Personal tools

DOID:0050615: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{DOID |id=DOID:0050615 |name=respiratory system cancer |namespace= |def="An organ system cancer located_in the respiratory system that is characterized by uncontrolled ce...")
 
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{DOID
{{DOID
|id=DOID:0050615
|alt_id=
|name=respiratory system cancer
|namespace=
|def="An organ system cancer located_in the respiratory system that is characterized by uncontrolled cellular proliferation in the respiratory tract." [url:http\://en.wikipedia.org/wiki/Respiratory_tract_neoplasm]
|xref=
|is_a=DOID:0050686
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="An organ system cancer located_in the respiratory system that is characterized by uncontrolled cellular proliferation in the respiratory tract." [url:http://en.wikipedia.org/wiki/Respiratory_tract_neoplasm]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=DOID:0050615
|is_a=DOID:0050686
|is_obsolete=
|located_in=
|located_in=
|name=respiratory system cancer
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|subset=
|synonym=
|union_of=
|xref=
}}
}}

Latest revision as of 16:47, 12 September 2014

Name:respiratory system cancer
Namespace:FANTOM
Definition:"An organ system cancer located_in the respiratory system that is characterized by uncontrolled cellular proliferation in the respiratory tract." [url:http://en.wikipedia.org/wiki/Respiratory_tract_neoplasm]

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:0050686(organ system cancer)



Children


is a:DOID:0050619 (paranasal sinus cancer),DOID:1324 (lung cancer)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:0050615 (respiratory system cancer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.24e-40FFCP PHASE2:Hg19::chr6:73785930..73785949,-#_be15af24dd909034b65168b7baa310eap@chr6:73785930..73785949, -
5.24e-40FFCP PHASE1:Hg19::chr6:73785930..73785949,-#_be15af24dd909034b65168b7baa310eap@chr6:73785930..73785949, -
7.83e-38FFCP PHASE1:Hg19::chr6:73786620..73786627,+#_b3bde08624220a79b525b7c4b8842f04p@chr6:73786620..73786627, +
7.83e-38FFCP PHASE1:Hg19::chr18:10085554..10085562,+#_b3bde08624220a79b525b7c4b8842f04p@chr18:10085554..10085562, +
7.83e-38FFCP PHASE2:Hg19::chr6:73786593..73786601,+#_b3bde08624220a79b525b7c4b8842f04p@chr6:73786593..73786601, +
7.83e-38FFCP PHASE2:Hg19::chr18:10085554..10085562,+#_b3bde08624220a79b525b7c4b8842f04p@chr18:10085554..10085562, +
7.83e-38FFCP PHASE2:Hg19::chr6:73786620..73786627,+#_b3bde08624220a79b525b7c4b8842f04p@chr6:73786620..73786627, +
7.83e-38FFCP PHASE1:Hg19::chr11:69518108..69518118,-#_b3bde08624220a79b525b7c4b8842f04p@chr11:69518108..69518118, -
7.83e-38FFCP PHASE2:Hg19::chr11:69518108..69518118,-#_b3bde08624220a79b525b7c4b8842f04p@chr11:69518108..69518118, -
7.83e-38FFCP PHASE1:Hg19::chr11:69518332..69518343,-#_b3bde08624220a79b525b7c4b8842f04p@chr11:69518332..69518343, -
7.83e-38FFCP PHASE1:Hg19::chr6:73786593..73786601,+#_b3bde08624220a79b525b7c4b8842f04p@chr6:73786593..73786601, +
7.83e-38FFCP PHASE2:Hg19::chr11:69518332..69518343,-#_b3bde08624220a79b525b7c4b8842f04p@chr11:69518332..69518343, -
1.36e-28FFCP PHASE2:Hg19::chr2:135119540..135119551,+#_049d61f2023589cc98469eaedb1b8328p@chr2:135119540..135119551, +
1.36e-28FFCP PHASE1:Hg19::chr2:135119522..135119533,+#_049d61f2023589cc98469eaedb1b8328p@chr2:135119522..135119533, +
1.36e-28FFCP PHASE1:Hg19::chr3:95928689..95928701,-#_049d61f2023589cc98469eaedb1b8328p@chr3:95928689..95928701, -
1.36e-28FFCP PHASE2:Hg19::chr12:79406792..79406813,+#_049d61f2023589cc98469eaedb1b8328p@chr12:79406792..79406813, +
1.36e-28FFCP PHASE1:Hg19::chr2:135119540..135119551,+#_049d61f2023589cc98469eaedb1b8328p@chr2:135119540..135119551, +
1.36e-28FFCP PHASE1:Hg19::chr12:79406792..79406813,+#_049d61f2023589cc98469eaedb1b8328p@chr12:79406792..79406813, +
1.36e-28FFCP PHASE2:Hg19::chr2:135119522..135119533,+#_049d61f2023589cc98469eaedb1b8328p@chr2:135119522..135119533, +
1.36e-28FFCP PHASE2:Hg19::chr3:95928689..95928701,-#_049d61f2023589cc98469eaedb1b8328p@chr3:95928689..95928701, -
1.64e-28FFCP PHASE1:Hg19::chr2:233352573..233352580,-#_0dee07cc5e83b3603781de4f2fa4652ap4@ECEL1
1.64e-28FFCP PHASE2:Hg19::chr2:233352573..233352580,-#_0dee07cc5e83b3603781de4f2fa4652ap4@ECEL1
4.2e-28FFCP PHASE1:Hg19::chr8:63077406..63077421,-#_6daf5140ebc3753c6db36ef85bf8c45bp@chr8:63077406..63077421, -
4.2e-28FFCP PHASE2:Hg19::chr8:63077406..63077421,-#_6daf5140ebc3753c6db36ef85bf8c45bp@chr8:63077406..63077421, -
7.63e-26FFCP PHASE2:Hg19::chr2:97626600..97626606,-#_a60afee1b6eb75a72af1746219364d52p@chr2:97626600..97626606, -
7.63e-26FFCP PHASE2:Hg19::chr5:146890655..146890661,-#_a60afee1b6eb75a72af1746219364d52p@chr5:146890655..146890661, -
7.63e-26FFCP PHASE2:Hg19::chr21:36599466..36599476,-#_a60afee1b6eb75a72af1746219364d52p@chr21:36599466..36599476, -
7.63e-26FFCP PHASE1:Hg19::chr16:50583018..50583026,+#_a60afee1b6eb75a72af1746219364d52p@chr16:50583018..50583026, +
7.63e-26FFCP PHASE1:Hg19::chr7:157944243..157944249,-#_a60afee1b6eb75a72af1746219364d52p@chr7:157944243..157944249, -
7.63e-26FFCP PHASE1:Hg19::chr15:46282024..46282028,+#_a60afee1b6eb75a72af1746219364d52p@chr15:46282024..46282028, +
7.63e-26FFCP PHASE1:Hg19::chr6:998877..998891,-#_a60afee1b6eb75a72af1746219364d52p@chr6:998877..998891, -
7.63e-26FFCP PHASE1:Hg19::chr12:79756403..79756414,-#_a60afee1b6eb75a72af1746219364d52p@chr12:79756403..79756414, -
7.63e-26FFCP PHASE1:Hg19::chr3:95928667..95928672,-#_a60afee1b6eb75a72af1746219364d52p@chr3:95928667..95928672, -
7.63e-26FFCP PHASE2:Hg19::chr11:69634129..69634145,-#_a60afee1b6eb75a72af1746219364d52p3@FGF3
7.63e-26FFCP PHASE2:Hg19::chr1:167237970..167237996,+#_a60afee1b6eb75a72af1746219364d52p@chr1:167237970..167237996, +
7.63e-26FFCP PHASE1:Hg19::chr14:79331250..79331261,+#_a60afee1b6eb75a72af1746219364d52p@chr14:79331250..79331261, +
7.63e-26FFCP PHASE2:Hg19::chr5:146939429..146939436,+#_a60afee1b6eb75a72af1746219364d52p3@LOC153469
7.63e-26FFCP PHASE1:Hg19::chr6:45405393..45405412,+#_a60afee1b6eb75a72af1746219364d52p@chr6:45405393..45405412, +
7.63e-26FFCP PHASE2:Hg19::chr14:79331318..79331327,+#_a60afee1b6eb75a72af1746219364d52p@chr14:79331318..79331327, +
7.63e-26FFCP PHASE2:Hg19::chr3:86926149..86926150,+#_a60afee1b6eb75a72af1746219364d52p@chr3:86926149..86926150, +
7.63e-26FFCP PHASE1:Hg19::chr3:59032724..59032732,-#_a60afee1b6eb75a72af1746219364d52p@chr3:59032724..59032732, -
7.63e-26FFCP PHASE1:Hg19::chr6:45399245..45399258,+#_a60afee1b6eb75a72af1746219364d52p@chr6:45399245..45399258, +
7.63e-26FFCP PHASE2:Hg19::chr2:192917107..192917114,+#_a60afee1b6eb75a72af1746219364d52p@chr2:192917107..192917114, +
7.63e-26FFCP PHASE1:Hg19::chr12:55223769..55223774,+#_a60afee1b6eb75a72af1746219364d52p@chr12:55223769..55223774, +
7.63e-26FFCP PHASE2:Hg19::chr16:50582928..50582933,+#_a60afee1b6eb75a72af1746219364d52p@chr16:50582928..50582933, +
7.63e-26FFCP PHASE1:Hg19::chr11:69634149..69634169,-#_a60afee1b6eb75a72af1746219364d52p2@FGF3
7.63e-26FFCP PHASE2:Hg19::chr3:96150..96169,+#_a60afee1b6eb75a72af1746219364d52p@chr3:96150..96169, +
7.63e-26FFCP PHASE1:Hg19::chr4:4204390..4204427,-#_a60afee1b6eb75a72af1746219364d52p@chr4:4204390..4204427, -
7.63e-26FFCP PHASE2:Hg19::chr5:146890667..146890672,-#_a60afee1b6eb75a72af1746219364d52p@chr5:146890667..146890672, -
7.63e-26FFCP PHASE1:Hg19::chr6:45399533..45399540,+#_a60afee1b6eb75a72af1746219364d52p@chr6:45399533..45399540, +
7.63e-26FFCP PHASE1:Hg19::chrX:151620193..151620201,-#_a60afee1b6eb75a72af1746219364d52p4@GABRA3
7.63e-26FFCP PHASE2:Hg19::chr6:45399294..45399301,+#_a60afee1b6eb75a72af1746219364d52p@chr6:45399294..45399301, +
7.63e-26FFCP PHASE1:Hg19::chr16:50583050..50583076,+#_a60afee1b6eb75a72af1746219364d52p@chr16:50583050..50583076, +
7.63e-26FFCP PHASE1:Hg19::chr1:11000123..11000131,-#_a60afee1b6eb75a72af1746219364d52p@chr1:11000123..11000131, -
7.63e-26FFCP PHASE2:Hg19::chr5:175298205..175298209,-#_a60afee1b6eb75a72af1746219364d52p@chr5:175298205..175298209, -
7.63e-26FFCP PHASE1:Hg19::chr3:95928676..95928681,-#_a60afee1b6eb75a72af1746219364d52p@chr3:95928676..95928681, -
7.63e-26FFCP PHASE2:Hg19::chr11:69634149..69634169,-#_a60afee1b6eb75a72af1746219364d52p2@FGF3
7.63e-26FFCP PHASE2:Hg19::chr12:79406759..79406766,+#_a60afee1b6eb75a72af1746219364d52p@chr12:79406759..79406766, +
7.63e-26FFCP PHASE1:Hg19::chr14:79331318..79331327,+#_a60afee1b6eb75a72af1746219364d52p@chr14:79331318..79331327, +
7.63e-26FFCP PHASE2:Hg19::chr3:95928653..95928656,-#_a60afee1b6eb75a72af1746219364d52p@chr3:95928653..95928656, -
7.63e-26FFCP PHASE1:Hg19::chr5:146890606..146890628,-#_a60afee1b6eb75a72af1746219364d52p@chr5:146890606..146890628, -
7.63e-26FFCP PHASE2:Hg19::chr6:45405332..45405343,+#_a60afee1b6eb75a72af1746219364d52p@chr6:45405332..45405343, +
7.63e-26FFCP PHASE2:Hg19::chr5:146890510..146890519,-#_a60afee1b6eb75a72af1746219364d52p@chr5:146890510..146890519, -
7.63e-26FFCP PHASE1:Hg19::chr6:45399263..45399274,+#_a60afee1b6eb75a72af1746219364d52p@chr6:45399263..45399274, +
7.63e-26FFCP PHASE1:Hg19::chr17:39093486..39093495,-#_a60afee1b6eb75a72af1746219364d52p8@KRT23
7.63e-26FFCP PHASE1:Hg19::chr17:79974321..79974331,+#_a60afee1b6eb75a72af1746219364d52p@chr17:79974321..79974331, +
7.63e-26FFCP PHASE2:Hg19::chr16:50583018..50583026,+#_a60afee1b6eb75a72af1746219364d52p@chr16:50583018..50583026, +
7.63e-26FFCP PHASE1:Hg19::chr11:69634178..69634189,-#_a60afee1b6eb75a72af1746219364d52p4@FGF3
7.63e-26FFCP PHASE2:Hg19::chr7:31938679..31938703,-#_a60afee1b6eb75a72af1746219364d52p@chr7:31938679..31938703, -
7.63e-26FFCP PHASE1:Hg19::chr3:95401960..95401971,-#_a60afee1b6eb75a72af1746219364d52p1@ENST00000494840, p1@uc003dro.1
7.63e-26FFCP PHASE1:Hg19::chr11:36489757..36489777,+#_a60afee1b6eb75a72af1746219364d52p@chr11:36489757..36489777, +
7.63e-26FFCP PHASE1:Hg19::chr2:192917090..192917101,+#_a60afee1b6eb75a72af1746219364d52p@chr2:192917090..192917101, +
7.63e-26FFCP PHASE2:Hg19::chr5:146890870..146890882,-#_a60afee1b6eb75a72af1746219364d52p@chr5:146890870..146890882, -
7.63e-26FFCP PHASE2:Hg19::chr14:79331180..79331190,+#_a60afee1b6eb75a72af1746219364d52p@chr14:79331180..79331190, +
7.63e-26FFCP PHASE2:Hg19::chr17:39093486..39093495,-#_a60afee1b6eb75a72af1746219364d52p8@KRT23
7.63e-26FFCP PHASE2:Hg19::chr12:28182901..28182931,+#_a60afee1b6eb75a72af1746219364d52p@chr12:28182901..28182931, +
7.63e-26FFCP PHASE2:Hg19::chr17:79974321..79974331,+#_a60afee1b6eb75a72af1746219364d52p@chr17:79974321..79974331, +
7.63e-26FFCP PHASE1:Hg19::chr9:140350189..140350212,-#_a60afee1b6eb75a72af1746219364d52p30@NELF
7.63e-26FFCP PHASE2:Hg19::chr6:998877..998891,-#_a60afee1b6eb75a72af1746219364d52p@chr6:998877..998891, -
7.63e-26FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_a60afee1b6eb75a72af1746219364d52p@chr6:125378873..125378876, +
7.63e-26FFCP PHASE2:Hg19::chr11:69634178..69634189,-#_a60afee1b6eb75a72af1746219364d52p4@FGF3
7.63e-26FFCP PHASE2:Hg19::chr7:157944243..157944249,-#_a60afee1b6eb75a72af1746219364d52p@chr7:157944243..157944249, -
7.63e-26FFCP PHASE2:Hg19::chr3:95928667..95928672,-#_a60afee1b6eb75a72af1746219364d52p@chr3:95928667..95928672, -
7.63e-26FFCP PHASE2:Hg19::chr12:130617969..130617976,+#_a60afee1b6eb75a72af1746219364d52p@chr12:130617969..130617976, +
7.63e-26FFCP PHASE1:Hg19::chr12:79406759..79406766,+#_a60afee1b6eb75a72af1746219364d52p@chr12:79406759..79406766, +
7.63e-26FFCP PHASE1:Hg19::chr2:97626600..97626606,-#_a60afee1b6eb75a72af1746219364d52p@chr2:97626600..97626606, -
7.63e-26FFCP PHASE1:Hg19::chr5:146890655..146890661,-#_a60afee1b6eb75a72af1746219364d52p@chr5:146890655..146890661, -
7.63e-26FFCP PHASE1:Hg19::chr21:36599466..36599476,-#_a60afee1b6eb75a72af1746219364d52p@chr21:36599466..36599476, -
7.63e-26FFCP PHASE2:Hg19::chr6:45405393..45405412,+#_a60afee1b6eb75a72af1746219364d52p@chr6:45405393..45405412, +
7.63e-26FFCP PHASE2:Hg19::chr6:45399245..45399258,+#_a60afee1b6eb75a72af1746219364d52p@chr6:45399245..45399258, +
7.63e-26FFCP PHASE1:Hg19::chr1:167237970..167237996,+#_a60afee1b6eb75a72af1746219364d52p@chr1:167237970..167237996, +
7.63e-26FFCP PHASE2:Hg19::chr3:59032724..59032732,-#_a60afee1b6eb75a72af1746219364d52p@chr3:59032724..59032732, -
7.63e-26FFCP PHASE2:Hg19::chr16:50583050..50583076,+#_a60afee1b6eb75a72af1746219364d52p@chr16:50583050..50583076, +
7.63e-26FFCP PHASE1:Hg19::chr11:69634335..69634346,-#_a60afee1b6eb75a72af1746219364d52p6@FGF3
7.63e-26FFCP PHASE2:Hg19::chr12:79756373..79756391,-#_a60afee1b6eb75a72af1746219364d52p@chr12:79756373..79756391, -
7.63e-26FFCP PHASE1:Hg19::chr5:146939429..146939436,+#_a60afee1b6eb75a72af1746219364d52p3@LOC153469
7.63e-26FFCP PHASE1:Hg19::chr2:192917107..192917114,+#_a60afee1b6eb75a72af1746219364d52p@chr2:192917107..192917114, +
7.63e-26FFCP PHASE1:Hg19::chr14:79331180..79331190,+#_a60afee1b6eb75a72af1746219364d52p@chr14:79331180..79331190, +
7.63e-26FFCP PHASE1:Hg19::chr3:86926149..86926150,+#_a60afee1b6eb75a72af1746219364d52p@chr3:86926149..86926150, +
7.63e-26FFCP PHASE2:Hg19::chr14:79331221..79331232,+#_a60afee1b6eb75a72af1746219364d52p@chr14:79331221..79331232, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=DOID:0050615&oldid=3275596"