASE2:Hg19::chr1:110678228..110678236,+#_d047f695995af9a054327dcdf97fc2a3p@chr1:110678228..110678236, +
1.23e-66FFCP PHASE1:Hg19::chr1:110678228..110678236,+#_d047f695995af9a054327dcdf97fc2a3p@chr1:110678228..110678236, +
1.23e-66FFCP PHASE2:Hg19::chr19:7570269..7570273,+#_d047f695995af9a054327dcdf97fc2a3p13@C19orf45
2.39e-66FFCP PHASE2:Hg19::chr13:93587956..93587973,+#_02f114d6b3d434f5bd47254839f8f9f6p@chr13:93587956..93587973, +
2.39e-66FFCP PHASE1:Hg19::chr13:93587956..93587973,+#_02f114d6b3d434f5bd47254839f8f9f6p@chr13:93587956..93587973, +
2.39e-66FFCP PHASE2:Hg19::chr15:92459318..92459327,+#_02f114d6b3d434f5bd47254839f8f9f6p@chr15:92459318..92459327, +
2.39e-66FFCP PHASE2:Hg19::chr12:128077388..128077416,+#_02f114d6b3d434f5bd47254839f8f9f6p@chr12:128077388..128077416, +
2.39e-66FFCP PHASE1:Hg19::chr12:128077388..128077416,+#_02f114d6b3d434f5bd47254839f8f9f6p@chr12:128077388..128077416, +
2.39e-66FFCP PHASE1:Hg19::chr1:165198157..165198181,-#_02f114d6b3d434f5bd47254839f8f9f6p@chr1:165198157..165198181, -
2.39e-66FFCP PHASE1:Hg19::chr15:92459318..92459327,+#_02f114d6b3d434f5bd47254839f8f9f6p@chr15:92459318..92459327, +
2.39e-66FFCP PHASE1:Hg19::chr7:120381641..120381650,+#_02f114d6b3d434f5bd47254839f8f9f6p@chr7:120381641..120381650, +
2.39e-66FFCP PHASE1:Hg19::chr18:56816267..56816276,+#_02f114d6b3d434f5bd47254839f8f9f6p@chr18:56816267..56816276, +
2.39e-66FFCP PHASE2:Hg19::chr18:56816267..56816276,+#_02f114d6b3d434f5bd47254839f8f9f6p@chr18:56816267..56816276, +
2.39e-66FFCP PHASE2:Hg19::chr2:159855059..159855068,-#_02f114d6b3d434f5bd47254839f8f9f6p@chr2:159855059..159855068, -
2.39e-66FFCP PHASE2:Hg19::chr4:3310694..3310716,-#_02f114d6b3d434f5bd47254839f8f9f6p@chr4:3310694..3310716, -
2.39e-66FFCP PHASE2:Hg19::chr5:77683792..77683799,+#_02f114d6b3d434f5bd47254839f8f9f6p@chr5:77683792..77683799, +
2.39e-66FFCP PHASE2:Hg19::chr5:104246731..104246738,-#_02f114d6b3d434f5bd47254839f8f9f6p3@ENST00000524336
2.39e-66FFCP PHASE1:Hg19::chr2:159855059..159855068,-#_02f114d6b3d434f5bd47254839f8f9f6p@chr2:159855059..159855068, -
2.39e-66FFCP PHASE2:Hg19::chr1:165198157..165198181,-#_02f114d6b3d434f5bd47254839f8f9f6p@chr1:165198157..165198181, -
2.39e-66FFCP PHASE1:Hg19::chr4:3310694..3310716,-#_02f114d6b3d434f5bd47254839f8f9f6p@chr4:3310694..3310716, -
2.39e-66FFCP PHASE1:Hg19::chr5:77683792..77683799,+#_02f114d6b3d434f5bd47254839f8f9f6p@chr5:77683792..77683799, +
2.39e-66FFCP PHASE2:Hg19::chr7:120381641..120381650,+#_02f114d6b3d434f5bd47254839f8f9f6p@chr7:120381641..120381650, +
2.39e-66FFCP PHASE1:Hg19::chr5:104246731..104246738,-#_02f114d6b3d434f5bd47254839f8f9f6p3@ENST00000524336
4.66e-66FFCP PHASE2:Hg19::chr19:51412411..51412426,-#_f9b5199ff33c1f786ecd1fb00ed70209p4@KLK4
4.66e-66FFCP PHASE2:Hg19::chr7:100807523..100807543,+#_f9b5199ff33c1f786ecd1fb00ed70209p@chr7:100807523..100807543, +
4.66e-66FFCP PHASE2:Hg19::chr20:11077086..11077098,+#_f9b5199ff33c1f786ecd1fb00ed70209p@chr20:11077086..11077098, +
4.66e-66FFCP PHASE1:Hg19::chr19:51412411..51412426,-#_f9b5199ff33c1f786ecd1fb00ed70209p4@KLK4
4.66e-66FFCP PHASE1:Hg19::chr20:11077086..11077098,+#_f9b5199ff33c1f786ecd1fb00ed70209p@chr20:11077086..11077098, +
4.66e-66FFCP PHASE2:Hg19::chr14:101165430..101165451,-#_f9b5199ff33c1f786ecd1fb00ed70209p@chr14:101165430..101165451, -

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