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{{UBERON
{{UBERON
|id=UBERON:0003513
|alt_id=
|name=trunk blood vessel
|namespace=
|def="A blood vessel that is part of a trunk [Obol]." [OBOL:automatic]
|xref=MA:0000511
|is_a=UBERON:0001981
|synonym="blood vessel of torso" EXACT [OBOL:automatic];;"blood vessel of trunk" EXACT [OBOL:automatic];;"torso blood vessel" EXACT [OBOL:automatic]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A blood vessel that is part of a trunk [Obol]." [OBOL:automatic]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0003513
|is_a=UBERON:0001981
|is_obsolete=
|located_in=
|located_in=
|name=trunk blood vessel
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0002100
|part_of=UBERON:0002100
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|subset=
|synonym="blood vessel of torso" EXACT [OBOL:automatic];;"blood vessel of trunk" EXACT [OBOL:automatic];;"torso blood vessel" EXACT [OBOL:automatic]
|union_of=
|xref=MA:0000511
}}
}}

Latest revision as of 17:40, 12 September 2014

Name:trunk blood vessel
Namespace:FANTOM
Definition:"A blood vessel that is part of a trunk [Obol]." [OBOL:automatic]
Xrefs:
links:
MA:0000511
Synonyms: "blood vessel of torso" EXACT [OBOL:automatic]
"blood vessel of trunk" EXACT [OBOL:automatic]
"torso blood vessel" EXACT [OBOL:automatic]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0001981(blood vessel)
part_of:UBERON:0002100(trunk)



Children

is a:UBERON:0003834 (thoracic segment blood vessel),UBERON:0003835 (abdominal segment blood vessel),UBERON:0005622 (right dorsal aorta),UBERON:0005805 (dorsal aorta)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

  • 11287-116I9 (Smooth Muscle Cells - Internal Thoracic Artery, donor1)
  • 11289-117A2 (Smooth Muscle Cells - Subclavian Artery, donor1)
  • 11364-117I5 (Smooth Muscle Cells - Internal Thoracic Artery, donor2)
  • 11366-117I7 (Smooth Muscle Cells - Subclavian Artery, donor2)
  • 11436-118H5 (Smooth Muscle Cells - Internal Thoracic Artery, donor3)
  • 11438-118H7 (Smooth Muscle Cells - Subclavian Artery, donor3)
  • 11521-119H9 (Hepatic Sinusoidal Endothelial Cells, donor1)
  • 11601-120H8 (Hepatic Sinusoidal Endothelial Cells, donor2)
  • 11682-122H8 (Hepatic Sinusoidal Endothelial Cells, donor3)
  • 11830-124G3 (Mouse hepatic Sinusoidal Endothelial Cells, donor1)

... further results Mouse (Mus musculus)

  • 11287-116I9 (Smooth Muscle Cells - Internal Thoracic Artery, donor1)
  • 11289-117A2 (Smooth Muscle Cells - Subclavian Artery, donor1)
  • 11364-117I5 (Smooth Muscle Cells - Internal Thoracic Artery, donor2)
  • 11366-117I7 (Smooth Muscle Cells - Subclavian Artery, donor2)
  • 11436-118H5 (Smooth Muscle Cells - Internal Thoracic Artery, donor3)
  • 11438-118H7 (Smooth Muscle Cells - Subclavian Artery, donor3)
  • 11521-119H9 (Hepatic Sinusoidal Endothelial Cells, donor1)
  • 11601-120H8 (Hepatic Sinusoidal Endothelial Cells, donor2)
  • 11682-122H8 (Hepatic Sinusoidal Endothelial Cells, donor3)
  • 11830-124G3 (Mouse hepatic Sinusoidal Endothelial Cells, donor1)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003513 (trunk blood vessel), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.07e-86FFCP PHASE1:Mm9::chr10:85587155..85587188,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr10:85587155..85587188, +
3.07e-86FFCP PHASE2:Mm9::chr1:138241693..138241697,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr1:138241693..138241697, +
3.07e-86FFCP PHASE1:Mm9::chr17:34798597..34798606,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr17:34798597..34798606, +
3.07e-86FFCP PHASE2:Mm9::chr4:62009160..62009164,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr4:62009160..62009164, -
3.07e-86FFCP PHASE1:Mm9::chr12:25364645..25364655,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr12:25364645..25364655, +
3.07e-86FFCP PHASE2:Mm9::chr10:85587155..85587188,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr10:85587155..85587188, +
3.07e-86FFCP PHASE2:Mm9::chr15:82193340..82193343,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr15:82193340..82193343, +
3.07e-86FFCP PHASE1:Mm9::chr6:34549876..34549892,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr6:34549876..34549892, -
3.07e-86FFCP PHASE2:Mm9::chr13:100000226..100000230,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr13:100000226..100000230, +
3.07e-86FFCP PHASE1:Mm9::chr4:100890388..100890423,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr4:100890388..100890423, +
3.07e-86FFCP PHASE2:Mm9::chr2:169549462..169549477,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr2:169549462..169549477, +
3.07e-86FFCP PHASE1:Mm9::chr9:42915185..42915192,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr9:42915185..42915192, -
3.07e-86FFCP PHASE2:Mm9::chr12:88237840..88237851,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr12:88237840..88237851, -
3.07e-86FFCP PHASE2:Mm9::chr8:25530071..25530072,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr8:25530071..25530072, +
3.07e-86FFCP PHASE1:Mm9::chr19:29573929..29573932,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr19:29573929..29573932, +
3.07e-86FFCP PHASE2:Mm9::chr11:109223756..109223764,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr11:109223756..109223764, -
3.07e-86FFCP PHASE1:Mm9::chr11:117829935..117829959,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr11:117829935..117829959, -
3.07e-86FFCP PHASE1:Mm9::chr5:32912678..32912687,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr5:32912678..32912687, +
3.07e-86FFCP PHASE1:Mm9::chr12:87046930..87046933,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr12:87046930..87046933, +
3.07e-86FFCP PHASE2:Mm9::chr2:129407463..129407468,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr2:129407463..129407468, -
3.07e-86FFCP PHASE1:Mm9::chr5:76329688..76329692,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr5:76329688..76329692, -
3.07e-86FFCP PHASE1:Mm9::chr13:113554186..113554192,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr13:113554186..113554192, +
3.07e-86FFCP PHASE1:Mm9::chr8:89310639..89310641,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr8:89310639..89310641, -
3.07e-86FFCP PHASE2:Mm9::chr4:141645056..141645068,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr4:141645056..141645068, +
3.07e-86FFCP PHASE1:Mm9::chr8:111108947..111108951,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr8:111108947..111108951, +
3.07e-86FFCP PHASE2:Mm9::chr12:86691530..86691535,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr12:86691530..86691535, -
3.07e-86FFCP PHASE1:Mm9::chr15:97402708..97402712,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr15:97402708..97402712, +
3.07e-86FFCP PHASE1:Mm9::chr6:92938260..92938264,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr6:92938260..92938264, -
3.07e-86FFCP PHASE1:Mm9::chr18:65159026..65159034,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr18:65159026..65159034, -
3.07e-86FFCP PHASE1:Mm9::chr9:62199266..62199267,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr9:62199266..62199267, +
3.07e-86FFCP PHASE1:Mm9::chr13:5840965..5840966,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr13:5840965..5840966, +
3.07e-86FFCP PHASE2:Mm9::chr18:39513150..39513152,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr18:39513150..39513152, +
3.07e-86FFCP PHASE1:Mm9::chr10:8471698..8471701,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr10:8471698..8471701, +
3.07e-86FFCP PHASE1:Mm9::chr2:84756280..84756286,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr2:84756280..84756286, +
3.07e-86FFCP PHASE2:Mm9::chr17:48822294..48822295,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr17:48822294..48822295, -
3.07e-86FFCP PHASE2:Mm9::chr17:28107053..28107062,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr17:28107053..28107062, -
3.07e-86FFCP PHASE1:Mm9::chr9:45920408..45920437,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr9:45920408..45920437, -
3.07e-86FFCP PHASE1:Mm9::chr2:133323630..133323631,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr2:133323630..133323631, +
3.07e-86FFCP PHASE1:Mm9::chr1:173044327..173044331,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr1:173044327..173044331, +
3.07e-86FFCP PHASE1:Mm9::chr14:8928284..8928331,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr14:8928284..8928331, +
3.07e-86FFCP PHASE2:Mm9::chr1:186559285..186559288,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr1:186559285..186559288, +
3.07e-86FFCP PHASE2:Mm9::chr10:85585949..85585969,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr10:85585949..85585969, -
3.07e-86FFCP PHASE1:Mm9::chr11:118287827..118287833,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr11:118287827..118287833, -
3.07e-86FFCP PHASE1:Mm9::chr4:86335502..86335509,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr4:86335502..86335509, +
3.07e-86FFCP PHASE1:Mm9::chr18:38831400..38831402,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr18:38831400..38831402, -
3.07e-86FFCP PHASE1:Mm9::chr11:68437375..68437378,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr11:68437375..68437378, +
3.07e-86FFCP PHASE2:Mm9::chr16:85801525..85801529,-#_4496c44f15d11b0db3cb2e6f67e2a000p6@Adamts1
3.07e-86FFCP PHASE2:Mm9::chr4:43407825..43407830,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr4:43407825..43407830, +
3.07e-86FFCP PHASE2:Mm9::chr9:42915220..42915225,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr9:42915220..42915225, -
3.07e-86FFCP PHASE2:Mm9::chr8:3311867..3311873,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr8:3311867..3311873, +
3.07e-86FFCP PHASE2:Mm9::chr1:66883923..66883955,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr1:66883923..66883955, -
3.07e-86FFCP PHASE1:Mm9::chr10:93942324..93942342,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr10:93942324..93942342, -
3.07e-86FFCP PHASE2:Mm9::chr18:35881716..35881727,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr18:35881716..35881727, -
3.07e-86FFCP PHASE1:Mm9::chr13:113542610..113542614,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr13:113542610..113542614, +
3.07e-86FFCP PHASE2:Mm9::chr2:84756280..84756286,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr2:84756280..84756286, +
3.07e-86FFCP PHASE1:Mm9::chr15:32178407..32178408,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr15:32178407..32178408, -
3.07e-86FFCP PHASE1:Mm9::chr12:86691503..86691504,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr12:86691503..86691504, -
3.07e-86FFCP PHASE2:Mm9::chr17:12388232..12388237,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr17:12388232..12388237, +
3.07e-86FFCP PHASE1:Mm9::chr14:15179132..15179141,+#_4496c44f15d11b0db3cb2e6f67e2a000p8@Il3ra
3.07e-86FFCP PHASE2:Mm9::chr17:35096519..35096524,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr17:35096519..35096524, +
3.07e-86FFCP PHASE2:Mm9::chr8:86713876..86713879,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr8:86713876..86713879, +
3.07e-86FFCP PHASE2:Mm9::chr15:88669906..88669914,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr15:88669906..88669914, +
3.07e-86FFCP PHASE1:Mm9::chr17:35093377..35093381,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr17:35093377..35093381, +
3.07e-86FFCP PHASE2:Mm9::chr15:59435855..59435878,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr15:59435855..59435878, -
3.07e-86FFCP PHASE2:Mm9::chr9:45920408..45920437,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr9:45920408..45920437, -
3.07e-86FFCP PHASE2:Mm9::chr15:82207617..82207621,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr15:82207617..82207621, +
3.07e-86FFCP PHASE1:Mm9::chr17:24807620..24807650,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr17:24807620..24807650, -
3.07e-86FFCP PHASE2:Mm9::chr11:68437375..68437378,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr11:68437375..68437378, +
3.07e-86FFCP PHASE1:Mm9::chr18:44793802..44793835,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr18:44793802..44793835, +
3.07e-86FFCP PHASE1:Mm9::chr9:42915220..42915225,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr9:42915220..42915225, -
3.07e-86FFCP PHASE2:Mm9::chr11:109223779..109223789,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr11:109223779..109223789, -
3.07e-86FFCP PHASE2:Mm9::chr6:34549876..34549892,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr6:34549876..34549892, -
3.07e-86FFCP PHASE1:Mm9::chr5:33088768..33088773,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr5:33088768..33088773, +
3.07e-86FFCP PHASE1:Mm9::chr13:96429295..96429302,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr13:96429295..96429302, -
3.07e-86FFCP PHASE2:Mm9::chrX:166418658..166418683,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chrX:166418658..166418683, +
3.07e-86FFCP PHASE2:Mm9::chr15:32178407..32178408,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr15:32178407..32178408, -
3.07e-86FFCP PHASE2:Mm9::chr5:64344878..64344887,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr5:64344878..64344887, -
3.07e-86FFCP PHASE1:Mm9::chr12:74684893..74684910,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr12:74684893..74684910, -
3.07e-86FFCP PHASE2:Mm9::chr2:133323630..133323631,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr2:133323630..133323631, +
3.07e-86FFCP PHASE1:Mm9::chr8:11183699..11183703,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr8:11183699..11183703, -
3.07e-86FFCP PHASE2:Mm9::chr6:91441074..91441080,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr6:91441074..91441080, -
3.07e-86FFCP PHASE2:Mm9::chr8:11183699..11183703,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr8:11183699..11183703, -
3.07e-86FFCP PHASE2:Mm9::chr12:86691575..86691580,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr12:86691575..86691580, -
3.07e-86FFCP PHASE2:Mm9::chr17:34796428..34796430,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr17:34796428..34796430, -
3.07e-86FFCP PHASE2:Mm9::chr11:88890706..88890745,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr11:88890706..88890745, +
3.07e-86FFCP PHASE2:Mm9::chr3:104857794..104857802,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr3:104857794..104857802, -
3.07e-86FFCP PHASE2:Mm9::chr6:48398664..48398684,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr6:48398664..48398684, -
3.07e-86FFCP PHASE1:Mm9::chr17:35096519..35096524,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr17:35096519..35096524, +
3.07e-86FFCP PHASE1:Mm9::chr10:85585949..85585969,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr10:85585949..85585969, -
3.07e-86FFCP PHASE2:Mm9::chr17:35093616..35093631,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr17:35093616..35093631, -
3.07e-86FFCP PHASE2:Mm9::chr18:4336287..4336296,-#_4496c44f15d11b0db3cb2e6f67e2a000p8@Map3k8
3.07e-86FFCP PHASE2:Mm9::chr18:47491114..47491123,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr18:47491114..47491123, +
3.07e-86FFCP PHASE1:Mm9::chr17:12388232..12388237,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr17:12388232..12388237, +
3.07e-86FFCP PHASE1:Mm9::chr8:127816016..127816021,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr8:127816016..127816021, +
3.07e-86FFCP PHASE1:Mm9::chr18:39297570..39297573,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr18:39297570..39297573, -
3.07e-86FFCP PHASE1:Mm9::chr12:100752983..100752984,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr12:100752983..100752984, +
3.07e-86FFCP PHASE2:Mm9::chr10:93819538..93819549,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr10:93819538..93819549, +
3.07e-86FFCP PHASE1:Mm9::chr2:11935531..11935538,-#_4496c44f15d11b0db3cb2e6f67e2a000p@chr2:11935531..11935538, -
3.07e-86FFCP PHASE1:Mm9::chr3:121593688..121593695,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr3:121593688..121593695, +
3.07e-86FFCP PHASE1:Mm9::chr15:82193340..82193343,+#_4496c44f15d11b0db3cb2e6f67e2a000p@chr15:82193340..82193343, +

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