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{{CL
{{CL
|id=CL:0002574
|alt_id=
|name=stromal cell of pancreas
|namespace=cell
|def="A stromal cell of the pancreas." [GOC:tfm]
|xref=
|is_a=CL:0000499
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2011-03-02T02:40:41Z
|def="A stromal cell of the pancreas." [GOC:tfm]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002574
|is_a=CL:0000499
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=stromal cell of pancreas
|namespace=FANTOM
|obo_creation_date=2011-03-02T02:40:41Z
|part_of=UBERON:0001264
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=
}}
}}

Latest revision as of 16:44, 12 September 2014

Name:stromal cell of pancreas
Namespace:FANTOM
Definition:"A stromal cell of the pancreas." [GOC:tfm]
Created by:tmeehan
Creation date:2011-03-02T02:40:41Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000499(stromal cell)
part_of:UBERON:0001264(pancreas)



Children


is a:FF:0000042 (pancreatic stromal cell)
derives from:FF:0000146 (human stromal cell of pancreas sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002574 (stromal cell of pancreas), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
2.55e-98FFCP PHASE2:Hg19::chr3:141121887..141121890,+#_2933f573625ce71a455ef328ab2ca5f6p58@ZBTB38
2.55e-98FFCP PHASE1:Hg19::chr3:141121887..141121890,+#_2933f573625ce71a455ef328ab2ca5f6p58@ZBTB38
1.23e-66FFCP PHASE2:Hg19::chr6:132693829..132693833,-#_1e735935508390571bd31ee6e2ea9212p@chr6:132693829..132693833, -
1.23e-66FFCP PHASE1:Hg19::chr6:132693829..132693833,-#_1e735935508390571bd31ee6e2ea9212p@chr6:132693829..132693833, -
2.39e-66FFCP PHASE2:Hg19::chr4:162563953..162563962,-#_aa79a3634460013d48aa87e2ec8ed72fp@chr4:162563953..162563962, -
2.39e-66FFCP PHASE1:Hg19::chr4:162563953..162563962,-#_aa79a3634460013d48aa87e2ec8ed72fp@chr4:162563953..162563962, -
2.42e-50FFCP PHASE1:Hg19::chr17:59533618..59533656,+#_cbaa1629517d5a52addb51e4c92a8849p2@TBX4
2.42e-50FFCP PHASE2:Hg19::chr17:59533618..59533656,+#_cbaa1629517d5a52addb51e4c92a8849p2@TBX4
6.58e-50FFCP PHASE2:Hg19::chr1:207009817..207009859,+#_20ad5d73e9d6ca812dff5551e7c42d72p2@IL19
6.58e-50FFCP PHASE1:Hg19::chr1:207009817..207009859,+#_20ad5d73e9d6ca812dff5551e7c42d72p2@IL19
2.21e-40FFCP PHASE1:Hg19::chr12:115777087..115777091,+#_daf1ff9f7febb6371a57ff9a18654eb0p@chr12:115777087..115777091, +
2.21e-40FFCP PHASE2:Hg19::chr12:115777087..115777091,+#_daf1ff9f7febb6371a57ff9a18654eb0p@chr12:115777087..115777091, +
2.58e-34FFCP PHASE2:Hg19::chr11:7698474..7698479,-#_3f60a9803033bcae99e4dafbe926e504p14@CYB5R2
2.58e-34FFCP PHASE1:Hg19::chr11:7698474..7698479,-#_3f60a9803033bcae99e4dafbe926e504p14@CYB5R2
3.61e-34FFCP PHASE1:Hg19::chr7:18891010..18891018,+#_100d0ec4436715bc6fe81dd655e20236p36@HDAC9
3.61e-34FFCP PHASE2:Hg19::chr7:18891010..18891018,+#_100d0ec4436715bc6fe81dd655e20236p36@HDAC9
3.16e-29FFCP PHASE2:Hg19::chr18:65984050..65984068,-#_38cca48c813fd7339e489ec870d8e4c0p@chr18:65984050..65984068, -
3.16e-29FFCP PHASE1:Hg19::chr18:65984050..65984068,-#_38cca48c813fd7339e489ec870d8e4c0p@chr18:65984050..65984068, -
4.2e-29FFCP PHASE2:Hg19::chr18:61495529..61495546,+#_aab5d9c874ba3e027349a773ab1368e6p@chr18:61495529..61495546, +
4.2e-29FFCP PHASE1:Hg19::chr18:61495529..61495546,+#_aab5d9c874ba3e027349a773ab1368e6p@chr18:61495529..61495546, +
2.78e-26FFCP PHASE2:Hg19::chr7:116200876..116200885,+#_61565205bc58954afebb4167ce54ae5ap46@CAV1
2.78e-26FFCP PHASE1:Hg19::chr7:116200876..116200885,+#_61565205bc58954afebb4167ce54ae5ap46@CAV1
5.93e-26FFCP PHASE1:Hg19::chr11:108422926..108422937,-#_a1dfa19bd26d2ccc2e22737a457f97a1p13@EXPH5
5.93e-26FFCP PHASE2:Hg19::chr11:108422926..108422937,-#_a1dfa19bd26d2ccc2e22737a457f97a1p13@EXPH5
1.67e-23FFCP PHASE1:Hg19::chr18:59685444..59685459,-#_3aacb563511b99ed816abae1be659bfbp@chr18:59685444..59685459, -
1.67e-23FFCP PHASE2:Hg19::chr18:59685444..59685459,-#_3aacb563511b99ed816abae1be659bfbp@chr18:59685444..59685459, -
1.53e-21FFCP PHASE2:Hg19::chr15:96590126..96590136,-#_88c035d303e514f7381235d7dd479835p1@ENST00000561051
1.53e-21FFCP PHASE1:Hg19::chr15:96590126..96590136,-#_88c035d303e514f7381235d7dd479835p1@ENST00000561051
1.88e-21FFCP PHASE2:Hg19::chr7:42377930..42377943,-#_e4ca87f38071407884f9bb5c08dd4da7p@chr7:42377930..42377943, -
1.88e-21FFCP PHASE1:Hg19::chr7:42377930..42377943,-#_e4ca87f38071407884f9bb5c08dd4da7p@chr7:42377930..42377943, -
2.3e-21FFCP PHASE2:Hg19::chr18:52969813..52969823,-#_561126eca71610ded6c500e31764ebcfp67@TCF4
2.3e-21FFCP PHASE1:Hg19::chr18:52969813..52969823,-#_561126eca71610ded6c500e31764ebcfp67@TCF4
1.88e-19FFCP PHASE2:Hg19::chr5:119697827..119697855,+#_e8fd783e827bbecf0112a7606295127dp@chr5:119697827..119697855, +
1.88e-19FFCP PHASE1:Hg19::chr5:119697827..119697855,+#_e8fd783e827bbecf0112a7606295127dp@chr5:119697827..119697855, +
2.25e-19FFCP PHASE2:Hg19::chr10:28034450..28034462,+#_8fa3b6da5fbc9ff77bec6c473679176fp@chr10:28034450..28034462, +
2.25e-19FFCP PHASE1:Hg19::chr10:28034450..28034462,+#_8fa3b6da5fbc9ff77bec6c473679176fp@chr10:28034450..28034462, +
2.71e-19FFCP PHASE1:Hg19::chr10:17119642..17119662,-#_2bae4b1590c733d8accecb3f9c0192d3p2@AK129937
2.71e-19FFCP PHASE2:Hg19::chr10:17119642..17119662,-#_2bae4b1590c733d8accecb3f9c0192d3p2@AK129937
3.25e-19FFCP PHASE2:Hg19::chr16:85617082..85617098,-#_d8c20c0e317c6d365c92019f9621fbdfp@chr16:85617082..85617098, -
3.25e-19FFCP PHASE1:Hg19::chr16:85617082..85617098,-#_d8c20c0e317c6d365c92019f9621fbdfp@chr16:85617082..85617098, -
3.25e-19FFCP PHASE2:Hg19::chr3:170458920..170458937,-#_d8c20c0e317c6d365c92019f9621fbdfp@chr3:170458920..170458937, -
3.25e-19FFCP PHASE1:Hg19::chr3:170458920..170458937,-#_d8c20c0e317c6d365c92019f9621fbdfp@chr3:170458920..170458937, -
4.44e-18FFCP PHASE2:Hg19::chr7:120629846..120629858,+#_af2a2b15a149c62e7d567df7e552f03ep20@C7orf58
4.44e-18FFCP PHASE1:Hg19::chr7:120629846..120629858,+#_af2a2b15a149c62e7d567df7e552f03ep20@C7orf58
7.37e-18FFCP PHASE2:Hg19::chr5:113573789..113573792,+#_37037784c893fabff9e9ddf16f5e93e7p@chr5:113573789..113573792, +
7.37e-18FFCP PHASE1:Hg19::chr5:113573789..113573792,+#_37037784c893fabff9e9ddf16f5e93e7p@chr5:113573789..113573792, +
1.03e-17FFCP PHASE2:Hg19::chr7:32982032..32982051,-#_d3920e93f8924c3f61291a42bfa958dcp8@RP9P
1.03e-17FFCP PHASE1:Hg19::chr7:32982032..32982051,-#_d3920e93f8924c3f61291a42bfa958dcp8@RP9P
1.44e-17FFCP PHASE2:Hg19::chr10:28002936..28002939,-#_2ec9e012515ad6ba6a13f87a6bd21e0cp@chr10:28002936..28002939, -
1.44e-17FFCP PHASE1:Hg19::chr10:28002936..28002939,-#_2ec9e012515ad6ba6a13f87a6bd21e0cp@chr10:28002936..28002939, -
5.53e-17FFCP PHASE2:Hg19::chr19:16213636..16213660,+#_77cd8c40ce559d8a2f7992574cfbe069p@chr19:16213636..16213660, +
5.53e-17FFCP PHASE1:Hg19::chr19:16213636..16213660,+#_77cd8c40ce559d8a2f7992574cfbe069p@chr19:16213636..16213660, +
1.04e-16FFCP PHASE2:Hg19::chr5:119697859..119697884,+#_2ef591df4b3ebeb44abe958e63cc4142p@chr5:119697859..119697884, +
1.04e-16FFCP PHASE1:Hg19::chr5:119697859..119697884,+#_2ef591df4b3ebeb44abe958e63cc4142p@chr5:119697859..119697884, +
5.56e-16FFCP PHASE2:Hg19::chr1:170631904..170631913,+#_94eb0815bbfd2cd3671ae52c5089057bp34@PRRX1
5.56e-16FFCP PHASE1:Hg19::chr1:170631904..170631913,+#_94eb0815bbfd2cd3671ae52c5089057bp34@PRRX1
1.16e-15FFCP PHASE2:Hg19::chr12:96236331..96236358,-#_a1a755fd155fd072846b7c86180b3a96p@chr12:96236331..96236358, -
1.16e-15FFCP PHASE1:Hg19::chr12:96236331..96236358,-#_a1a755fd155fd072846b7c86180b3a96p@chr12:96236331..96236358, -
2.06e-15FFCP PHASE2:Hg19::chr18:65337698..65337712,+#_d3f0df9dea1ba452d33efe84058c5962p@chr18:65337698..65337712, +
2.06e-15FFCP PHASE1:Hg19::chr18:65337698..65337712,+#_d3f0df9dea1ba452d33efe84058c5962p@chr18:65337698..65337712, +
2.75e-15FFCP PHASE2:Hg19::chr11:85429940..85429951,-#_3b8c3842d9fc993dd446c3404c7a445ep10@SYTL2
2.75e-15FFCP PHASE1:Hg19::chr11:85429940..85429951,-#_3b8c3842d9fc993dd446c3404c7a445ep10@SYTL2
2.75e-15FFCP PHASE2:Hg19::chr1:152670795..152670806,+#_3b8c3842d9fc993dd446c3404c7a445ep2@LCE2A
2.75e-15FFCP PHASE1:Hg19::chr1:152670795..152670806,+#_3b8c3842d9fc993dd446c3404c7a445ep2@LCE2A
2.11e-14FFCP PHASE2:Hg19::chr1:156669471..156669487,-#_f7e6e7595dfa30cd41d0a2d8c83e83c9p@chr1:156669471..156669487, -
2.11e-14FFCP PHASE1:Hg19::chr1:156669471..156669487,-#_f7e6e7595dfa30cd41d0a2d8c83e83c9p@chr1:156669471..156669487, -
3.15e-14FFCP PHASE2:Hg19::chr2:114300263..114300269,-#_bf2e59c96f1774ef3c0be3303f5db3e4p1@ENST00000416758
3.15e-14FFCP PHASE1:Hg19::chr2:114300263..114300269,-#_bf2e59c96f1774ef3c0be3303f5db3e4p1@ENST00000416758
3.98e-14FFCP PHASE2:Hg19::chr6:74472547..74472568,+#_a3e608d3b7b721f449760058c5728e05p@chr6:74472547..74472568, +
3.98e-14FFCP PHASE1:Hg19::chr6:74472547..74472568,+#_a3e608d3b7b721f449760058c5728e05p@chr6:74472547..74472568, +
9.73e-14FFCP PHASE2:Hg19::chr10:28033776..28033788,+#_0099ca3eb48eef112e203b1bf4cb6427p1@ENST00000419777
9.73e-14FFCP PHASE1:Hg19::chr10:28033776..28033788,+#_0099ca3eb48eef112e203b1bf4cb6427p1@ENST00000419777
1.1e-13FFCP PHASE2:Hg19::chr15:39571769..39571781,-#_6f0be56c49862db72f2942c10aae125cp@chr15:39571769..39571781, -
1.1e-13FFCP PHASE1:Hg19::chr15:39571769..39571781,-#_6f0be56c49862db72f2942c10aae125cp@chr15:39571769..39571781, -
1.25e-13FFCP PHASE2:Hg19::chr7:120629022..120629033,+#_b7499c396a4caa0f4f3b7e65a67e7658p21@C7orf58
1.25e-13FFCP PHASE1:Hg19::chr7:120629022..120629033,+#_b7499c396a4caa0f4f3b7e65a67e7658p21@C7orf58
1.25e-13FFCP PHASE2:Hg19::chr6:85343999..85344011,+#_b7499c396a4caa0f4f3b7e65a67e7658p@chr6:85343999..85344011, +
1.25e-13FFCP PHASE1:Hg19::chr6:85343999..85344011,+#_b7499c396a4caa0f4f3b7e65a67e7658p@chr6:85343999..85344011, +
1.42e-13FFCP PHASE2:Hg19::chr1:110625257..110625270,+#_f30786a312405c8b1da8aef932b0088fp2@ENST00000554808
1.42e-13FFCP PHASE1:Hg19::chr1:110625257..110625270,+#_f30786a312405c8b1da8aef932b0088fp2@ENST00000554808
2.06e-13FFCP PHASE2:Hg19::chr3:141121903..141121912,+#_94c91db2e0a724f9bc6aa435c5985712p31@ZBTB38
2.06e-13FFCP PHASE1:Hg19::chr3:141121903..141121912,+#_94c91db2e0a724f9bc6aa435c5985712p31@ZBTB38
3.33e-13FFCP PHASE2:Hg19::chr1:83982415..83982420,+#_ced127415a3522d2a8ba7e2139485b92p@chr1:83982415..83982420, +
3.33e-13FFCP PHASE1:Hg19::chr1:83982415..83982420,+#_ced127415a3522d2a8ba7e2139485b92p@chr1:83982415..83982420, +
3.76e-13FFCP PHASE2:Hg19::chr7:43733671..43733688,-#_77f20c18d793df9d8729147ac831a9c8p@chr7:43733671..43733688, -
3.76e-13FFCP PHASE1:Hg19::chr7:43733671..43733688,-#_77f20c18d793df9d8729147ac831a9c8p@chr7:43733671..43733688, -
5.38e-13FFCP PHASE2:Hg19::chr18:34272641..34272652,+#_b136521f2dc236bde2ef46a355c145e3p7@FHOD3
5.38e-13FFCP PHASE1:Hg19::chr18:34272641..34272652,+#_b136521f2dc236bde2ef46a355c145e3p7@FHOD3
6.06e-13FFCP PHASE1:Hg19::chr12:114843910..114843921,-#_3d7a27327913fb13a8d29e90f7e3773cp6@TBX5
6.06e-13FFCP PHASE2:Hg19::chr12:114843910..114843921,-#_3d7a27327913fb13a8d29e90f7e3773cp6@TBX5
7.68e-13FFCP PHASE2:Hg19::chrX:3102846..3102872,+#_180304dbd03d8b2f154ce22272ffa5d9p@chrX:3102846..3102872, +
7.68e-13FFCP PHASE1:Hg19::chrX:3102846..3102872,+#_180304dbd03d8b2f154ce22272ffa5d9p@chrX:3102846..3102872, +
9.73e-13FFCP PHASE2:Hg19::chr2:31805998..31806012,-#_abc8a70eb8292d4cc1833a6e7f565570p1@SRD5A2
9.73e-13FFCP PHASE1:Hg19::chr2:31805998..31806012,-#_abc8a70eb8292d4cc1833a6e7f565570p1@SRD5A2
9.73e-13FFCP PHASE2:Hg19::chr6:1389690..1389700,-#_abc8a70eb8292d4cc1833a6e7f565570p@chr6:1389690..1389700, -
9.73e-13FFCP PHASE1:Hg19::chr6:1389690..1389700,-#_abc8a70eb8292d4cc1833a6e7f565570p@chr6:1389690..1389700, -
1.09e-12FFCP PHASE2:Hg19::chr4:77956674..77956685,+#_932ad6cb9285ee96a18a29f8fe87ab25p@chr4:77956674..77956685, +
1.09e-12FFCP PHASE1:Hg19::chr4:77956674..77956685,+#_932ad6cb9285ee96a18a29f8fe87ab25p@chr4:77956674..77956685, +
1.09e-12FFCP PHASE2:Hg19::chr8:120430391..120430409,+#_932ad6cb9285ee96a18a29f8fe87ab25p@chr8:120430391..120430409, +
1.09e-12FFCP PHASE1:Hg19::chr8:120430391..120430409,+#_932ad6cb9285ee96a18a29f8fe87ab25p@chr8:120430391..120430409, +

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