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{{DOID
{{DOID
|id=DOID:4556
|alt_id=
|name=lung large cell carcinoma
|namespace=disease_ontology
|def=
|xref=NCI:C4450;;SNOMEDCT_2010_1_31:254629004;;UMLS_CUI:C0345958
|is_a=DOID:3908
|synonym="large cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254629004];;"large cell lung carcinoma" EXACT [NCI2004_11_17:C4450]
|comment=
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|disjoint_from=
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|id=DOID:4556
|is_a=DOID:3908
|is_obsolete=
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|name=lung large cell carcinoma
|namespace=FANTOM
|obo_creation_date=
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|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|is_obsolete=
|subset=
|preceded_by=
|synonym="large cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254629004];;"large cell lung carcinoma" EXACT [NCI2004_11_17:C4450]
|union_of=
|xref=NCI:C4450;;SNOMEDCT_2010_1_31:254629004;;UMLS_CUI:C0345958
}}
}}

Latest revision as of 16:51, 12 September 2014

Name:lung large cell carcinoma
Namespace:FANTOM
Xrefs:
links:

NCI:C4450
SNOMEDCT_2010_1_31:254629004

UMLS_CUI:C0345958
Synonyms: "large cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254629004]
"large cell lung carcinoma" EXACT [NCI2004_11_17:C4450]

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:3908(non-small cell lung carcinoma)



Children
NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

Mouse (Mus musculus)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:4556 (lung large cell carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
2.39e-66FFCP PHASE2:Hg19::chr5:5558678..5558683,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr5:5558678..5558683, +
2.39e-66FFCP PHASE1:Hg19::chr7:68735132..68735135,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr7:68735132..68735135, +
2.39e-66FFCP PHASE1:Hg19::chr18:67563022..67563032,-#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr18:67563022..67563032, -
2.39e-66FFCP PHASE1:Hg19::chr3:63804973..63804980,+#_8c53dfa338c1f42c40ac518e5ae62d6ap3@C3orf49
2.39e-66FFCP PHASE2:Hg19::chrX:105065622..105065627,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chrX:105065622..105065627, +
2.39e-66FFCP PHASE2:Hg19::chr7:158242968..158242975,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr7:158242968..158242975, +
2.39e-66FFCP PHASE2:Hg19::chr8:129431377..129431384,-#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr8:129431377..129431384, -
2.39e-66FFCP PHASE2:Hg19::chr9:138393225..138393257,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr9:138393225..138393257, +
2.39e-66FFCP PHASE2:Hg19::chr7:68735137..68735150,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr7:68735137..68735150, +
2.39e-66FFCP PHASE1:Hg19::chr2:75145327..75145329,+#_8c53dfa338c1f42c40ac518e5ae62d6ap9@ENST00000435984
2.39e-66FFCP PHASE2:Hg19::chr21:11130568..11130575,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr21:11130568..11130575, +
2.39e-66FFCP PHASE2:Hg19::chr1:188856517..188856523,-#_8c53dfa338c1f42c40ac518e5ae62d6ap1@ENST00000414765
2.39e-66FFCP PHASE2:Hg19::chr6:22113639..22113643,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr6:22113639..22113643, +
2.39e-66FFCP PHASE2:Hg19::chr1:234565260..234565271,-#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr1:234565260..234565271, -
2.39e-66FFCP PHASE1:Hg19::chr7:158242968..158242975,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr7:158242968..158242975, +
2.39e-66FFCP PHASE2:Hg19::chr1:68927028..68927036,-#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr1:68927028..68927036, -
2.39e-66FFCP PHASE2:Hg19::chr3:63805044..63805054,+#_8c53dfa338c1f42c40ac518e5ae62d6ap1@C3orf49
2.39e-66FFCP PHASE2:Hg19::chr7:151169194..151169198,-#_8c53dfa338c1f42c40ac518e5ae62d6ap17@RHEB
2.39e-66FFCP PHASE1:Hg19::chr15:91143571..91143582,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr15:91143571..91143582, +
2.39e-66FFCP PHASE2:Hg19::chr1:188861179..188861222,-#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr1:188861179..188861222, -
2.39e-66FFCP PHASE1:Hg19::chr21:11130568..11130575,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr21:11130568..11130575, +
2.39e-66FFCP PHASE2:Hg19::chr2:33589897..33589917,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr2:33589897..33589917, +
2.39e-66FFCP PHASE1:Hg19::chr1:188857554..188857562,-#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr1:188857554..188857562, -
2.39e-66FFCP PHASE1:Hg19::chr3:26426173..26426176,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr3:26426173..26426176, +
2.39e-66FFCP PHASE1:Hg19::chr6:22113639..22113643,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr6:22113639..22113643, +
2.39e-66FFCP PHASE1:Hg19::chrX:105065622..105065627,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chrX:105065622..105065627, +
2.39e-66FFCP PHASE1:Hg19::chr7:151169194..151169198,-#_8c53dfa338c1f42c40ac518e5ae62d6ap17@RHEB
2.39e-66FFCP PHASE1:Hg19::chr5:5558678..5558683,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr5:5558678..5558683, +
2.39e-66FFCP PHASE1:Hg19::chr1:68927028..68927036,-#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr1:68927028..68927036, -
2.39e-66FFCP PHASE2:Hg19::chr15:91143571..91143582,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr15:91143571..91143582, +
2.39e-66FFCP PHASE2:Hg19::chr7:68735214..68735224,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr7:68735214..68735224, +
2.39e-66FFCP PHASE2:Hg19::chr1:188856567..188856573,-#_8c53dfa338c1f42c40ac518e5ae62d6ap2@ENST00000414765
2.39e-66FFCP PHASE2:Hg19::chr12:75174802..75174809,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr12:75174802..75174809, +
2.39e-66FFCP PHASE1:Hg19::chr2:33589897..33589917,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr2:33589897..33589917, +
2.39e-66FFCP PHASE1:Hg19::chr8:129431377..129431384,-#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr8:129431377..129431384, -
2.39e-66FFCP PHASE1:Hg19::chr9:138393225..138393257,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr9:138393225..138393257, +
2.39e-66FFCP PHASE1:Hg19::chr1:188856517..188856523,-#_8c53dfa338c1f42c40ac518e5ae62d6ap1@ENST00000414765
2.39e-66FFCP PHASE1:Hg19::chr7:68735137..68735150,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr7:68735137..68735150, +
2.39e-66FFCP PHASE1:Hg19::chr14:88452908..88452916,-#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr14:88452908..88452916, -
2.39e-66FFCP PHASE1:Hg19::chr12:75174802..75174809,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr12:75174802..75174809, +
2.39e-66FFCP PHASE2:Hg19::chr6:145434485..145434492,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr6:145434485..145434492, +
2.39e-66FFCP PHASE2:Hg19::chr1:188874798..188874820,+#_8c53dfa338c1f42c40ac518e5ae62d6ap1@ENST00000445072
2.39e-66FFCP PHASE2:Hg19::chr7:68735026..68735050,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr7:68735026..68735050, +
2.39e-66FFCP PHASE2:Hg19::chr13:109644678..109644725,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr13:109644678..109644725, +
2.39e-66FFCP PHASE1:Hg19::chr1:234565260..234565271,-#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr1:234565260..234565271, -
2.39e-66FFCP PHASE1:Hg19::chr3:63805044..63805054,+#_8c53dfa338c1f42c40ac518e5ae62d6ap1@C3orf49
2.39e-66FFCP PHASE2:Hg19::chr1:33886864..33886872,-#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr1:33886864..33886872, -
2.39e-66FFCP PHASE1:Hg19::chr1:188861179..188861222,-#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr1:188861179..188861222, -
2.39e-66FFCP PHASE2:Hg19::chr6:166582133..166582149,-#_8c53dfa338c1f42c40ac518e5ae62d6ap1@T
2.39e-66FFCP PHASE2:Hg19::chr14:88452908..88452916,-#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr14:88452908..88452916, -
2.39e-66FFCP PHASE2:Hg19::chr18:61368086..61368120,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr18:61368086..61368120, +
2.39e-66FFCP PHASE1:Hg19::chr13:109644678..109644725,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr13:109644678..109644725, +
2.39e-66FFCP PHASE2:Hg19::chr6:166575975..166575983,-#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr6:166575975..166575983, -
2.39e-66FFCP PHASE2:Hg19::chr2:115929667..115929677,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr2:115929667..115929677, +
2.39e-66FFCP PHASE2:Hg19::chr12:40426483..40426524,-#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr12:40426483..40426524, -
2.39e-66FFCP PHASE1:Hg19::chr6:145434485..145434492,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr6:145434485..145434492, +
2.39e-66FFCP PHASE2:Hg19::chr1:188856590..188856595,-#_8c53dfa338c1f42c40ac518e5ae62d6ap4@ENST00000414765
2.39e-66FFCP PHASE1:Hg19::chr12:40426483..40426524,-#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr12:40426483..40426524, -
2.39e-66FFCP PHASE2:Hg19::chr3:189838995..189839000,-#_8c53dfa338c1f42c40ac518e5ae62d6ap31@LEPREL1
2.39e-66FFCP PHASE1:Hg19::chr7:68735026..68735050,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr7:68735026..68735050, +
2.39e-66FFCP PHASE1:Hg19::chr18:61368086..61368120,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr18:61368086..61368120, +
2.39e-66FFCP PHASE2:Hg19::chr6:33644021..33644058,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr6:33644021..33644058, +
2.39e-66FFCP PHASE1:Hg19::chr1:188856567..188856573,-#_8c53dfa338c1f42c40ac518e5ae62d6ap2@ENST00000414765
2.39e-66FFCP PHASE1:Hg19::chr7:68735214..68735224,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr7:68735214..68735224, +
2.39e-66FFCP PHASE1:Hg19::chr6:166582133..166582149,-#_8c53dfa338c1f42c40ac518e5ae62d6ap1@T
2.39e-66FFCP PHASE1:Hg19::chr14:88452922..88452929,-#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr14:88452922..88452929, -
2.39e-66FFCP PHASE2:Hg19::chr7:158225991..158225999,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr7:158225991..158225999, +
2.39e-66FFCP PHASE1:Hg19::chr6:166575975..166575983,-#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr6:166575975..166575983, -
2.39e-66FFCP PHASE1:Hg19::chr2:115929667..115929677,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr2:115929667..115929677, +
2.39e-66FFCP PHASE2:Hg19::chr7:68735078..68735090,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr7:68735078..68735090, +
2.39e-66FFCP PHASE2:Hg19::chr1:33886874..33886882,-#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr1:33886874..33886882, -
2.39e-66FFCP PHASE1:Hg19::chr1:188874798..188874820,+#_8c53dfa338c1f42c40ac518e5ae62d6ap1@ENST00000445072
2.39e-66FFCP PHASE2:Hg19::chr14:88452922..88452929,-#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr14:88452922..88452929, -
2.39e-66FFCP PHASE1:Hg19::chr6:33644021..33644058,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr6:33644021..33644058, +
2.39e-66FFCP PHASE1:Hg19::chr7:158225991..158225999,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr7:158225991..158225999, +
2.39e-66FFCP PHASE2:Hg19::chr3:63804973..63804980,+#_8c53dfa338c1f42c40ac518e5ae62d6ap3@C3orf49
2.39e-66FFCP PHASE2:Hg19::chr6:138060034..138060045,-#_8c53dfa338c1f42c40ac518e5ae62d6ap1@ENST00000411615, p1@ENST00000419220
2.39e-66FFCP PHASE1:Hg19::chr1:33886864..33886872,-#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr1:33886864..33886872, -
2.39e-66FFCP PHASE1:Hg19::chr7:68735078..68735090,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr7:68735078..68735090, +
2.39e-66FFCP PHASE1:Hg19::chr17:9716257..9716264,-#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr17:9716257..9716264, -
2.39e-66FFCP PHASE1:Hg19::chr1:188856590..188856595,-#_8c53dfa338c1f42c40ac518e5ae62d6ap4@ENST00000414765
2.39e-66FFCP PHASE2:Hg19::chr7:158237237..158237241,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr7:158237237..158237241, +
2.39e-66FFCP PHASE1:Hg19::chr16:3332452..3332454,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr16:3332452..3332454, +
2.39e-66FFCP PHASE1:Hg19::chr3:189838995..189839000,-#_8c53dfa338c1f42c40ac518e5ae62d6ap31@LEPREL1
2.39e-66FFCP PHASE2:Hg19::chr7:68735132..68735135,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr7:68735132..68735135, +
2.39e-66FFCP PHASE2:Hg19::chr17:9716257..9716264,-#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr17:9716257..9716264, -
2.39e-66FFCP PHASE1:Hg19::chr6:138060034..138060045,-#_8c53dfa338c1f42c40ac518e5ae62d6ap1@ENST00000411615, p1@ENST00000419220
2.39e-66FFCP PHASE1:Hg19::chr7:158237237..158237241,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr7:158237237..158237241, +
2.39e-66FFCP PHASE2:Hg19::chr18:67563022..67563032,-#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr18:67563022..67563032, -
2.39e-66FFCP PHASE2:Hg19::chr16:3332452..3332454,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr16:3332452..3332454, +
2.39e-66FFCP PHASE2:Hg19::chr3:26426173..26426176,+#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr3:26426173..26426176, +
2.39e-66FFCP PHASE1:Hg19::chr1:33886874..33886882,-#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr1:33886874..33886882, -
2.39e-66FFCP PHASE2:Hg19::chr2:75145327..75145329,+#_8c53dfa338c1f42c40ac518e5ae62d6ap9@ENST00000435984
2.39e-66FFCP PHASE2:Hg19::chr1:188857554..188857562,-#_8c53dfa338c1f42c40ac518e5ae62d6ap@chr1:188857554..188857562, -
1.22e-44FFCP PHASE1:Hg19::chr17:9739716..9739725,+#_a614f54f6e71c17c2a48c3504ad2097ap13@GLP2R
1.22e-44FFCP PHASE2:Hg19::chr17:9739716..9739725,+#_a614f54f6e71c17c2a48c3504ad2097ap13@GLP2R
4.27e-34FFCP PHASE2:Hg19::chr2:33588929..33588937,+#_901b047a57a580edcf8434073ac3d0dfp@chr2:33588929..33588937, +
4.27e-34FFCP PHASE2:Hg19::chr1:246469406..246469412,-#_901b047a57a580edcf8434073ac3d0dfp18@SMYD3
4.27e-34FFCP PHASE2:Hg19::chr10:4822941..4822949,-#_901b047a57a580edcf8434073ac3d0dfp@chr10:4822941..4822949, -
4.27e-34FFCP PHASE1:Hg19::chr6:138060103..138060111,-#_901b047a57a580edcf8434073ac3d0dfp3@ENST00000411615, p3@ENST00000419220

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