UBERON:0002336: Difference between revisions
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|has_quality= | |has_quality= | ||
|id=UBERON:0002336 | |id=UBERON:0002336 | ||
|is_a=UBERON:0002473;;UBERON:0005340 | |is_a=UBERON:0002473 ;;UBERON:0005340 | ||
|is_obsolete= | |is_obsolete= | ||
|located_in= | |located_in= | ||
|name=corpus callosum | |name=corpus callosum | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 17:29, 12 September 2014
| Name: | corpus callosum | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "The corpus callosum is a thick bundle of nerve fibers comprising a commissural plate connecting the two cerebral hemispheres. It consists of contralateral axon projections that provides communications between the right and left cerebral hemispheres[GO]." [Wikipedia:Corpus_callosum] | ||
| Xrefs: |
| ||
| Comments: | This class was created automatically from a combination of ontologies | ||
| Alt_id: | UBERON:FMA_86464-MA_0000188-MIAA_0000286 | ||
| Subset: | uberon_slim |
Gray733.png]
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Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0002473(intercerebral commissure),UBERON:0005340(dorsal telencephalic commissure) |
|---|
Children
| derives from: | FF:0010042 (human corpus callosum - adult sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10042-101F6 (corpus callosum, adult, pool1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002336 (corpus callosum), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE2:Hg19::chr5:60927228..60927236,-#_ed833f88e9a8d66008bf96ea9b129878 | p3@BC032909, p3@BC032910 |
| 5.42e-195 | FFCP PHASE2:Hg19::chr17:73689469..73689476,-#_ed833f88e9a8d66008bf96ea9b129878 | p@chr17:73689469..73689476, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr14:36462819..36462832,+#_ed833f88e9a8d66008bf96ea9b129878 | p@chr14:36462819..36462832, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr14:36462819..36462832,+#_ed833f88e9a8d66008bf96ea9b129878 | p@chr14:36462819..36462832, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr17:73689469..73689476,-#_ed833f88e9a8d66008bf96ea9b129878 | p@chr17:73689469..73689476, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr5:60927228..60927236,-#_ed833f88e9a8d66008bf96ea9b129878 | p3@BC032909, p3@BC032910 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr15:93827399..93827403,+#_ed833f88e9a8d66008bf96ea9b129878 | p@chr15:93827399..93827403, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr15:93827399..93827403,+#_ed833f88e9a8d66008bf96ea9b129878 | p@chr15:93827399..93827403, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr14:33926303..33926307,-#_bb8da58e7f7698d9d6bfb290141b97ac | p@chr14:33926303..33926307, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr14:33926303..33926307,-#_bb8da58e7f7698d9d6bfb290141b97ac | p@chr14:33926303..33926307, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr12:78359873..78359882,+#_bb8da58e7f7698d9d6bfb290141b97ac | p41@NAV3 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr12:78359873..78359882,+#_bb8da58e7f7698d9d6bfb290141b97ac | p41@NAV3 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr11:110248322..110248329,-#_bb8da58e7f7698d9d6bfb290141b97ac | p@chr11:110248322..110248329, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:232548018..232548022,-#_bb8da58e7f7698d9d6bfb290141b97ac | p@chr2:232548018..232548022, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr11:110248322..110248329,-#_bb8da58e7f7698d9d6bfb290141b97ac | p@chr11:110248322..110248329, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:232548018..232548022,-#_bb8da58e7f7698d9d6bfb290141b97ac | p@chr2:232548018..232548022, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr19:35788742..35788752,+#_5a6993aaaad0bc0de363e3792aff3f07 | p@chr19:35788742..35788752, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr3:15374659..15374696,-#_5a6993aaaad0bc0de363e3792aff3f07 | p10@SH3BP5 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr3:15374659..15374696,-#_5a6993aaaad0bc0de363e3792aff3f07 | p10@SH3BP5 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr19:35788742..35788752,+#_5a6993aaaad0bc0de363e3792aff3f07 | p@chr19:35788742..35788752, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr10:73479518..73479527,-#_3354886a7566fe1fac078e463b1bd3c7 | p5@C10orf105 |
| 1.23e-66 | FFCP PHASE2:Hg19::chr7:124391226..124391235,-#_3354886a7566fe1fac078e463b1bd3c7 | p@chr7:124391226..124391235, - |
| 1.23e-66 | FFCP PHASE1:Hg19::chr8:42037488..42037504,+#_3354886a7566fe1fac078e463b1bd3c7 | p@chr8:42037488..42037504, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr8:42037488..42037504,+#_3354886a7566fe1fac078e463b1bd3c7 | p@chr8:42037488..42037504, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr17:72823919..72823924,-#_3354886a7566fe1fac078e463b1bd3c7 | p@chr17:72823919..72823924, - |
| 1.23e-66 | FFCP PHASE1:Hg19::chr7:124391226..124391235,-#_3354886a7566fe1fac078e463b1bd3c7 | p@chr7:124391226..124391235, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr10:73479518..73479527,-#_3354886a7566fe1fac078e463b1bd3c7 | p5@C10orf105 |
| 1.23e-66 | FFCP PHASE1:Hg19::chr12:78359680..78359686,+#_3354886a7566fe1fac078e463b1bd3c7 | p32@NAV3 |
| 1.23e-66 | FFCP PHASE2:Hg19::chr12:78359680..78359686,+#_3354886a7566fe1fac078e463b1bd3c7 | p32@NAV3 |
| 1.23e-66 | FFCP PHASE1:Hg19::chr17:72823919..72823924,-#_3354886a7566fe1fac078e463b1bd3c7 | p@chr17:72823919..72823924, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr10:61043452..61043467,-#_a2352c18e2ad7069f58cc70d92ccd3b7 | p16@FAM13C |
| 2.39e-66 | FFCP PHASE1:Hg19::chr10:25012236..25012245,-#_a2352c18e2ad7069f58cc70d92ccd3b7 | p24@ARHGAP21 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr6:163681762..163681767,+#_a2352c18e2ad7069f58cc70d92ccd3b7 | p@chr6:163681762..163681767, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr10:61043452..61043467,-#_a2352c18e2ad7069f58cc70d92ccd3b7 | p16@FAM13C |
| 2.39e-66 | FFCP PHASE2:Hg19::chr10:25012236..25012245,-#_a2352c18e2ad7069f58cc70d92ccd3b7 | p24@ARHGAP21 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr6:163681762..163681767,+#_a2352c18e2ad7069f58cc70d92ccd3b7 | p@chr6:163681762..163681767, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr5:35089832..35089839,-#_4ee627d5077a3cbfdb30934599a186f7 | p26@PRLR |
| 4.66e-66 | FFCP PHASE1:Hg19::chr17:40120071..40120085,+#_4ee627d5077a3cbfdb30934599a186f7 | p15@CNP |
| 4.66e-66 | FFCP PHASE1:Hg19::chr7:129015806..129015815,+#_4ee627d5077a3cbfdb30934599a186f7 | p@chr7:129015806..129015815, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr8:101522298..101522305,-#_4ee627d5077a3cbfdb30934599a186f7 | p@chr8:101522298..101522305, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr4:174293011..174293022,-#_4ee627d5077a3cbfdb30934599a186f7 | p@chr4:174293011..174293022, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr7:129012882..129012891,-#_4ee627d5077a3cbfdb30934599a186f7 | p@chr7:129012882..129012891, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr5:35089799..35089804,-#_4ee627d5077a3cbfdb30934599a186f7 | p20@PRLR |
| 4.66e-66 | FFCP PHASE2:Hg19::chr4:645709..645712,+#_4ee627d5077a3cbfdb30934599a186f7 | p15@PDE6B |
| 4.66e-66 | FFCP PHASE1:Hg19::chr13:99135698..99135706,+#_4ee627d5077a3cbfdb30934599a186f7 | p@chr13:99135698..99135706, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr13:99135698..99135706,+#_4ee627d5077a3cbfdb30934599a186f7 | p@chr13:99135698..99135706, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr14:91199850..91199861,-#_4ee627d5077a3cbfdb30934599a186f7 | p@chr14:91199850..91199861, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr14:91199850..91199861,-#_4ee627d5077a3cbfdb30934599a186f7 | p@chr14:91199850..91199861, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr4:174293011..174293022,-#_4ee627d5077a3cbfdb30934599a186f7 | p@chr4:174293011..174293022, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr5:35089832..35089839,-#_4ee627d5077a3cbfdb30934599a186f7 | p26@PRLR |
| 4.66e-66 | FFCP PHASE2:Hg19::chr7:129015806..129015815,+#_4ee627d5077a3cbfdb30934599a186f7 | p@chr7:129015806..129015815, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr4:645709..645712,+#_4ee627d5077a3cbfdb30934599a186f7 | p15@PDE6B |
| 4.66e-66 | FFCP PHASE2:Hg19::chr7:129012882..129012891,-#_4ee627d5077a3cbfdb30934599a186f7 | p@chr7:129012882..129012891, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr8:101522298..101522305,-#_4ee627d5077a3cbfdb30934599a186f7 | p@chr8:101522298..101522305, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr5:35089799..35089804,-#_4ee627d5077a3cbfdb30934599a186f7 | p20@PRLR |
| 4.66e-66 | FFCP PHASE2:Hg19::chr17:40120071..40120085,+#_4ee627d5077a3cbfdb30934599a186f7 | p15@CNP |
| 1.46e-50 | FFCP PHASE1:Hg19::chr6:170571770..170571782,-#_6d25fe9baaebff668cd3511e84028ae1 | p2@LOC154449 |
| 1.46e-50 | FFCP PHASE2:Hg19::chr6:170571770..170571782,-#_6d25fe9baaebff668cd3511e84028ae1 | p2@LOC154449 |
| 2.42e-50 | FFCP PHASE2:Hg19::chrX:103031196..103031205,-#_8ac6790f0dc75420471121db97a8bc2f | p@chrX:103031196..103031205, - |
| 2.42e-50 | FFCP PHASE2:Hg19::chr10:7454514..7454525,-#_8ac6790f0dc75420471121db97a8bc2f | p@chr10:7454514..7454525, - |
| 2.42e-50 | FFCP PHASE2:Hg19::chr7:30202318..30202329,+#_8ac6790f0dc75420471121db97a8bc2f | p@chr7:30202318..30202329, + |
| 2.42e-50 | FFCP PHASE1:Hg19::chr12:106697974..106697990,-#_8ac6790f0dc75420471121db97a8bc2f | p31@CKAP4 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr12:106697974..106697990,-#_8ac6790f0dc75420471121db97a8bc2f | p31@CKAP4 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr10:7454514..7454525,-#_8ac6790f0dc75420471121db97a8bc2f | p@chr10:7454514..7454525, - |
| 2.42e-50 | FFCP PHASE2:Hg19::chr19:15751984..15751994,+#_8ac6790f0dc75420471121db97a8bc2f | p6@CYP4F3 |
| 2.42e-50 | FFCP PHASE1:Hg19::chrX:103031196..103031205,-#_8ac6790f0dc75420471121db97a8bc2f | p@chrX:103031196..103031205, - |
| 2.42e-50 | FFCP PHASE1:Hg19::chr19:15751984..15751994,+#_8ac6790f0dc75420471121db97a8bc2f | p6@CYP4F3 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr4:74005833..74005844,-#_8ac6790f0dc75420471121db97a8bc2f | p@chr4:74005833..74005844, - |
| 2.42e-50 | FFCP PHASE2:Hg19::chr11:133996343..133996351,+#_8ac6790f0dc75420471121db97a8bc2f | p8@JAM3 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr11:133996343..133996351,+#_8ac6790f0dc75420471121db97a8bc2f | p8@JAM3 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr7:30202318..30202329,+#_8ac6790f0dc75420471121db97a8bc2f | p@chr7:30202318..30202329, + |
| 2.42e-50 | FFCP PHASE1:Hg19::chr4:74005833..74005844,-#_8ac6790f0dc75420471121db97a8bc2f | p@chr4:74005833..74005844, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr17:36726052..36726061,-#_562f407e37bd91071ca993577eaf8651 | p@chr17:36726052..36726061, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr17:36726052..36726061,-#_562f407e37bd91071ca993577eaf8651 | p@chr17:36726052..36726061, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr11:45922629..45922637,+#_562f407e37bd91071ca993577eaf8651 | p@chr11:45922629..45922637, + |
| 3.99e-50 | FFCP PHASE2:Hg19::chr9:20927844..20927855,+#_562f407e37bd91071ca993577eaf8651 | p@chr9:20927844..20927855, + |
| 3.99e-50 | FFCP PHASE1:Hg19::chr11:45922629..45922637,+#_562f407e37bd91071ca993577eaf8651 | p@chr11:45922629..45922637, + |
| 3.99e-50 | FFCP PHASE2:Hg19::chr3:160203278..160203289,-#_562f407e37bd91071ca993577eaf8651 | p8@TRIM59 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr3:160203278..160203289,-#_562f407e37bd91071ca993577eaf8651 | p8@TRIM59 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr6:164364681..164364684,-#_562f407e37bd91071ca993577eaf8651 | p@chr6:164364681..164364684, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr9:20927844..20927855,+#_562f407e37bd91071ca993577eaf8651 | p@chr9:20927844..20927855, + |
| 3.99e-50 | FFCP PHASE2:Hg19::chr6:164364681..164364684,-#_562f407e37bd91071ca993577eaf8651 | p@chr6:164364681..164364684, - |
| 6.58e-50 | FFCP PHASE2:Hg19::chr3:190578500..190578506,-#_e0e5fee29c1e978228c28a9778dae381 | p@chr3:190578500..190578506, - |
| 6.58e-50 | FFCP PHASE2:Hg19::chr11:67190503..67190512,+#_e0e5fee29c1e978228c28a9778dae381 | p8@CARNS1 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr9:112191163..112191174,-#_e0e5fee29c1e978228c28a9778dae381 | p10@PTPN3 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr4:7412700..7412704,+#_e0e5fee29c1e978228c28a9778dae381 | p@chr4:7412700..7412704, + |
| 6.58e-50 | FFCP PHASE2:Hg19::chr3:10706167..10706179,-#_e0e5fee29c1e978228c28a9778dae381 | p@chr3:10706167..10706179, - |
| 6.58e-50 | FFCP PHASE1:Hg19::chr3:190578500..190578506,-#_e0e5fee29c1e978228c28a9778dae381 | p@chr3:190578500..190578506, - |
| 6.58e-50 | FFCP PHASE1:Hg19::chr3:10706167..10706179,-#_e0e5fee29c1e978228c28a9778dae381 | p@chr3:10706167..10706179, - |
| 6.58e-50 | FFCP PHASE2:Hg19::chr6:133119649..133119655,-#_e0e5fee29c1e978228c28a9778dae381 | p6@C6orf192 |
| 6.58e-50 | FFCP PHASE1:Hg19::chrX:28605300..28605301,+#_e0e5fee29c1e978228c28a9778dae381 | p8@IL1RAPL1 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr2:219610931..219610941,+#_e0e5fee29c1e978228c28a9778dae381 | p13@TTLL4 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr11:117585539..117585541,-#_e0e5fee29c1e978228c28a9778dae381 | p@chr11:117585539..117585541, - |
| 6.58e-50 | FFCP PHASE1:Hg19::chr11:67190503..67190512,+#_e0e5fee29c1e978228c28a9778dae381 | p8@CARNS1 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr9:112191163..112191174,-#_e0e5fee29c1e978228c28a9778dae381 | p10@PTPN3 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr2:219610931..219610941,+#_e0e5fee29c1e978228c28a9778dae381 | p13@TTLL4 |
| 6.58e-50 | FFCP PHASE2:Hg19::chrX:28605300..28605301,+#_e0e5fee29c1e978228c28a9778dae381 | p8@IL1RAPL1 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr12:99288459..99288464,-#_e0e5fee29c1e978228c28a9778dae381 | p38@ANKS1B |
| 6.58e-50 | FFCP PHASE1:Hg19::chr12:99288459..99288464,-#_e0e5fee29c1e978228c28a9778dae381 | p38@ANKS1B |
| 6.58e-50 | FFCP PHASE2:Hg19::chr4:7412700..7412704,+#_e0e5fee29c1e978228c28a9778dae381 | p@chr4:7412700..7412704, + |
