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(Created page with "{{CL |id=CL:0000388 |name=tendon cell |namespace=cell |def="A fibrocyte that is part of a tendon." [GOC:tfm] |xref= |is_a=CL:0000135;;CL:0000386 |synonym="muscle attach...")
 
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{{CL
{{CL
|id=CL:0000388
|alt_id=
|name=tendon cell
|namespace=cell
|def="A fibrocyte that is part of a tendon." [GOC:tfm]
|xref=
|is_a=CL:0000135;;CL:0000386
|synonym="muscle attachment cell" EXACT [];;"tenocyte" RELATED []
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A fibrocyte that is part of a tendon." [GOC:tfm]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0000388
|is_a=CL:0000135 ;;CL:0000386
|is_obsolete=
|located_in=
|located_in=
|name=tendon cell
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0000043
|part_of=UBERON:0000043
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl
|subset=
|synonym="muscle attachment cell" EXACT [];;"tenocyte" RELATED []
|union_of=
|xref=
}}
}}

Latest revision as of 16:33, 12 September 2014

Name:tendon cell
Namespace:FANTOM
Definition:"A fibrocyte that is part of a tendon." [GOC:tfm]
Synonyms: "muscle attachment cell" EXACT []
"tenocyte" RELATED []


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000135(fibrocyte),CL:0000386(attachment cell)
part_of:UBERON:0000043(tendon)



Children


derives from:FF:0000280 (human tenocyte sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000388 (tendon cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
9.74e-88FFCP PHASE2:Hg19::chr1:203150041..203150049,-#_5f8b537c0585845cbdc812be3add9d74p@chr1:203150041..203150049, -
9.74e-88FFCP PHASE1:Hg19::chr1:203150041..203150049,-#_5f8b537c0585845cbdc812be3add9d74p@chr1:203150041..203150049, -
2.75e-74FFCP PHASE1:Hg19::chr5:79375755..79375801,+#_f16b4f12867d2706ddf0ef6805d35690p@chr5:79375755..79375801, +
2.75e-74FFCP PHASE2:Hg19::chr5:79375755..79375801,+#_f16b4f12867d2706ddf0ef6805d35690p@chr5:79375755..79375801, +
2.39e-66FFCP PHASE2:Hg19::chr7:43016260..43016261,+#_416cd40319ede1950fe78a3701f4e90ap@chr7:43016260..43016261, +
2.39e-66FFCP PHASE2:Hg19::chr11:27541356..27541360,+#_416cd40319ede1950fe78a3701f4e90ap@chr11:27541356..27541360, +
2.39e-66FFCP PHASE2:Hg19::chr4:4396380..4396381,-#_416cd40319ede1950fe78a3701f4e90ap@chr4:4396380..4396381, -
2.39e-66FFCP PHASE1:Hg19::chr11:27541356..27541360,+#_416cd40319ede1950fe78a3701f4e90ap@chr11:27541356..27541360, +
2.39e-66FFCP PHASE1:Hg19::chr7:43016260..43016261,+#_416cd40319ede1950fe78a3701f4e90ap@chr7:43016260..43016261, +
2.39e-66FFCP PHASE1:Hg19::chr4:4396380..4396381,-#_416cd40319ede1950fe78a3701f4e90ap@chr4:4396380..4396381, -
2.4e-66FFCP PHASE2:Hg19::chr1:203150031..203150040,-#_486d0f279995247921537aa1ba49b58fp@chr1:203150031..203150040, -
2.4e-66FFCP PHASE1:Hg19::chr1:203150031..203150040,-#_486d0f279995247921537aa1ba49b58fp@chr1:203150031..203150040, -
2.41e-66FFCP PHASE1:Hg19::chr8:120608233..120608244,-#_9833d4574a845f26249f68770e7dd98fp@chr8:120608233..120608244, -
2.41e-66FFCP PHASE2:Hg19::chr8:120608233..120608244,-#_9833d4574a845f26249f68770e7dd98fp@chr8:120608233..120608244, -
1.22e-59FFCP PHASE1:Hg19::chr7:80373118..80373135,-#_8702b3bad7b1c00768e209acf17be16cp21@SEMA3C
1.22e-59FFCP PHASE2:Hg19::chr7:80373118..80373135,-#_8702b3bad7b1c00768e209acf17be16cp21@SEMA3C
3.13e-54FFCP PHASE2:Hg19::chr8:57353995..57354004,-#_c7600796296233c863bcf7cfe23ef1dcp@chr8:57353995..57354004, -
3.13e-54FFCP PHASE1:Hg19::chr8:57353995..57354004,-#_c7600796296233c863bcf7cfe23ef1dcp@chr8:57353995..57354004, -
9.77e-45FFCP PHASE1:Hg19::chr6:159660765..159660776,+#_08abfae507bce27b592a8e4297b862e7p@chr6:159660765..159660776, +
9.77e-45FFCP PHASE2:Hg19::chr6:159660765..159660776,+#_08abfae507bce27b592a8e4297b862e7p@chr6:159660765..159660776, +
6.64e-41FFCP PHASE2:Hg19::chr1:56962127..56962135,-#_bc58a04f5d306958918f98ea99605d17p@chr1:56962127..56962135, -
6.64e-41FFCP PHASE1:Hg19::chr1:56962127..56962135,-#_bc58a04f5d306958918f98ea99605d17p@chr1:56962127..56962135, -
2.93e-40FFCP PHASE2:Hg19::chr4:26492048..26492059,-#_a283a2f1e1bf7edc955af79a82c7113ap3@CCKAR
2.93e-40FFCP PHASE1:Hg19::chr4:26492048..26492059,-#_a283a2f1e1bf7edc955af79a82c7113ap3@CCKAR
9.77e-40FFCP PHASE1:Hg19::chr8:57354119..57354137,+#_f994462559eedaf2b42e86d784cc5bb5p@chr8:57354119..57354137, +
9.77e-40FFCP PHASE2:Hg19::chr8:57354119..57354137,+#_f994462559eedaf2b42e86d784cc5bb5p@chr8:57354119..57354137, +
1.46e-39FFCP PHASE2:Hg19::chr19:18895742..18895757,-#_67bf2abf83c17d5230567a6bf0abb1ddp@chr19:18895742..18895757, -
1.46e-39FFCP PHASE1:Hg19::chr19:18895742..18895757,-#_67bf2abf83c17d5230567a6bf0abb1ddp@chr19:18895742..18895757, -
6.91e-39FFCP PHASE2:Hg19::chr7:15725581..15725587,-#_0cab25a6f97f9119c300eae505c251d7p13@MEOX2
6.91e-39FFCP PHASE1:Hg19::chr7:15725581..15725587,-#_0cab25a6f97f9119c300eae505c251d7p13@MEOX2
8.37e-39FFCP PHASE1:Hg19::chr1:203149809..203149816,-#_5f038ef817d2904e291eb64d5d3302a4p@chr1:203149809..203149816, -
8.37e-39FFCP PHASE2:Hg19::chr1:203149809..203149816,-#_5f038ef817d2904e291eb64d5d3302a4p@chr1:203149809..203149816, -
1.01e-38FFCP PHASE2:Hg19::chr1:203152872..203152879,-#_b0e94809cc5322fa9a91b825d366fa66p@chr1:203152872..203152879, -
1.01e-38FFCP PHASE1:Hg19::chr1:203152872..203152879,-#_b0e94809cc5322fa9a91b825d366fa66p@chr1:203152872..203152879, -
3.19e-38FFCP PHASE1:Hg19::chr18:61495529..61495546,+#_ad2ecfca33c1330229003dcf58678760p@chr18:61495529..61495546, +
3.19e-38FFCP PHASE2:Hg19::chr18:61495529..61495546,+#_ad2ecfca33c1330229003dcf58678760p@chr18:61495529..61495546, +
8.41e-38FFCP PHASE1:Hg19::chr8:110346720..110346722,-#_b2ae05317eac90e4f857851d67a22b82p5@NUDCD1
8.41e-38FFCP PHASE2:Hg19::chr8:110346720..110346722,-#_b2ae05317eac90e4f857851d67a22b82p5@NUDCD1
2.95e-37FFCP PHASE1:Hg19::chr10:28033776..28033788,+#_06900db17519bbb076ddc00c454e3005p1@ENST00000419777
2.95e-37FFCP PHASE2:Hg19::chr10:28033776..28033788,+#_06900db17519bbb076ddc00c454e3005p1@ENST00000419777
1.39e-34FFCP PHASE1:Hg19::chr1:203148394..203148401,-#_52f1de261187ee9ad2272cedd9d7aec0p10@CHI3L1
1.39e-34FFCP PHASE2:Hg19::chr1:203148394..203148401,-#_52f1de261187ee9ad2272cedd9d7aec0p10@CHI3L1
2.19e-34FFCP PHASE2:Hg19::chr12:91502776..91502785,-#_96b5185da7bacde75235d111a0f98531p15@LUM
2.19e-34FFCP PHASE2:Hg19::chr7:87906696..87906704,-#_96b5185da7bacde75235d111a0f98531p@chr7:87906696..87906704, -
2.19e-34FFCP PHASE1:Hg19::chr12:91502776..91502785,-#_96b5185da7bacde75235d111a0f98531p15@LUM
2.19e-34FFCP PHASE1:Hg19::chr7:87906696..87906704,-#_96b5185da7bacde75235d111a0f98531p@chr7:87906696..87906704, -
4.27e-34FFCP PHASE1:Hg19::chr1:203153416..203153419,-#_6d5e787117e9d1ddc6b32a4321ce2cf8p@chr1:203153416..203153419, -
4.27e-34FFCP PHASE2:Hg19::chr1:203153416..203153419,-#_6d5e787117e9d1ddc6b32a4321ce2cf8p@chr1:203153416..203153419, -
5.96e-34FFCP PHASE1:Hg19::chr1:110471879..110471901,+#_9347bbecad28762d8eecec8f04b12b2bp@chr1:110471879..110471901, +
5.96e-34FFCP PHASE2:Hg19::chr10:127350469..127350475,-#_9347bbecad28762d8eecec8f04b12b2bp@chr10:127350469..127350475, -
5.96e-34FFCP PHASE1:Hg19::chr10:127350469..127350475,-#_9347bbecad28762d8eecec8f04b12b2bp@chr10:127350469..127350475, -
5.96e-34FFCP PHASE2:Hg19::chr1:110471879..110471901,+#_9347bbecad28762d8eecec8f04b12b2bp@chr1:110471879..110471901, +
8.46e-34FFCP PHASE2:Hg19::chr1:56320708..56320728,-#_a735108a65efa3074bf15ca64ad71212p@chr1:56320708..56320728, -
8.46e-34FFCP PHASE1:Hg19::chr1:56320708..56320728,-#_a735108a65efa3074bf15ca64ad71212p@chr1:56320708..56320728, -
9.1e-34FFCP PHASE2:Hg19::chr8:57354463..57354473,+#_2ceac966dc6c153ec76fe4a2ab884dbcp@chr8:57354463..57354473, +
9.1e-34FFCP PHASE1:Hg19::chr8:57354463..57354473,+#_2ceac966dc6c153ec76fe4a2ab884dbcp@chr8:57354463..57354473, +
2.31e-33FFCP PHASE1:Hg19::chr18:43418712..43418734,+#_024787a1f2e77e9980fd124682d10163p7@SIGLEC15
2.31e-33FFCP PHASE2:Hg19::chr18:43418712..43418734,+#_024787a1f2e77e9980fd124682d10163p7@SIGLEC15
7.76e-32FFCP PHASE2:Hg19::chr19:18899448..18899459,-#_181ccf990273ff05f63848b15342f44cp@chr19:18899448..18899459, -
7.76e-32FFCP PHASE1:Hg19::chr19:18899448..18899459,-#_181ccf990273ff05f63848b15342f44cp@chr19:18899448..18899459, -
1.32e-31FFCP PHASE1:Hg19::chr3:100494130..100494141,-#_9a1c68885d3ff9df34b7d5d979754e55p@chr3:100494130..100494141, -
1.32e-31FFCP PHASE2:Hg19::chr3:100494130..100494141,-#_9a1c68885d3ff9df34b7d5d979754e55p@chr3:100494130..100494141, -
9.03e-31FFCP PHASE1:Hg19::chr19:18900031..18900054,+#_7fb3ee76b6c152f55a881d1584b42636p@chr19:18900031..18900054, +
9.03e-31FFCP PHASE2:Hg19::chr19:18900031..18900054,+#_7fb3ee76b6c152f55a881d1584b42636p@chr19:18900031..18900054, +
1.09e-30FFCP PHASE2:Hg19::chr1:161969956..161969963,-#_d027ccafbae6243e8480248af0a27404p@chr1:161969956..161969963, -
1.09e-30FFCP PHASE1:Hg19::chr1:161969956..161969963,-#_d027ccafbae6243e8480248af0a27404p@chr1:161969956..161969963, -
2.48e-30FFCP PHASE2:Hg19::chr19:18896512..18896527,-#_5c6ea59bee07b58e72e796e29e416666p@chr19:18896512..18896527, -
2.48e-30FFCP PHASE1:Hg19::chr19:18896512..18896527,-#_5c6ea59bee07b58e72e796e29e416666p@chr19:18896512..18896527, -
2.67e-30FFCP PHASE2:Hg19::chr5:79351765..79351792,+#_3443cd7826f04acf2896bb5daf7c5ad0p@chr5:79351765..79351792, +
2.67e-30FFCP PHASE1:Hg19::chr5:79351765..79351792,+#_3443cd7826f04acf2896bb5daf7c5ad0p@chr5:79351765..79351792, +
5.0e-30FFCP PHASE2:Hg19::chr20:48140767..48140776,-#_8006bee33879ab27b93250ed65f0bf5dp@chr20:48140767..48140776, -
5.0e-30FFCP PHASE1:Hg19::chr20:48140767..48140776,-#_8006bee33879ab27b93250ed65f0bf5dp@chr20:48140767..48140776, -
2.91e-29FFCP PHASE1:Hg19::chr19:18895812..18895830,-#_b7bc04f8786d959b79df9af1c2e7832ep@chr19:18895812..18895830, -
2.91e-29FFCP PHASE2:Hg19::chr19:18895812..18895830,-#_b7bc04f8786d959b79df9af1c2e7832ep@chr19:18895812..18895830, -
5.18e-29FFCP PHASE1:Hg19::chr15:81243109..81243120,+#_5677e20825e2c263310ec3295ca9ce81p@chr15:81243109..81243120, +
5.18e-29FFCP PHASE2:Hg19::chr15:81243109..81243120,+#_5677e20825e2c263310ec3295ca9ce81p@chr15:81243109..81243120, +
1.11e-28FFCP PHASE2:Hg19::chr19:18896642..18896656,-#_85b885c8c50a84d10f202ee53909a092p@chr19:18896642..18896656, -
1.11e-28FFCP PHASE1:Hg19::chr19:18896642..18896656,-#_85b885c8c50a84d10f202ee53909a092p@chr19:18896642..18896656, -
1.42e-28FFCP PHASE1:Hg19::chr1:56977818..56977827,-#_5956af04361df2ea570b802aab222b85p@chr1:56977818..56977827, -
1.42e-28FFCP PHASE2:Hg19::chr1:56977818..56977827,-#_5956af04361df2ea570b802aab222b85p@chr1:56977818..56977827, -
2.06e-28FFCP PHASE2:Hg19::chr17:38613300..38613311,-#_47f4a6885d7ed499979936eb1d335f71p@chr17:38613300..38613311, -
2.06e-28FFCP PHASE1:Hg19::chr17:38613300..38613311,-#_47f4a6885d7ed499979936eb1d335f71p@chr17:38613300..38613311, -
3.59e-28FFCP PHASE2:Hg19::chr3:69154031..69154043,+#_e11e6e3866a7f3085a92daef3b1f0055p@chr3:69154031..69154043, +
3.59e-28FFCP PHASE1:Hg19::chr1:203148495..203148505,-#_e11e6e3866a7f3085a92daef3b1f0055p13@CHI3L1
3.59e-28FFCP PHASE1:Hg19::chr3:69154031..69154043,+#_e11e6e3866a7f3085a92daef3b1f0055p@chr3:69154031..69154043, +
3.59e-28FFCP PHASE2:Hg19::chr1:203148495..203148505,-#_e11e6e3866a7f3085a92daef3b1f0055p13@CHI3L1
6.24e-28FFCP PHASE2:Hg19::chr8:57354275..57354292,-#_07a2c76849bef476a28a18b5ff9d3238p@chr8:57354275..57354292, -
6.24e-28FFCP PHASE1:Hg19::chr8:57354275..57354292,-#_07a2c76849bef476a28a18b5ff9d3238p@chr8:57354275..57354292, -
9.35e-28FFCP PHASE2:Hg19::chr4:26491909..26491918,-#_33121e10078c3c3717955611e143cb22p2@CCKAR
9.35e-28FFCP PHASE1:Hg19::chr4:26491909..26491918,-#_33121e10078c3c3717955611e143cb22p2@CCKAR
1.19e-27FFCP PHASE1:Hg19::chr3:86992689..86992700,-#_8af4d3fc95d4ce361d05d7ac4e8ce07bp@chr3:86992689..86992700, -
1.19e-27FFCP PHASE2:Hg19::chr3:86992689..86992700,-#_8af4d3fc95d4ce361d05d7ac4e8ce07bp@chr3:86992689..86992700, -
1.39e-27FFCP PHASE2:Hg19::chr21:39705323..39705334,-#_11bc51de29ffd1b27ac6571112242127p2@ENST00000436845
1.39e-27FFCP PHASE1:Hg19::chr21:39705323..39705334,-#_11bc51de29ffd1b27ac6571112242127p2@ENST00000436845
2.46e-27FFCP PHASE1:Hg19::chr19:18895892..18895911,-#_13dfad53bb903270962ca535bb8a1ff3p@chr19:18895892..18895911, -
2.46e-27FFCP PHASE2:Hg19::chr19:18895892..18895911,-#_13dfad53bb903270962ca535bb8a1ff3p@chr19:18895892..18895911, -
3.11e-27FFCP PHASE1:Hg19::chr3:29966392..29966406,+#_771a00c5f2b96cb1c72ff3743292aeb8p22@RBMS3
3.11e-27FFCP PHASE2:Hg19::chr3:29966392..29966406,+#_771a00c5f2b96cb1c72ff3743292aeb8p22@RBMS3
3.89e-27FFCP PHASE1:Hg19::chr1:203151934..203151947,-#_60c068a6a08ace9f15fba0ac2397a802p7@CHI3L1
3.89e-27FFCP PHASE2:Hg19::chr1:203151934..203151947,-#_60c068a6a08ace9f15fba0ac2397a802p7@CHI3L1

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