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{{DOID
{{DOID
|id=DOID:3565
|alt_id=DOID:1137;;DOID:3554;;DOID:3567;;DOID:4750
|name=meningioma
|namespace=
|def="A central nervous system cancer that are manifested in the central nervous system and arise from the arachnoid \"cap\" cells of the arachnoid villi in the meninges." [url:http\://en.wikipedia.org/wiki/Meningioma]
|xref=
|is_a=DOID:3620
|synonym="intracranial meningioma" EXACT [];;"intracranial meningioma (disorder)" EXACT [SNOMEDCT_2005_07_31:302820008];;"meningeal neoplasm" EXACT [];;"meningioma" EXACT [CSP2005:2012-5515];;"meningioma" EXACT [MTH:NOCODE];;"meningioma NOS" EXACT [SNOMEDCT_2005_07_31:189941000];;"meningioma NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189945009];;"meningioma, benign, no ICD-O subtype (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:19453003];;"meningiomas (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189940004];;"meningothelial cell tumor" EXACT [];;"neoplasm of meninges" EXACT [SNOMEDCT_2005_07_31:126965008];;"neoplasm of the meninges" EXACT [NCI2004_11_17:C3229];;"primary Meningeal tumor" EXACT [NCI2004_11_17:C6971];;"supratentorial meningioma" EXACT []
|comment=
|comment=
|alt_id=DOID:1137;;DOID:3554;;DOID:3567;;DOID:4750
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A central nervous system cancer that are manifested in the central nervous system and arise from the arachnoid \"cap\" cells of the arachnoid villi in the meninges." [url:http://en.wikipedia.org/wiki/Meningioma]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=DOID:3565
|is_a=DOID:3620
|is_obsolete=
|located_in=
|located_in=
|name=meningioma
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|subset=
|synonym="intracranial meningioma" EXACT [];;"intracranial meningioma (disorder)" EXACT [SNOMEDCT_2005_07_31:302820008];;"meningeal neoplasm" EXACT [];;"meningioma" EXACT [MTH:NOCODE];;"meningioma" EXACT [CSP2005:2012-5515];;"meningioma NOS" EXACT [SNOMEDCT_2005_07_31:189941000];;"meningioma NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189945009];;"meningioma, benign, no ICD-O subtype (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:19453003];;"meningiomas (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189940004];;"meningothelial cell tumor" EXACT [];;"neoplasm of meninges" EXACT [SNOMEDCT_2005_07_31:126965008];;"neoplasm of the meninges" EXACT [NCI2004_11_17:C3229];;"primary Meningeal tumor" EXACT [NCI2004_11_17:C6971];;"supratentorial meningioma" EXACT []
|union_of=
|xref=MSH:D008577;;NCI:C3229;;SNOMEDCT_2010_1_31:126965008;;SNOMEDCT_2010_1_31:127579001;;SNOMEDCT_2010_1_31:134307003;;SNOMEDCT_2010_1_31:154621002;;SNOMEDCT_2010_1_31:189940004;;SNOMEDCT_2010_1_31:189941000;;SNOMEDCT_2010_1_31:189945009;;SNOMEDCT_2010_1_31:269643009;;SNOMEDCT_2010_1_31:302820008;;SNOMEDCT_2010_1_31:393566004;;UMLS_CUI:C0025284;;UMLS_CUI:C0025286;;UMLS_CUI:C0349604;;UMLS_CUI:C1334698;;UMLS_CUI:C1336537
}}
}}

Latest revision as of 16:50, 12 September 2014

Name:meningioma
Namespace:FANTOM
Definition:"A central nervous system cancer that are manifested in the central nervous system and arise from the arachnoid \"cap\" cells of the arachnoid villi in the meninges." [url:http://en.wikipedia.org/wiki/Meningioma]
Xrefs:
links:

MSH:D008577
NCI:C3229
SNOMEDCT_2010_1_31:126965008
SNOMEDCT_2010_1_31:127579001
SNOMEDCT_2010_1_31:134307003
SNOMEDCT_2010_1_31:154621002
SNOMEDCT_2010_1_31:189940004
SNOMEDCT_2010_1_31:189941000
SNOMEDCT_2010_1_31:189945009
SNOMEDCT_2010_1_31:269643009
SNOMEDCT_2010_1_31:302820008
SNOMEDCT_2010_1_31:393566004
UMLS_CUI:C0025284
UMLS_CUI:C0025286
UMLS_CUI:C0349604
UMLS_CUI:C1334698

UMLS_CUI:C1336537
Synonyms: "intracranial meningioma" EXACT []
"intracranial meningioma (disorder)" EXACT [SNOMEDCT_2005_07_31:302820008]
"meningeal neoplasm" EXACT []
"meningioma" EXACT [MTH:NOCODE]
"meningioma" EXACT [CSP2005:2012-5515]
"meningioma NOS" EXACT [SNOMEDCT_2005_07_31:189941000]
"meningioma NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189945009]
"meningioma, benign, no ICD-O subtype (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:19453003]
"meningiomas (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189940004]
"meningothelial cell tumor" EXACT []
"neoplasm of meninges" EXACT [SNOMEDCT_2005_07_31:126965008]
"neoplasm of the meninges" EXACT [NCI2004_11_17:C3229]
"primary Meningeal tumor" EXACT [NCI2004_11_17:C6971]
"supratentorial meningioma" EXACT []
Alt_id: DOID:1137
DOID:3554
DOID:3567
DOID:4750

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:3620(central nervous system cancer)



Children
NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

Mouse (Mus musculus)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3565 (meningioma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE1:Hg19::chr10:45295885..45295915,-#_f81073edaf0f5c5d67a821f09c65ff4cp@chr10:45295885..45295915, -
5.42e-195FFCP PHASE2:Hg19::chr10:45295885..45295915,-#_f81073edaf0f5c5d67a821f09c65ff4cp@chr10:45295885..45295915, -
9.37e-99FFCP PHASE1:Hg19::chr12:12094754..12094758,+#_4f985f864aba8a0569b242c866b8f5c9p@chr12:12094754..12094758, +
9.37e-99FFCP PHASE2:Hg19::chr12:12094754..12094758,+#_4f985f864aba8a0569b242c866b8f5c9p@chr12:12094754..12094758, +
1.23e-66FFCP PHASE1:Hg19::chr2:235107734..235107745,-#_158e8c504840797829e6127a6113ddb4p@chr2:235107734..235107745, -
1.23e-66FFCP PHASE2:Hg19::chr2:235107734..235107745,-#_158e8c504840797829e6127a6113ddb4p@chr2:235107734..235107745, -
2.39e-66FFCP PHASE1:Hg19::chr2:135170027..135170035,+#_17b150a3d7a45a04ac021f6e882d67bbp@chr2:135170027..135170035, +
2.39e-66FFCP PHASE2:Hg19::chr2:135170027..135170035,+#_17b150a3d7a45a04ac021f6e882d67bbp@chr2:135170027..135170035, +
4.66e-66FFCP PHASE1:Hg19::chr1:8251750..8251759,+#_b3bca1738f694c797a6e538785e1266ap@chr1:8251750..8251759, +
4.66e-66FFCP PHASE2:Hg19::chr1:8251750..8251759,+#_b3bca1738f694c797a6e538785e1266ap@chr1:8251750..8251759, +
1.46e-50FFCP PHASE2:Hg19::chr12:31158902..31158914,-#_04b031f1067b407a7f58d43d61e972b9p2@ENST00000544329
1.46e-50FFCP PHASE1:Hg19::chr5:174151841..174151852,+#_04b031f1067b407a7f58d43d61e972b9p7@MSX2
1.46e-50FFCP PHASE2:Hg19::chr5:174151841..174151852,+#_04b031f1067b407a7f58d43d61e972b9p7@MSX2
1.46e-50FFCP PHASE1:Hg19::chr12:31158902..31158914,-#_04b031f1067b407a7f58d43d61e972b9p2@ENST00000544329
1.46e-50FFCP PHASE1:Hg19::chr2:113668763..113668773,+#_04b031f1067b407a7f58d43d61e972b9p@chr2:113668763..113668773, +
1.46e-50FFCP PHASE2:Hg19::chr2:113668763..113668773,+#_04b031f1067b407a7f58d43d61e972b9p@chr2:113668763..113668773, +
2.42e-50FFCP PHASE1:Hg19::chr12:52698999..52699008,+#_d2524fbd858c8cfba307d536b3f0f425p@chr12:52698999..52699008, +
2.42e-50FFCP PHASE2:Hg19::chr12:52698999..52699008,+#_d2524fbd858c8cfba307d536b3f0f425p@chr12:52698999..52699008, +
6.62e-41FFCP PHASE1:Hg19::chr7:142563227..142563251,+#_376571df9581e29b49cfa911294a5338p@chr7:142563227..142563251, +
6.62e-41FFCP PHASE2:Hg19::chr7:142563227..142563251,+#_376571df9581e29b49cfa911294a5338p@chr7:142563227..142563251, +
9.91e-41FFCP PHASE1:Hg19::chr16:86612112..86612123,+#_dccb6758ca156ff9c217263afc3d784dp5@FOXL1
9.91e-41FFCP PHASE2:Hg19::chr16:86612112..86612123,+#_dccb6758ca156ff9c217263afc3d784dp5@FOXL1
1.48e-40FFCP PHASE2:Hg19::chr12:52679917..52679933,-#_9ea0881ef7191a0c31581976dd47d13ep@chr12:52679917..52679933, -
1.48e-40FFCP PHASE1:Hg19::chr12:52679917..52679933,-#_9ea0881ef7191a0c31581976dd47d13ep@chr12:52679917..52679933, -
2.21e-40FFCP PHASE1:Hg19::chr19:41447981..41448001,+#_c9e0492af7cc023b7aa4c2cbf1b0e05fp@chr19:41447981..41448001, +
2.21e-40FFCP PHASE2:Hg19::chr19:41447981..41448001,+#_c9e0492af7cc023b7aa4c2cbf1b0e05fp@chr19:41447981..41448001, +
2.21e-40FFCP PHASE1:Hg19::chr17:22069559..22069568,-#_c9e0492af7cc023b7aa4c2cbf1b0e05fp@chr17:22069559..22069568, -
2.21e-40FFCP PHASE2:Hg19::chr17:22069559..22069568,-#_c9e0492af7cc023b7aa4c2cbf1b0e05fp@chr17:22069559..22069568, -
2.58e-34FFCP PHASE2:Hg19::chr15:69339407..69339410,+#_f4b1c9051d2f2c1583f7a6cfd1ba2e3bp3@NOX5
2.58e-34FFCP PHASE1:Hg19::chr15:69339407..69339410,+#_f4b1c9051d2f2c1583f7a6cfd1ba2e3bp3@NOX5
3.61e-34FFCP PHASE1:Hg19::chr16:83033869..83033872,+#_69309b1b0dd30467ee4cb1ec9b5d58ffp@chr16:83033869..83033872, +
3.61e-34FFCP PHASE2:Hg19::chr16:83033869..83033872,+#_69309b1b0dd30467ee4cb1ec9b5d58ffp@chr16:83033869..83033872, +
5.05e-34FFCP PHASE1:Hg19::chr2:113562551..113562554,-#_9a072809d151cd922ef825a3abac0d83p@chr2:113562551..113562554, -
5.05e-34FFCP PHASE2:Hg19::chr2:113562551..113562554,-#_9a072809d151cd922ef825a3abac0d83p@chr2:113562551..113562554, -
7.06e-34FFCP PHASE1:Hg19::chr7:3284005..3284016,-#_9c6a3b43f558a3218de2b40265edc64dp@chr7:3284005..3284016, -
7.06e-34FFCP PHASE2:Hg19::chr7:3284005..3284016,-#_9c6a3b43f558a3218de2b40265edc64dp@chr7:3284005..3284016, -
7.06e-34FFCP PHASE1:Hg19::chr17:30059110..30059117,+#_9c6a3b43f558a3218de2b40265edc64dp@chr17:30059110..30059117, +
7.06e-34FFCP PHASE2:Hg19::chr17:30059110..30059117,+#_9c6a3b43f558a3218de2b40265edc64dp@chr17:30059110..30059117, +
7.06e-34FFCP PHASE1:Hg19::chr20:50245629..50245639,-#_9c6a3b43f558a3218de2b40265edc64dp@chr20:50245629..50245639, -
7.06e-34FFCP PHASE2:Hg19::chr20:50245629..50245639,-#_9c6a3b43f558a3218de2b40265edc64dp@chr20:50245629..50245639, -
7.06e-34FFCP PHASE1:Hg19::chr18:60262589..60262593,+#_9c6a3b43f558a3218de2b40265edc64dp@chr18:60262589..60262593, +
7.06e-34FFCP PHASE2:Hg19::chr18:60262589..60262593,+#_9c6a3b43f558a3218de2b40265edc64dp@chr18:60262589..60262593, +
9.85e-34FFCP PHASE1:Hg19::chr9:127635073..127635077,+#_b3c9e7b0fa35512fe5693336aa2603e4p7@ARPC5L
9.85e-34FFCP PHASE2:Hg19::chr9:127635073..127635077,+#_b3c9e7b0fa35512fe5693336aa2603e4p7@ARPC5L
7.48e-30FFCP PHASE1:Hg19::chr22:33265699..33265702,+#_c2218aa925d065a2bd5551377ce0a348p@chr22:33265699..33265702, +
7.48e-30FFCP PHASE2:Hg19::chr22:33265699..33265702,+#_c2218aa925d065a2bd5551377ce0a348p@chr22:33265699..33265702, +
9.99e-30FFCP PHASE1:Hg19::chr16:83371254..83371258,+#_00e31f1d93339a1107914a20e7a28815p@chr16:83371254..83371258, +
9.99e-30FFCP PHASE2:Hg19::chr16:83371254..83371258,+#_00e31f1d93339a1107914a20e7a28815p@chr16:83371254..83371258, +
2.37e-29FFCP PHASE1:Hg19::chr5:1882184..1882203,-#_3c2756e1160e9dcbe5e9047643ecee6ap4@IRX4
2.37e-29FFCP PHASE2:Hg19::chr5:1882184..1882203,-#_3c2756e1160e9dcbe5e9047643ecee6ap4@IRX4
3.16e-29FFCP PHASE1:Hg19::chr19:28936188..28936202,+#_af53c30e853674cc2ccf3ccf72529de0p@chr19:28936188..28936202, +
3.16e-29FFCP PHASE2:Hg19::chr19:28936188..28936202,+#_af53c30e853674cc2ccf3ccf72529de0p@chr19:28936188..28936202, +
4.2e-29FFCP PHASE1:Hg19::chr21:43771226..43771242,-#_5d33762a4fd5281a6e74d7940df95958p3@TFF2
4.2e-29FFCP PHASE2:Hg19::chr21:43771226..43771242,-#_5d33762a4fd5281a6e74d7940df95958p3@TFF2
2.16e-26FFCP PHASE1:Hg19::chr6:31304866..31304870,-#_436b8552d6fa8971fb552b5320ff1991p@chr6:31304866..31304870, -
2.16e-26FFCP PHASE2:Hg19::chr6:31304866..31304870,-#_436b8552d6fa8971fb552b5320ff1991p@chr6:31304866..31304870, -
2.78e-26FFCP PHASE1:Hg19::chr20:49983328..49983340,+#_ddc103da0e07fa5f48d4d4fe53c55dabp@chr20:49983328..49983340, +
2.78e-26FFCP PHASE2:Hg19::chr20:49983328..49983340,+#_ddc103da0e07fa5f48d4d4fe53c55dabp@chr20:49983328..49983340, +
3.58e-26FFCP PHASE2:Hg19::chr11:121910956..121910960,-#_f004c3f21bd06245839a61420469b5d9p@chr11:121910956..121910960, -
3.58e-26FFCP PHASE1:Hg19::chr11:121910956..121910960,-#_f004c3f21bd06245839a61420469b5d9p@chr11:121910956..121910960, -
4.61e-26FFCP PHASE1:Hg19::chr9:21468453..21468457,-#_d1ca2c251e96171bac2dcfc269ebe9acp@chr9:21468453..21468457, -
4.61e-26FFCP PHASE2:Hg19::chr9:21468453..21468457,-#_d1ca2c251e96171bac2dcfc269ebe9acp@chr9:21468453..21468457, -
5.93e-26FFCP PHASE1:Hg19::chr1:91328490..91328494,-#_ddfc802cb57992783e36c9d737f5b213p@chr1:91328490..91328494, -
5.93e-26FFCP PHASE2:Hg19::chr1:91328490..91328494,-#_ddfc802cb57992783e36c9d737f5b213p@chr1:91328490..91328494, -
9.79e-26FFCP PHASE1:Hg19::chr6:31815396..31815402,+#_dc4f57855183ac7e500a995f4567a5a0p@chr6:31815396..31815402, +
9.79e-26FFCP PHASE2:Hg19::chr6:31815396..31815402,+#_dc4f57855183ac7e500a995f4567a5a0p@chr6:31815396..31815402, +
9.79e-26FFCP PHASE2:Hg19::chr11:10066159..10066186,-#_dc4f57855183ac7e500a995f4567a5a0p3@SBF2
9.79e-26FFCP PHASE1:Hg19::chr11:10066159..10066186,-#_dc4f57855183ac7e500a995f4567a5a0p3@SBF2
1.26e-25FFCP PHASE2:Hg19::chr2:135170403..135170416,+#_eb357d3f105d9c19199a09d1f2a35266p@chr2:135170403..135170416, +
1.26e-25FFCP PHASE1:Hg19::chr2:135170403..135170416,+#_eb357d3f105d9c19199a09d1f2a35266p@chr2:135170403..135170416, +
1.07e-23FFCP PHASE2:Hg19::chr14:65823553..65823594,+#_61f92c5ce5f2060a87c7fb067a38e46bp@chr14:65823553..65823594, +
1.07e-23FFCP PHASE1:Hg19::chr7:142558870..142558879,-#_61f92c5ce5f2060a87c7fb067a38e46bp@chr7:142558870..142558879, -
1.07e-23FFCP PHASE2:Hg19::chr7:142558870..142558879,-#_61f92c5ce5f2060a87c7fb067a38e46bp@chr7:142558870..142558879, -
1.07e-23FFCP PHASE1:Hg19::chr14:65823553..65823594,+#_61f92c5ce5f2060a87c7fb067a38e46bp@chr14:65823553..65823594, +
1.34e-23FFCP PHASE1:Hg19::chr14:102704175..102704202,-#_fce75743c013ff7a664518935d0695a4p@chr14:102704175..102704202, -
1.34e-23FFCP PHASE2:Hg19::chr14:102704175..102704202,-#_fce75743c013ff7a664518935d0695a4p@chr14:102704175..102704202, -
2.62e-23FFCP PHASE1:Hg19::chr11:1213314..1213323,+#_bff684d21272c2b88234812aa07a97b8p7@uc001lsz.2
2.62e-23FFCP PHASE2:Hg19::chr11:1213314..1213323,+#_bff684d21272c2b88234812aa07a97b8p7@uc001lsz.2
4.1e-23FFCP PHASE2:Hg19::chr15:101445820..101445832,-#_37cb41e7baa78526a0af879a1a511c85p@chr15:101445820..101445832, -
4.1e-23FFCP PHASE1:Hg19::chr1:33608427..33608437,-#_37cb41e7baa78526a0af879a1a511c85p2@uc001bxa.1
4.1e-23FFCP PHASE2:Hg19::chr1:33608427..33608437,-#_37cb41e7baa78526a0af879a1a511c85p2@uc001bxa.1
4.1e-23FFCP PHASE1:Hg19::chr14:102704788..102704801,-#_37cb41e7baa78526a0af879a1a511c85p10@MOK
4.1e-23FFCP PHASE1:Hg19::chr15:101445820..101445832,-#_37cb41e7baa78526a0af879a1a511c85p@chr15:101445820..101445832, -
4.1e-23FFCP PHASE2:Hg19::chr14:102704788..102704801,-#_37cb41e7baa78526a0af879a1a511c85p10@MOK
6.4e-23FFCP PHASE2:Hg19::chr11:119461966..119461970,+#_f88af8662fe004f538c647c365fd0c28p@chr11:119461966..119461970, +
6.4e-23FFCP PHASE1:Hg19::chr11:119461966..119461970,+#_f88af8662fe004f538c647c365fd0c28p@chr11:119461966..119461970, +
1.53e-21FFCP PHASE1:Hg19::chr1:20407255..20407264,+#_3b2e398643256720dae58e07984cdb12p@chr1:20407255..20407264, +
1.53e-21FFCP PHASE1:Hg19::chr2:126569768..126569794,+#_3b2e398643256720dae58e07984cdb12p@chr2:126569768..126569794, +
1.53e-21FFCP PHASE2:Hg19::chr1:20407255..20407264,+#_3b2e398643256720dae58e07984cdb12p@chr1:20407255..20407264, +
1.53e-21FFCP PHASE1:Hg19::chr12:52680234..52680245,-#_3b2e398643256720dae58e07984cdb12p@chr12:52680234..52680245, -
1.53e-21FFCP PHASE2:Hg19::chr2:126569768..126569794,+#_3b2e398643256720dae58e07984cdb12p@chr2:126569768..126569794, +
1.53e-21FFCP PHASE1:Hg19::chr12:52681676..52681679,-#_3b2e398643256720dae58e07984cdb12p6@KRT81
1.53e-21FFCP PHASE2:Hg19::chr12:52680234..52680245,-#_3b2e398643256720dae58e07984cdb12p@chr12:52680234..52680245, -
1.53e-21FFCP PHASE2:Hg19::chr12:52681676..52681679,-#_3b2e398643256720dae58e07984cdb12p6@KRT81
1.88e-21FFCP PHASE1:Hg19::chr3:111631881..111631893,+#_acd72307ed985ae67220de1dfbcae1d1p@chr3:111631881..111631893, +
1.88e-21FFCP PHASE2:Hg19::chr3:111631881..111631893,+#_acd72307ed985ae67220de1dfbcae1d1p@chr3:111631881..111631893, +
2.3e-21FFCP PHASE2:Hg19::chr11:329487..329504,-#_2a364669b33c25169f1e9e9e7d4ae617p@chr11:329487..329504, -
2.3e-21FFCP PHASE1:Hg19::chr22:28329197..28329214,-#_2a364669b33c25169f1e9e9e7d4ae617p@chr22:28329197..28329214, -
2.3e-21FFCP PHASE1:Hg19::chr11:329487..329504,-#_2a364669b33c25169f1e9e9e7d4ae617p@chr11:329487..329504, -
2.3e-21FFCP PHASE2:Hg19::chr22:28329197..28329214,-#_2a364669b33c25169f1e9e9e7d4ae617p@chr22:28329197..28329214, -

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