DOID:0060061: Difference between revisions
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|id=DOID:0060061
|name=cutaneous T cell lymphoma
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|def="A non-Hodgkin's lymphoma that is caused by a mutation of T cells." [url:http\://en.wikipedia.org/...") |
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{{DOID | {{DOID | ||
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| | |def="A non-Hodgkin's lymphoma that is caused by a mutation of T cells." [url:http://en.wikipedia.org/wiki/Cutaneous_T-cell_lymphoma] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
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|has_quality= | |has_quality= | ||
|id=DOID:0060061 | |||
|is_a=DOID:0050749 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=cutaneous T cell lymphoma | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo | |||
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}} | }} | ||
Latest revision as of 16:47, 12 September 2014
| Name: | cutaneous T cell lymphoma |
|---|---|
| Namespace: | FANTOM |
| Definition: | "A non-Hodgkin's lymphoma that is caused by a mutation of T cells." [url:http://en.wikipedia.org/wiki/Cutaneous_T-cell_lymphoma] |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | DOID:0050749(peripheral T-cell lymphoma) |
|---|
Children
| is a: | DOID:8691 (mycosis fungoides) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10744-110C6 (mycosis fungoides, T cell lymphoma cell line:HuT 102 TIB-162)
Mouse (Mus musculus)
- 10744-110C6 (mycosis fungoides, T cell lymphoma cell line:HuT 102 TIB-162)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:0060061 (cutaneous T cell lymphoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE2:Hg19::chr9:93917134..93917162,-#_1269e137f4ffd8d8038a1a1cc9189d08 | p@chr9:93917134..93917162, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr8:42037604..42037608,-#_1269e137f4ffd8d8038a1a1cc9189d08 | p@chr8:42037604..42037608, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr1:1173212..1173215,-#_1269e137f4ffd8d8038a1a1cc9189d08 | p@chr1:1173212..1173215, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr6:100604462..100604467,-#_1269e137f4ffd8d8038a1a1cc9189d08 | p@chr6:100604462..100604467, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr1:93043060..93043065,-#_1269e137f4ffd8d8038a1a1cc9189d08 | p@chr1:93043060..93043065, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr5:107253874..107253881,-#_1269e137f4ffd8d8038a1a1cc9189d08 | p@chr5:107253874..107253881, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr9:93917134..93917162,-#_1269e137f4ffd8d8038a1a1cc9189d08 | p@chr9:93917134..93917162, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr1:1173212..1173215,-#_1269e137f4ffd8d8038a1a1cc9189d08 | p@chr1:1173212..1173215, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr8:42037604..42037608,-#_1269e137f4ffd8d8038a1a1cc9189d08 | p@chr8:42037604..42037608, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr13:50802126..50802138,+#_1269e137f4ffd8d8038a1a1cc9189d08 | p@chr13:50802126..50802138, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr14:22356420..22356461,+#_1269e137f4ffd8d8038a1a1cc9189d08 | p1@AB305742, p1@AF532837, p1@AF532838, p1@AF532839, p1@AF532840, p1@AF532841, p1@AF532842, p1@AF532843, p1@AF532844, p1@AF532845, p1@AF532847, p1@AF532848, p1@AF532849, p1@AF532850, p1@AF532851, p1@AF532852, p1@AF532853, p1@AF532854, p1@AF532856, p1@AY135832, p1@AY135833, p1@AY135834, p1@AY135835, p1@AY135836, p1@AY135837, p1@AY135838, p1@AY135839, p1@AY135840, p1@AY135841, p1@AY135842, p1@AY135843, p1@AY135844, p1@AY135846, p1@AY135847, p1@AY135849, p1@AY135850, p1@AY135851, p1@AY135852, p1@AY135853, p1@EU340840, p1@M17652, p1@M17653, p1@M27369, p1@S82064, p1@X04940, p1@X04946, p1@X92766, p1@X92783, p1@X92883 |
| 5.42e-195 | FFCP PHASE2:Hg19::chr12:29165730..29165749,-#_1269e137f4ffd8d8038a1a1cc9189d08 | p@chr12:29165730..29165749, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr5:107253874..107253881,-#_1269e137f4ffd8d8038a1a1cc9189d08 | p@chr5:107253874..107253881, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr18:56816533..56816576,+#_1269e137f4ffd8d8038a1a1cc9189d08 | p@chr18:56816533..56816576, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr12:29165730..29165749,-#_1269e137f4ffd8d8038a1a1cc9189d08 | p@chr12:29165730..29165749, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr14:22356420..22356461,+#_1269e137f4ffd8d8038a1a1cc9189d08 | p1@AB305742, p1@AF532837, p1@AF532838, p1@AF532839, p1@AF532840, p1@AF532841, p1@AF532842, p1@AF532843, p1@AF532844, p1@AF532845, p1@AF532847, p1@AF532848, p1@AF532849, p1@AF532850, p1@AF532851, p1@AF532852, p1@AF532853, p1@AF532854, p1@AF532856, p1@AY135832, p1@AY135833, p1@AY135834, p1@AY135835, p1@AY135836, p1@AY135837, p1@AY135838, p1@AY135839, p1@AY135840, p1@AY135841, p1@AY135842, p1@AY135843, p1@AY135844, p1@AY135846, p1@AY135847, p1@AY135849, p1@AY135850, p1@AY135851, p1@AY135852, p1@AY135853, p1@EU340840, p1@M17652, p1@M17653, p1@M27369, p1@S82064, p1@X04940, p1@X04946, p1@X92766, p1@X92783, p1@X92883 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr18:56816533..56816576,+#_1269e137f4ffd8d8038a1a1cc9189d08 | p@chr18:56816533..56816576, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr14:82495120..82495125,-#_1269e137f4ffd8d8038a1a1cc9189d08 | p@chr14:82495120..82495125, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr6:100604462..100604467,-#_1269e137f4ffd8d8038a1a1cc9189d08 | p@chr6:100604462..100604467, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr11:118075251..118075262,-#_1269e137f4ffd8d8038a1a1cc9189d08 | p7@AMICA1 |
| 5.42e-195 | FFCP PHASE2:Hg19::chr13:50802126..50802138,+#_1269e137f4ffd8d8038a1a1cc9189d08 | p@chr13:50802126..50802138, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr11:118075251..118075262,-#_1269e137f4ffd8d8038a1a1cc9189d08 | p7@AMICA1 |
| 5.42e-195 | FFCP PHASE2:Hg19::chr1:93043060..93043065,-#_1269e137f4ffd8d8038a1a1cc9189d08 | p@chr1:93043060..93043065, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr14:82495120..82495125,-#_1269e137f4ffd8d8038a1a1cc9189d08 | p@chr14:82495120..82495125, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr14:22356128..22356162,+#_93b5fd97867e98a558b3ebc157aaf2e5 | p4@TRAV12-2 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr1:93043161..93043170,-#_93b5fd97867e98a558b3ebc157aaf2e5 | p@chr1:93043161..93043170, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr14:22356128..22356162,+#_93b5fd97867e98a558b3ebc157aaf2e5 | p4@TRAV12-2 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr6:128134176..128134183,-#_93b5fd97867e98a558b3ebc157aaf2e5 | p10@THEMIS |
| 9.37e-99 | FFCP PHASE1:Hg19::chr1:93043161..93043170,-#_93b5fd97867e98a558b3ebc157aaf2e5 | p@chr1:93043161..93043170, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr9:92116537..92116544,-#_93b5fd97867e98a558b3ebc157aaf2e5 | p@chr9:92116537..92116544, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr6:128134176..128134183,-#_93b5fd97867e98a558b3ebc157aaf2e5 | p10@THEMIS |
| 9.37e-99 | FFCP PHASE1:Hg19::chr9:92116537..92116544,-#_93b5fd97867e98a558b3ebc157aaf2e5 | p@chr9:92116537..92116544, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr6:31541408..31541421,+#_9d718e9c4818082c42ee81d2f447370a | p@chr6:31541408..31541421, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr17:32686417..32686426,-#_9d718e9c4818082c42ee81d2f447370a | p@chr17:32686417..32686426, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr6:6649384..6649391,-#_9d718e9c4818082c42ee81d2f447370a | p@chr6:6649384..6649391, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr5:68290599..68290607,-#_9d718e9c4818082c42ee81d2f447370a | p@chr5:68290599..68290607, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr8:29327513..29327519,+#_9d718e9c4818082c42ee81d2f447370a | p@chr8:29327513..29327519, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr12:68619421..68619426,-#_9d718e9c4818082c42ee81d2f447370a | p5@IL26 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr9:36903715..36903727,-#_9d718e9c4818082c42ee81d2f447370a | p@chr9:36903715..36903727, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr6:31541408..31541421,+#_9d718e9c4818082c42ee81d2f447370a | p@chr6:31541408..31541421, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr5:45161715..45161717,+#_9d718e9c4818082c42ee81d2f447370a | p@chr5:45161715..45161717, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr12:68658423..68658430,+#_9d718e9c4818082c42ee81d2f447370a | p@chr12:68658423..68658430, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr8:124008167..124008169,+#_9d718e9c4818082c42ee81d2f447370a | p@chr8:124008167..124008169, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr5:68290599..68290607,-#_9d718e9c4818082c42ee81d2f447370a | p@chr5:68290599..68290607, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr11:67256355..67256383,+#_9d718e9c4818082c42ee81d2f447370a | p3@AIP |
| 2.55e-98 | FFCP PHASE1:Hg19::chr9:36903715..36903727,-#_9d718e9c4818082c42ee81d2f447370a | p@chr9:36903715..36903727, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr2:53318401..53318420,-#_9d718e9c4818082c42ee81d2f447370a | p@chr2:53318401..53318420, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr12:68619448..68619455,-#_9d718e9c4818082c42ee81d2f447370a | p4@IL26 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr11:67256355..67256383,+#_9d718e9c4818082c42ee81d2f447370a | p3@AIP |
| 2.55e-98 | FFCP PHASE1:Hg19::chr5:45161715..45161717,+#_9d718e9c4818082c42ee81d2f447370a | p@chr5:45161715..45161717, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr2:127790367..127790404,+#_9d718e9c4818082c42ee81d2f447370a | p@chr2:127790367..127790404, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr8:124008167..124008169,+#_9d718e9c4818082c42ee81d2f447370a | p@chr8:124008167..124008169, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr2:53318401..53318420,-#_9d718e9c4818082c42ee81d2f447370a | p@chr2:53318401..53318420, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr12:68619421..68619426,-#_9d718e9c4818082c42ee81d2f447370a | p5@IL26 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr2:127790367..127790404,+#_9d718e9c4818082c42ee81d2f447370a | p@chr2:127790367..127790404, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr6:6649339..6649349,-#_9d718e9c4818082c42ee81d2f447370a | p@chr6:6649339..6649349, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr12:68658423..68658430,+#_9d718e9c4818082c42ee81d2f447370a | p@chr12:68658423..68658430, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr20:10092229..10092265,-#_9d718e9c4818082c42ee81d2f447370a | p@chr20:10092229..10092265, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr12:68619448..68619455,-#_9d718e9c4818082c42ee81d2f447370a | p4@IL26 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr6:6649339..6649349,-#_9d718e9c4818082c42ee81d2f447370a | p@chr6:6649339..6649349, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr6:6649384..6649391,-#_9d718e9c4818082c42ee81d2f447370a | p@chr6:6649384..6649391, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr8:29327513..29327519,+#_9d718e9c4818082c42ee81d2f447370a | p@chr8:29327513..29327519, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr17:32686417..32686426,-#_9d718e9c4818082c42ee81d2f447370a | p@chr17:32686417..32686426, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr20:10092229..10092265,-#_9d718e9c4818082c42ee81d2f447370a | p@chr20:10092229..10092265, - |
| 1.23e-66 | FFCP PHASE1:Hg19::chr9:92116561..92116575,-#_39957211e15bf23c0971fb284628f260 | p@chr9:92116561..92116575, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr1:93043102..93043113,-#_39957211e15bf23c0971fb284628f260 | p@chr1:93043102..93043113, - |
| 1.23e-66 | FFCP PHASE1:Hg19::chr3:140980521..140980532,+#_39957211e15bf23c0971fb284628f260 | p9@ACPL2 |
| 1.23e-66 | FFCP PHASE1:Hg19::chr13:40881048..40881070,-#_39957211e15bf23c0971fb284628f260 | p@chr13:40881048..40881070, - |
| 1.23e-66 | FFCP PHASE1:Hg19::chr20:44692500..44692506,-#_39957211e15bf23c0971fb284628f260 | p@chr20:44692500..44692506, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr16:11301790..11301804,+#_39957211e15bf23c0971fb284628f260 | p1@AK127887 |
| 1.23e-66 | FFCP PHASE1:Hg19::chr1:93043102..93043113,-#_39957211e15bf23c0971fb284628f260 | p@chr1:93043102..93043113, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr21:36430055..36430067,+#_39957211e15bf23c0971fb284628f260 | p@chr21:36430055..36430067, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr11:73720276..73720286,-#_39957211e15bf23c0971fb284628f260 | p2@UCP3 |
| 1.23e-66 | FFCP PHASE1:Hg19::chr16:11301790..11301804,+#_39957211e15bf23c0971fb284628f260 | p1@AK127887 |
| 1.23e-66 | FFCP PHASE2:Hg19::chr16:11301814..11301825,+#_39957211e15bf23c0971fb284628f260 | p2@AK127887 |
| 1.23e-66 | FFCP PHASE2:Hg19::chr13:40880982..40881019,-#_39957211e15bf23c0971fb284628f260 | p@chr13:40880982..40881019, - |
| 1.23e-66 | FFCP PHASE1:Hg19::chr11:73720276..73720286,-#_39957211e15bf23c0971fb284628f260 | p2@UCP3 |
| 1.23e-66 | FFCP PHASE1:Hg19::chr21:36430055..36430067,+#_39957211e15bf23c0971fb284628f260 | p@chr21:36430055..36430067, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr16:11301814..11301825,+#_39957211e15bf23c0971fb284628f260 | p2@AK127887 |
| 1.23e-66 | FFCP PHASE2:Hg19::chr13:40881048..40881070,-#_39957211e15bf23c0971fb284628f260 | p@chr13:40881048..40881070, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr9:92116561..92116575,-#_39957211e15bf23c0971fb284628f260 | p@chr9:92116561..92116575, - |
| 1.23e-66 | FFCP PHASE1:Hg19::chr13:40880982..40881019,-#_39957211e15bf23c0971fb284628f260 | p@chr13:40880982..40881019, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr20:44692500..44692506,-#_39957211e15bf23c0971fb284628f260 | p@chr20:44692500..44692506, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr3:140980521..140980532,+#_39957211e15bf23c0971fb284628f260 | p9@ACPL2 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr2:106407366..106407377,-#_b475eb48e85384b62a7a13950c75948e | p@chr2:106407366..106407377, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr16:11076917..11076920,-#_b475eb48e85384b62a7a13950c75948e | p@chr16:11076917..11076920, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr19:47598056..47598065,-#_b475eb48e85384b62a7a13950c75948e | p@chr19:47598056..47598065, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr1:209897512..209897518,-#_b475eb48e85384b62a7a13950c75948e | p1@ENST00000441672 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr2:106407366..106407377,-#_b475eb48e85384b62a7a13950c75948e | p@chr2:106407366..106407377, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr19:47598056..47598065,-#_b475eb48e85384b62a7a13950c75948e | p@chr19:47598056..47598065, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr8:26449449..26449465,+#_b475eb48e85384b62a7a13950c75948e | p@chr8:26449449..26449465, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr8:26449449..26449465,+#_b475eb48e85384b62a7a13950c75948e | p@chr8:26449449..26449465, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr6:31540746..31540753,+#_b475eb48e85384b62a7a13950c75948e | p10@LTA |
| 2.39e-66 | FFCP PHASE2:Hg19::chr2:74517994..74518001,-#_b475eb48e85384b62a7a13950c75948e | p12@SLC4A5 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr6:31540746..31540753,+#_b475eb48e85384b62a7a13950c75948e | p10@LTA |
| 2.39e-66 | FFCP PHASE2:Hg19::chr16:11076917..11076920,-#_b475eb48e85384b62a7a13950c75948e | p@chr16:11076917..11076920, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr2:74517994..74518001,-#_b475eb48e85384b62a7a13950c75948e | p12@SLC4A5 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr1:209897512..209897518,-#_b475eb48e85384b62a7a13950c75948e | p1@ENST00000441672 |
| 4.66e-66 | FFCP PHASE2:Hg19::chr16:72863895..72863905,-#_d30b69b5e17517db069f7c4be32d595d | p@chr16:72863895..72863905, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr8:126171283..126171303,+#_d30b69b5e17517db069f7c4be32d595d | p@chr8:126171283..126171303, + |
