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{{UBERON
{{UBERON
|id=UBERON:0002417
|alt_id=UBERON:MA_0000021-FMA_259211
|name=abdominal segment of trunk
|anatomical_img_id=FMA:259211
|namespace=
|def="the abdominal segment of the torso." [Wikipedia:Lumbar]
|xref=FMA:259211;;MA:0000021
|is_a=UBERON:0009569
|synonym="abdomen/pelvis/perineum" RELATED [MA:0000021];;"lower body" RELATED [MA:0000021];;"lumbar region" RELATED [UBERON:cjm]
|comment=
|comment=
|alt_id=UBERON:MA_0000021-FMA_259211
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="the abdominal segment of the torso." [Wikipedia:Lumbar]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0002417
|is_a=UBERON:0009569 ;;UBERON:0011676
|is_obsolete=
|located_in=
|located_in=
|name=abdominal segment of trunk
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="abdomen/pelvis/perineum" RELATED [MA:0000021];;"lower body" RELATED [MA:0000021];;"lumbar region" RELATED [UBERON:cjm]
|union_of=
|xref=FMA:259211;;MA:0000021
}}
}}

Latest revision as of 17:31, 12 September 2014

Name:abdominal segment of trunk
Namespace:FANTOM
Definition:"the abdominal segment of the torso." [Wikipedia:Lumbar]
Xrefs:
links:

FMA:259211

MA:0000021
Synonyms: "abdomen/pelvis/perineum" RELATED [MA:0000021]
"lower body" RELATED [MA:0000021]
"lumbar region" RELATED [UBERON:cjm]
Alt_id: UBERON:MA_0000021-FMA_259211

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0009569(subdivision of trunk),UBERON:0011676(subdivision of organism along main body axis)



Children

part of:UBERON:0000916 (abdomen),UBERON:0002355 (pelvis),UBERON:0003835 (abdominal segment blood vessel),UBERON:0003838 (abdominal segment connective tissue),UBERON:0005173 (abdominal segment element)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002417 (abdominal segment of trunk), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.88e-45FFCP PHASE2:Hg19::chr10:99344428..99344441,+#_b1dfee6084955cee52c9481050fb58d6p5@PI4K2A
3.88e-45FFCP PHASE1:Hg19::chr10:99344428..99344441,+#_b1dfee6084955cee52c9481050fb58d6p5@PI4K2A
7.55e-41FFCP PHASE1:Hg19::chr16:57831685..57831697,-#_057d17d68cc1fb33dcfc7b6e01c31695p7@KIFC3
7.55e-41FFCP PHASE2:Hg19::chr16:57831685..57831697,-#_057d17d68cc1fb33dcfc7b6e01c31695p7@KIFC3
7.31e-40FFCP PHASE1:Mm9::chr4:95246108..95246119,+#_9505abd5679d62af1afa1a12489d983fp4@Fggy
7.31e-40FFCP PHASE2:Mm9::chr4:95246108..95246119,+#_9505abd5679d62af1afa1a12489d983fp4@Fggy
3.21e-39FFCP PHASE2:Mm9::chr12:58298278..58298292,-#_268531d2ec58e7dfb059298f1a8d27ffp4@Slc25a21
3.21e-39FFCP PHASE1:Mm9::chr12:58298278..58298292,-#_268531d2ec58e7dfb059298f1a8d27ffp4@Slc25a21
1.15e-38FFCP PHASE1:Mm9::chr12:58298298..58298317,-#_25d165dd7a66ce7927203d2effec9d15p3@Slc25a21
1.15e-38FFCP PHASE2:Mm9::chr12:58298298..58298317,-#_25d165dd7a66ce7927203d2effec9d15p3@Slc25a21
2.74e-38FFCP PHASE1:Hg19::chr1:55331310..55331365,-#_d9d49020e097567e7f7f762915aeac56p3@DHCR24
2.74e-38FFCP PHASE2:Hg19::chr1:55331310..55331365,-#_d9d49020e097567e7f7f762915aeac56p3@DHCR24
4.6e-38FFCP PHASE1:Mm9::chr12:58298249..58298262,-#_a801662c394a3542d5b48daf5bf62b65p5@Slc25a21
4.6e-38FFCP PHASE2:Mm9::chr12:58298249..58298262,-#_a801662c394a3542d5b48daf5bf62b65p5@Slc25a21
4.65e-37FFCP PHASE1:Mm9::chr4:129255765..129255776,-#_6a073e738cf79d230a77c358b7855532p2@Fam167b
4.65e-37FFCP PHASE2:Mm9::chr4:129255765..129255776,-#_6a073e738cf79d230a77c358b7855532p2@Fam167b
6.07e-37FFCP PHASE2:Hg19::chr8:21911054..21911086,+#_41c220edb64cce2f7b0fc2be2bd8877fp9@EPB49
6.07e-37FFCP PHASE1:Hg19::chr8:21911054..21911086,+#_41c220edb64cce2f7b0fc2be2bd8877fp9@EPB49
1.34e-36FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_3526e2088acd7aa83fe3074ad3ae3675p4@PAX2
1.34e-36FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_3526e2088acd7aa83fe3074ad3ae3675p4@PAX2
3.37e-36FFCP PHASE2:Hg19::chr11:117695449..117695466,-#_12ffeebbfe80497e922c6f8f3e5f125ap1@FXYD2
3.37e-36FFCP PHASE1:Hg19::chr11:117695449..117695466,-#_12ffeebbfe80497e922c6f8f3e5f125ap1@FXYD2
8.22e-36FFCP PHASE1:Mm9::chr6:34129226..34129246,+#_d2c6d5dcbe73e49497b064ca9f6ff09cp2@ENSMUST00000145644
8.22e-36FFCP PHASE2:Mm9::chr6:34129226..34129246,+#_d2c6d5dcbe73e49497b064ca9f6ff09cp2@ENSMUST00000145644
1.41e-35FFCP PHASE2:Mm9::chr10:58904532..58904548,-#_71510d4557515e859a0d98fc28c29248p3@Oit3
1.41e-35FFCP PHASE1:Mm9::chr10:58904532..58904548,-#_71510d4557515e859a0d98fc28c29248p3@Oit3
1.53e-35FFCP PHASE1:Mm9::chr8:73247943..73247958,+#_00f8374637d15b3017b00ca3f672854ep3@Pde4c
1.53e-35FFCP PHASE2:Mm9::chr8:73247943..73247958,+#_00f8374637d15b3017b00ca3f672854ep3@Pde4c
3.31e-35FFCP PHASE1:Mm9::chr9:44611035..44611044,-#_4ea1b0aeaa09a2acd9dde6c7a729f471p4@Ttc36
3.31e-35FFCP PHASE2:Mm9::chr9:44611035..44611044,-#_4ea1b0aeaa09a2acd9dde6c7a729f471p4@Ttc36
1.64e-34FFCP PHASE2:Mm9::chr19:12707997..12708015,+#_e5f8d0d1aa218d49e6f5f13c5456f6f7p1@Glyat
1.64e-34FFCP PHASE1:Mm9::chr19:12707997..12708015,+#_e5f8d0d1aa218d49e6f5f13c5456f6f7p1@Glyat
2.61e-34FFCP PHASE2:Mm9::chr11:60622345..60622377,-#_8ea6cd8440978fc39b8c694f6679d811p@chr11:60622345..60622377, -
2.61e-34FFCP PHASE1:Mm9::chr11:60622345..60622377,-#_8ea6cd8440978fc39b8c694f6679d811p@chr11:60622345..60622377, -
8.0e-34FFCP PHASE1:Mm9::chr11:7097807..7097814,+#_d27c0f5bbc58c845b24522a9010487f5p2@Igfbp1
8.0e-34FFCP PHASE2:Mm9::chr11:7097807..7097814,+#_d27c0f5bbc58c845b24522a9010487f5p2@Igfbp1
1.27e-33FFCP PHASE2:Mm9::chr13:23931270..23931311,+#_8fb2472de12b0647b11b004b1f2b72bcp2@Slc17a3
1.27e-33FFCP PHASE1:Mm9::chr13:23931270..23931311,+#_8fb2472de12b0647b11b004b1f2b72bcp2@Slc17a3
1.4e-33FFCP PHASE2:Mm9::chr4:95246137..95246153,+#_4557161cc1ccbf4f31ae1f084ac8a8b1p3@Fggy
1.4e-33FFCP PHASE1:Mm9::chr4:95246137..95246153,+#_4557161cc1ccbf4f31ae1f084ac8a8b1p3@Fggy
1.76e-33FFCP PHASE1:Mm9::chr16:37621995..37622022,-#_1c277a4a8e4f1de691f9d92d175b2de6p@chr16:37621995..37622022, -
1.76e-33FFCP PHASE2:Mm9::chr16:37621995..37622022,-#_1c277a4a8e4f1de691f9d92d175b2de6p@chr16:37621995..37622022, -
2.2e-33FFCP PHASE1:Mm9::chr4:96330769..96330789,-#_ec3e093c464e5091c7b2ed58683df3c6p2@Cyp2j5
2.2e-33FFCP PHASE2:Mm9::chr4:96330769..96330789,-#_ec3e093c464e5091c7b2ed58683df3c6p2@Cyp2j5
2.92e-33FFCP PHASE2:Mm9::chr13:23931467..23931489,+#_0129f58104f2d6101d800510f79ffd2ap3@Slc17a3
2.92e-33FFCP PHASE1:Mm9::chr13:23931467..23931489,+#_0129f58104f2d6101d800510f79ffd2ap3@Slc17a3
5.26e-33FFCP PHASE1:Mm9::chr16:37580223..37580237,+#_9a1364ad61e00e0f00fe45b21f119646p4@Hgd
5.26e-33FFCP PHASE2:Mm9::chr16:37580223..37580237,+#_9a1364ad61e00e0f00fe45b21f119646p4@Hgd
8.68e-33FFCP PHASE1:Mm9::chr1:141398256..141398267,+#_a1f7326e60f3ac90ad89b5e95eb4b362p3@F13b
8.68e-33FFCP PHASE2:Mm9::chr1:141398256..141398267,+#_a1f7326e60f3ac90ad89b5e95eb4b362p3@F13b
1.21e-32FFCP PHASE1:Mm9::chr15:82624876..82624892,-#_9a30291be92dfe24b1861936670af328p5@Cyp2d26
1.21e-32FFCP PHASE2:Mm9::chr15:82624876..82624892,-#_9a30291be92dfe24b1861936670af328p5@Cyp2d26
1.25e-32FFCP PHASE1:Mm9::chr10:95305558..95305580,-#_0c50f02727a5104283f46da8147d183cp@chr10:95305558..95305580, -
1.25e-32FFCP PHASE2:Mm9::chr10:95305558..95305580,-#_0c50f02727a5104283f46da8147d183cp@chr10:95305558..95305580, -
1.31e-32FFCP PHASE1:Hg19::chr20:42187656..42187673,+#_8efefd87f7e015ecccb3222616f3b2b9p2@SGK2
1.31e-32FFCP PHASE2:Hg19::chr20:42187656..42187673,+#_8efefd87f7e015ecccb3222616f3b2b9p2@SGK2
1.68e-32FFCP PHASE2:Mm9::chr9:44609886..44609901,-#_a9d8e20e5e5718619bd2081dbeea8826p@chr9:44609886..44609901, -
1.68e-32FFCP PHASE1:Mm9::chr9:44609886..44609901,-#_a9d8e20e5e5718619bd2081dbeea8826p@chr9:44609886..44609901, -
1.75e-32FFCP PHASE1:Mm9::chr16:37580298..37580310,+#_f94e0647f457b0418f26c6cb4a1d5292p3@Hgd
1.75e-32FFCP PHASE2:Mm9::chr16:37580298..37580310,+#_f94e0647f457b0418f26c6cb4a1d5292p3@Hgd
2.68e-32FFCP PHASE2:Mm9::chr15:9265320..9265378,+#_0355482ba041e7508e2ced6141bb5273p1@Ugt3a2
2.68e-32FFCP PHASE1:Mm9::chr15:9265320..9265378,+#_0355482ba041e7508e2ced6141bb5273p1@Ugt3a2
3.54e-32FFCP PHASE1:Mm9::chr4:150283537..150283568,-#_28db1000e1b3ea0019649c5b7e44813cp5@Park7
3.54e-32FFCP PHASE2:Mm9::chr4:150283537..150283568,-#_28db1000e1b3ea0019649c5b7e44813cp5@Park7
3.97e-32FFCP PHASE2:Mm9::chr9:44609861..44609874,-#_1d0da69a3da86706eb137c8884f05662p@chr9:44609861..44609874, -
3.97e-32FFCP PHASE1:Mm9::chr9:44609861..44609874,-#_1d0da69a3da86706eb137c8884f05662p@chr9:44609861..44609874, -
4.0e-32FFCP PHASE1:Hg19::chr7:44580918..44580934,-#_7a9c022b55bc49ec4939d7255be8cbd0p2@NPC1L1
4.0e-32FFCP PHASE2:Hg19::chr7:44580918..44580934,-#_7a9c022b55bc49ec4939d7255be8cbd0p2@NPC1L1
5.65e-32FFCP PHASE1:Mm9::chr7:30124235..30124271,-#_868d82f4f745692dbe9ac1b9a798ad64p@chr7:30124235..30124271, -
5.65e-32FFCP PHASE2:Mm9::chr7:30124235..30124271,-#_868d82f4f745692dbe9ac1b9a798ad64p@chr7:30124235..30124271, -
5.84e-32FFCP PHASE2:Mm9::chr15:99733367..99733388,+#_ef7df0e7c9dbc24a6f0674526e152d65p@chr15:99733367..99733388, +
5.84e-32FFCP PHASE1:Mm9::chr15:99733367..99733388,+#_ef7df0e7c9dbc24a6f0674526e152d65p@chr15:99733367..99733388, +
6.15e-32FFCP PHASE1:Mm9::chr13:58224772..58224789,-#_502fa959ddbfb853e8c778966cece765p@chr13:58224772..58224789, -
6.15e-32FFCP PHASE2:Mm9::chr13:58224772..58224789,-#_502fa959ddbfb853e8c778966cece765p@chr13:58224772..58224789, -
6.95e-32FFCP PHASE2:Hg19::chr7:44580861..44580912,-#_0eb9df76746cb82807e54285f45bc556p1@NPC1L1
6.95e-32FFCP PHASE1:Hg19::chr7:44580861..44580912,-#_0eb9df76746cb82807e54285f45bc556p1@NPC1L1
7.08e-32FFCP PHASE2:Mm9::chr4:140176541..140176565,-#_7933ce7d4139c12bd9a1cb536fd9e704p@chr4:140176541..140176565, -
7.08e-32FFCP PHASE1:Mm9::chr4:140176541..140176565,-#_7933ce7d4139c12bd9a1cb536fd9e704p@chr4:140176541..140176565, -
7.56e-32FFCP PHASE1:Mm9::chr6:3938967..3938987,-#_c8fbbaf1a8f6d7baccc635f7cb9771a7p@chr6:3938967..3938987, -
7.56e-32FFCP PHASE2:Mm9::chr6:3938967..3938987,-#_c8fbbaf1a8f6d7baccc635f7cb9771a7p@chr6:3938967..3938987, -
1.06e-31FFCP PHASE1:Mm9::chr16:23029135..23029149,-#_7e549c589b49a43f1ca3ef5e1fdc6acep4@Kng2
1.06e-31FFCP PHASE2:Mm9::chr16:23029135..23029149,-#_7e549c589b49a43f1ca3ef5e1fdc6acep4@Kng2
1.19e-31FFCP PHASE1:Mm9::chrX:72625134..72625162,-#_7cc307ca4d4c5d6e99d560694fab42f9p1@F8
1.19e-31FFCP PHASE2:Mm9::chrX:72625134..72625162,-#_7cc307ca4d4c5d6e99d560694fab42f9p1@F8
1.91e-31FFCP PHASE1:Mm9::chr11:102268097..102268142,-#_1a61524ac4872fed6c88e2020813d071p4@Slc25a39
1.91e-31FFCP PHASE2:Mm9::chr11:102268097..102268142,-#_1a61524ac4872fed6c88e2020813d071p4@Slc25a39
2.3e-31FFCP PHASE1:Mm9::chr1:177562272..177562282,+#_72bed45820cfc62a8b3eefafd1077b1cp4@Kmo
2.3e-31FFCP PHASE2:Mm9::chr1:177562272..177562282,+#_72bed45820cfc62a8b3eefafd1077b1cp4@Kmo
2.9e-31FFCP PHASE2:Hg19::chr4:155484103..155484147,+#_8dab8d742288c7f0be06fcdfe27f21dap2@FGB
2.9e-31FFCP PHASE1:Hg19::chr4:155484103..155484147,+#_8dab8d742288c7f0be06fcdfe27f21dap2@FGB
3.29e-31FFCP PHASE2:Mm9::chr2:27103824..27103840,-#_a4ee345d9bb9d018b25e8e0f7d63e9a5p6@Sardh
3.29e-31FFCP PHASE1:Mm9::chr2:27103824..27103840,-#_a4ee345d9bb9d018b25e8e0f7d63e9a5p6@Sardh
4.81e-31FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_f66fa1c9a1bad2a0e74be40bc75e5a42p7@HOXA10
4.81e-31FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_f66fa1c9a1bad2a0e74be40bc75e5a42p7@HOXA10
8.15e-31FFCP PHASE1:Mm9::chr8:25686769..25686840,-#_733b6e438b6fbee041e408dd76665c3ep1@Ido2
8.15e-31FFCP PHASE2:Mm9::chr8:25686769..25686840,-#_733b6e438b6fbee041e408dd76665c3ep1@Ido2
9.04e-31FFCP PHASE2:Mm9::chr13:94444278..94444281,-#_914c0ee12d6d361252ca9386cf710c56p3@Bhmt2
9.04e-31FFCP PHASE1:Mm9::chr13:94444278..94444281,-#_914c0ee12d6d361252ca9386cf710c56p3@Bhmt2
9.75e-31FFCP PHASE1:Mm9::chr5:90897694..90897705,+#_ed1872f81cc7f488b4b71e1a7b482f25p@chr5:90897694..90897705, +
9.75e-31FFCP PHASE2:Mm9::chr5:90897694..90897705,+#_ed1872f81cc7f488b4b71e1a7b482f25p@chr5:90897694..90897705, +

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