UBERON:0003513: Difference between revisions
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|located_in= | |located_in= | ||
|name=trunk blood vessel | |name=trunk blood vessel | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0002100 | |part_of=UBERON:0002100 | ||
Latest revision as of 17:40, 12 September 2014
| Name: | trunk blood vessel | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A blood vessel that is part of a trunk [Obol]." [OBOL:automatic] | ||
| Xrefs: |
| ||
| Synonyms: |
"blood vessel of torso" EXACT [OBOL:automatic] "blood vessel of trunk" EXACT [OBOL:automatic] "torso blood vessel" EXACT [OBOL:automatic] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0001981(blood vessel) |
|---|---|
| part_of: | UBERON:0002100(trunk) |
Children
| is a: | UBERON:0003834 (thoracic segment blood vessel),UBERON:0003835 (abdominal segment blood vessel),UBERON:0005622 (right dorsal aorta),UBERON:0005805 (dorsal aorta) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11287-116I9 (Smooth Muscle Cells - Internal Thoracic Artery, donor1)
- 11289-117A2 (Smooth Muscle Cells - Subclavian Artery, donor1)
- 11364-117I5 (Smooth Muscle Cells - Internal Thoracic Artery, donor2)
- 11366-117I7 (Smooth Muscle Cells - Subclavian Artery, donor2)
- 11436-118H5 (Smooth Muscle Cells - Internal Thoracic Artery, donor3)
- 11438-118H7 (Smooth Muscle Cells - Subclavian Artery, donor3)
- 11521-119H9 (Hepatic Sinusoidal Endothelial Cells, donor1)
- 11601-120H8 (Hepatic Sinusoidal Endothelial Cells, donor2)
- 11682-122H8 (Hepatic Sinusoidal Endothelial Cells, donor3)
- 11830-124G3 (Mouse hepatic Sinusoidal Endothelial Cells, donor1)
... further results Mouse (Mus musculus)
- 11287-116I9 (Smooth Muscle Cells - Internal Thoracic Artery, donor1)
- 11289-117A2 (Smooth Muscle Cells - Subclavian Artery, donor1)
- 11364-117I5 (Smooth Muscle Cells - Internal Thoracic Artery, donor2)
- 11366-117I7 (Smooth Muscle Cells - Subclavian Artery, donor2)
- 11436-118H5 (Smooth Muscle Cells - Internal Thoracic Artery, donor3)
- 11438-118H7 (Smooth Muscle Cells - Subclavian Artery, donor3)
- 11521-119H9 (Hepatic Sinusoidal Endothelial Cells, donor1)
- 11601-120H8 (Hepatic Sinusoidal Endothelial Cells, donor2)
- 11682-122H8 (Hepatic Sinusoidal Endothelial Cells, donor3)
- 11830-124G3 (Mouse hepatic Sinusoidal Endothelial Cells, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003513 (trunk blood vessel), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.07e-86 | FFCP PHASE2:Mm9::chr8:127816016..127816021,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr8:127816016..127816021, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:42915185..42915192,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr9:42915185..42915192, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:93942324..93942342,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr10:93942324..93942342, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:113542610..113542614,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr13:113542610..113542614, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:137570295..137570315,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr1:137570295..137570315, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:32178407..32178408,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr15:32178407..32178408, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:86691503..86691504,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr12:86691503..86691504, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr14:15179132..15179141,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p8@Il3ra |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:35093377..35093381,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr17:35093377..35093381, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr13:113550715..113550722,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr13:113550715..113550722, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr5:53111093..53111095,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr5:53111093..53111095, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:62009160..62009164,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr4:62009160..62009164, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:87046930..87046933,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr12:87046930..87046933, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:51831254..51831256,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr6:51831254..51831256, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:24807620..24807650,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr17:24807620..24807650, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:119254092..119254100,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr11:119254092..119254100, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:44793802..44793835,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr18:44793802..44793835, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:82193340..82193343,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr15:82193340..82193343, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:87745380..87745385,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr8:87745380..87745385, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr13:100000226..100000230,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr13:100000226..100000230, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:138241693..138241697,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr1:138241693..138241697, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr3:90270007..90270012,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr3:90270007..90270012, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:62009160..62009164,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr4:62009160..62009164, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:11935531..11935538,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr2:11935531..11935538, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:3311867..3311873,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr8:3311867..3311873, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:96429295..96429302,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr13:96429295..96429302, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:85587155..85587188,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr10:85587155..85587188, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:86713876..86713879,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr8:86713876..86713879, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:74684893..74684910,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr12:74684893..74684910, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chrX:166418658..166418683,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chrX:166418658..166418683, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:169549462..169549477,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr2:169549462..169549477, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr13:96429602..96429605,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr13:96429602..96429605, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:88237840..88237851,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr12:88237840..88237851, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr8:25530071..25530072,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr8:25530071..25530072, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:109223756..109223764,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr11:109223756..109223764, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:141645056..141645068,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr4:141645056..141645068, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:86691530..86691535,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr12:86691530..86691535, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:35096519..35096524,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr17:35096519..35096524, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr14:15179132..15179141,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p8@Il3ra |
| 3.07e-86 | FFCP PHASE1:Mm9::chr7:52781901..52781904,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr7:52781901..52781904, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:114123814..114123821,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr8:114123814..114123821, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr5:32912678..32912687,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr5:32912678..32912687, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:12388232..12388237,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr17:12388232..12388237, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:85585949..85585969,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr10:85585949..85585969, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:39297570..39297573,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr18:39297570..39297573, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:100752983..100752984,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr12:100752983..100752984, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr2:11935531..11935538,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr2:11935531..11935538, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:117419958..117419964,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr10:117419958..117419964, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr3:121593688..121593695,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr3:121593688..121593695, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:39513150..39513152,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr18:39513150..39513152, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:48398664..48398684,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr6:48398664..48398684, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:48822294..48822295,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr17:48822294..48822295, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:64344878..64344887,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr5:64344878..64344887, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:82193340..82193343,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr15:82193340..82193343, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:186559285..186559288,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr1:186559285..186559288, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:85585949..85585969,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr10:85585949..85585969, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:43407825..43407830,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr4:43407825..43407830, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:42915220..42915225,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr9:42915220..42915225, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr3:9705000..9705004,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p4@Pag1 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr8:3311867..3311873,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr8:3311867..3311873, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:66883923..66883955,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr1:66883923..66883955, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:113543694..113543702,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr13:113543694..113543702, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr8:87745380..87745385,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr8:87745380..87745385, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:86691530..86691535,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr12:86691530..86691535, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:35881716..35881727,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr18:35881716..35881727, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr14:101778294..101778296,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr14:101778294..101778296, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr7:118133901..118133904,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr7:118133901..118133904, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:35093616..35093631,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr17:35093616..35093631, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:117419958..117419964,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr10:117419958..117419964, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:15678147..15678149,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr6:15678147..15678149, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:107196799..107196814,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr11:107196799..107196814, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:60279719..60279737,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr10:60279719..60279737, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr3:9705000..9705004,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p4@Pag1 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:35881716..35881727,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr18:35881716..35881727, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr7:118133901..118133904,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr7:118133901..118133904, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:42915101..42915106,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr9:42915101..42915106, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:84756280..84756286,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr2:84756280..84756286, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr7:109031260..109031268,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr7:109031260..109031268, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:82207617..82207621,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr15:82207617..82207621, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr16:28911901..28911906,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr16:28911901..28911906, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:100890388..100890423,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr4:100890388..100890423, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:35096519..35096524,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr17:35096519..35096524, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:88669906..88669914,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr15:88669906..88669914, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:59435855..59435878,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr15:59435855..59435878, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:45920408..45920437,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr9:45920408..45920437, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr7:117101788..117101793,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr7:117101788..117101793, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:75375903..75375931,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr5:75375903..75375931, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr1:66883923..66883955,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr1:66883923..66883955, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:96429602..96429605,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr13:96429602..96429605, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:21389022..21389032,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr10:21389022..21389032, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:129180613..129180616,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr6:129180613..129180616, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:34549876..34549892,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr6:34549876..34549892, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr7:109031260..109031268,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr7:109031260..109031268, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr3:104857794..104857802,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr3:104857794..104857802, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:21389022..21389032,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr10:21389022..21389032, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:68437375..68437378,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr11:68437375..68437378, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr16:85547242..85547252,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr16:85547242..85547252, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:59435855..59435878,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr15:59435855..59435878, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:25530071..25530072,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr8:25530071..25530072, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:91441074..91441080,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr6:91441074..91441080, - |
