UBERON:0003968: Difference between revisions
From FANTOM5_SSTAR
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|id=UBERON:0003968
|name=peripheral lymph node
|namespace=
|def="the lymph nodes located outside the thoracic and abdominal cavities, such as the submandibular, p...") |
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{{UBERON | {{UBERON | ||
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|comment= | |comment= | ||
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| | |def="the lymph nodes located outside the thoracic and abdominal cavities, such as the submandibular, prescapular, axillary, inguinal and popliteal lymph nodes" [MP:0008463] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0003968 | |||
|is_a=UBERON:0000029 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=peripheral lymph node | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|subset= | |||
|synonym= | |||
|union_of= | |||
|xref= | |||
}} | }} | ||
Latest revision as of 17:42, 12 September 2014
| Name: | peripheral lymph node |
|---|---|
| Namespace: | FANTOM |
| Definition: | "the lymph nodes located outside the thoracic and abdominal cavities, such as the submandibular, prescapular, axillary, inguinal and popliteal lymph nodes" [MP:0008463] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000029(lymph node) |
|---|
Children
| is a: | UBERON:0001097 (axillary lymph node) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Mouse (Mus musculus)
- 1063-29H9 (accessory axillary lymph node, adult)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003968 (peripheral lymph node), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.07e-86 | FFCP PHASE2:Mm9::chr16:19235714..19235723,-#_475652cfb2ae0214a5d9e0cd99ccbb72 | p@chr16:19235714..19235723, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:73409774..73409819,+#_475652cfb2ae0214a5d9e0cd99ccbb72 | p@chr10:73409774..73409819, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:73409774..73409819,+#_475652cfb2ae0214a5d9e0cd99ccbb72 | p@chr10:73409774..73409819, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr16:19235714..19235723,-#_475652cfb2ae0214a5d9e0cd99ccbb72 | p@chr16:19235714..19235723, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:93042811..93042816,-#_475652cfb2ae0214a5d9e0cd99ccbb72 | p@chr12:93042811..93042816, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:104978425..104978430,-#_475652cfb2ae0214a5d9e0cd99ccbb72 | p@chr12:104978425..104978430, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:98457062..98457072,+#_475652cfb2ae0214a5d9e0cd99ccbb72 | p@chr15:98457062..98457072, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr8:3918216..3918219,-#_475652cfb2ae0214a5d9e0cd99ccbb72 | p@chr8:3918216..3918219, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:104978425..104978430,-#_475652cfb2ae0214a5d9e0cd99ccbb72 | p@chr12:104978425..104978430, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:5405967..5405985,+#_475652cfb2ae0214a5d9e0cd99ccbb72 | p@chr11:5405967..5405985, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:98457111..98457118,+#_475652cfb2ae0214a5d9e0cd99ccbb72 | p@chr15:98457111..98457118, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:32325858..32325865,+#_475652cfb2ae0214a5d9e0cd99ccbb72 | p18@Bach2 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:114567506..114567507,-#_475652cfb2ae0214a5d9e0cd99ccbb72 | p@chr12:114567506..114567507, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:98457062..98457072,+#_475652cfb2ae0214a5d9e0cd99ccbb72 | p@chr15:98457062..98457072, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:32325858..32325865,+#_475652cfb2ae0214a5d9e0cd99ccbb72 | p18@Bach2 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:5405967..5405985,+#_475652cfb2ae0214a5d9e0cd99ccbb72 | p@chr11:5405967..5405985, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:93042811..93042816,-#_475652cfb2ae0214a5d9e0cd99ccbb72 | p@chr12:93042811..93042816, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:122604700..122604706,-#_475652cfb2ae0214a5d9e0cd99ccbb72 | p@chr4:122604700..122604706, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:37383896..37383899,+#_475652cfb2ae0214a5d9e0cd99ccbb72 | p2@ENSMUST00000172477 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:3918216..3918219,-#_475652cfb2ae0214a5d9e0cd99ccbb72 | p@chr8:3918216..3918219, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:37383896..37383899,+#_475652cfb2ae0214a5d9e0cd99ccbb72 | p2@ENSMUST00000172477 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:98457111..98457118,+#_475652cfb2ae0214a5d9e0cd99ccbb72 | p@chr15:98457111..98457118, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:114567506..114567507,-#_475652cfb2ae0214a5d9e0cd99ccbb72 | p@chr12:114567506..114567507, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:122604700..122604706,-#_475652cfb2ae0214a5d9e0cd99ccbb72 | p@chr4:122604700..122604706, - |
| 2.74e-44 | FFCP PHASE1:Mm9::chr4:130488147..130488154,+#_5bf07a1162f0daa371e49c8ea25ea18f | p@chr4:130488147..130488154, + |
| 2.74e-44 | FFCP PHASE1:Mm9::chr15:100610674..100610678,+#_5bf07a1162f0daa371e49c8ea25ea18f | p@chr15:100610674..100610678, + |
| 2.74e-44 | FFCP PHASE2:Mm9::chr6:129628862..129628871,-#_5bf07a1162f0daa371e49c8ea25ea18f | p@chr6:129628862..129628871, - |
| 2.74e-44 | FFCP PHASE2:Mm9::chr4:130488147..130488154,+#_5bf07a1162f0daa371e49c8ea25ea18f | p@chr4:130488147..130488154, + |
| 2.74e-44 | FFCP PHASE2:Mm9::chr6:127022920..127022928,+#_5bf07a1162f0daa371e49c8ea25ea18f | p1@Fgf23 |
| 2.74e-44 | FFCP PHASE2:Mm9::chr1:156901987..156901994,-#_5bf07a1162f0daa371e49c8ea25ea18f | p@chr1:156901987..156901994, - |
| 2.74e-44 | FFCP PHASE2:Mm9::chr15:100610674..100610678,+#_5bf07a1162f0daa371e49c8ea25ea18f | p@chr15:100610674..100610678, + |
| 2.74e-44 | FFCP PHASE2:Mm9::chr2:152582794..152582807,+#_5bf07a1162f0daa371e49c8ea25ea18f | p@chr2:152582794..152582807, + |
| 2.74e-44 | FFCP PHASE1:Mm9::chr6:129628862..129628871,-#_5bf07a1162f0daa371e49c8ea25ea18f | p@chr6:129628862..129628871, - |
| 2.74e-44 | FFCP PHASE1:Mm9::chr3:87316559..87316571,-#_5bf07a1162f0daa371e49c8ea25ea18f | p@chr3:87316559..87316571, - |
| 2.74e-44 | FFCP PHASE1:Mm9::chr2:152582794..152582807,+#_5bf07a1162f0daa371e49c8ea25ea18f | p@chr2:152582794..152582807, + |
| 2.74e-44 | FFCP PHASE1:Mm9::chr6:127022920..127022928,+#_5bf07a1162f0daa371e49c8ea25ea18f | p1@Fgf23 |
| 2.74e-44 | FFCP PHASE2:Mm9::chr3:87316559..87316571,-#_5bf07a1162f0daa371e49c8ea25ea18f | p@chr3:87316559..87316571, - |
| 2.74e-44 | FFCP PHASE1:Mm9::chr1:156901987..156901994,-#_5bf07a1162f0daa371e49c8ea25ea18f | p@chr1:156901987..156901994, - |
| 7.47e-44 | FFCP PHASE2:Mm9::chr17:73460572..73460579,+#_e5065fb13036c156071ae70b17b24492 | p@chr17:73460572..73460579, + |
| 7.47e-44 | FFCP PHASE2:Mm9::chr8:22042143..22042150,-#_e5065fb13036c156071ae70b17b24492 | p1@Gm15056, p1@LOC100504014 |
| 7.47e-44 | FFCP PHASE1:Mm9::chr13:83714297..83714301,+#_e5065fb13036c156071ae70b17b24492 | p@chr13:83714297..83714301, + |
| 7.47e-44 | FFCP PHASE2:Mm9::chr1:156901880..156901891,-#_e5065fb13036c156071ae70b17b24492 | p@chr1:156901880..156901891, - |
| 7.47e-44 | FFCP PHASE1:Mm9::chr17:73460572..73460579,+#_e5065fb13036c156071ae70b17b24492 | p@chr17:73460572..73460579, + |
| 7.47e-44 | FFCP PHASE1:Mm9::chr2:26524291..26524300,-#_e5065fb13036c156071ae70b17b24492 | p@chr2:26524291..26524300, - |
| 7.47e-44 | FFCP PHASE1:Mm9::chrX:13200511..13200521,+#_e5065fb13036c156071ae70b17b24492 | p@chrX:13200511..13200521, + |
| 7.47e-44 | FFCP PHASE2:Mm9::chr13:83714297..83714301,+#_e5065fb13036c156071ae70b17b24492 | p@chr13:83714297..83714301, + |
| 7.47e-44 | FFCP PHASE2:Mm9::chr1:69594451..69594464,-#_e5065fb13036c156071ae70b17b24492 | p@chr1:69594451..69594464, - |
| 7.47e-44 | FFCP PHASE1:Mm9::chr2:70769189..70769223,+#_e5065fb13036c156071ae70b17b24492 | p@chr2:70769189..70769223, + |
| 7.47e-44 | FFCP PHASE2:Mm9::chrX:13200511..13200521,+#_e5065fb13036c156071ae70b17b24492 | p@chrX:13200511..13200521, + |
| 7.47e-44 | FFCP PHASE1:Mm9::chr17:73506745..73506750,+#_e5065fb13036c156071ae70b17b24492 | p@chr17:73506745..73506750, + |
| 7.47e-44 | FFCP PHASE2:Mm9::chr17:73506745..73506750,+#_e5065fb13036c156071ae70b17b24492 | p@chr17:73506745..73506750, + |
| 7.47e-44 | FFCP PHASE1:Mm9::chr1:69594451..69594464,-#_e5065fb13036c156071ae70b17b24492 | p@chr1:69594451..69594464, - |
| 7.47e-44 | FFCP PHASE1:Mm9::chr1:156901880..156901891,-#_e5065fb13036c156071ae70b17b24492 | p@chr1:156901880..156901891, - |
| 7.47e-44 | FFCP PHASE1:Mm9::chr5:111607677..111607689,-#_e5065fb13036c156071ae70b17b24492 | p@chr5:111607677..111607689, - |
| 7.47e-44 | FFCP PHASE1:Mm9::chr8:22042143..22042150,-#_e5065fb13036c156071ae70b17b24492 | p1@Gm15056, p1@LOC100504014 |
| 7.47e-44 | FFCP PHASE1:Mm9::chrX:7157626..7157635,+#_e5065fb13036c156071ae70b17b24492 | p3@Foxp3 |
| 7.47e-44 | FFCP PHASE2:Mm9::chr2:70769189..70769223,+#_e5065fb13036c156071ae70b17b24492 | p@chr2:70769189..70769223, + |
| 7.47e-44 | FFCP PHASE2:Mm9::chrX:7157626..7157635,+#_e5065fb13036c156071ae70b17b24492 | p3@Foxp3 |
| 7.47e-44 | FFCP PHASE2:Mm9::chr2:26524291..26524300,-#_e5065fb13036c156071ae70b17b24492 | p@chr2:26524291..26524300, - |
| 7.47e-44 | FFCP PHASE2:Mm9::chr5:111607677..111607689,-#_e5065fb13036c156071ae70b17b24492 | p@chr5:111607677..111607689, - |
| 2.87e-30 | FFCP PHASE1:Mm9::chr14:101862396..101862406,-#_57de94185df0c038d65c572617c19e2e | p7@Tbc1d4 |
| 2.87e-30 | FFCP PHASE2:Mm9::chr6:43026981..43026982,-#_57de94185df0c038d65c572617c19e2e | p@chr6:43026981..43026982, - |
| 2.87e-30 | FFCP PHASE2:Mm9::chr1:175421064..175421071,-#_57de94185df0c038d65c572617c19e2e | p@chr1:175421064..175421071, - |
| 2.87e-30 | FFCP PHASE1:Mm9::chr10:77555495..77555503,-#_57de94185df0c038d65c572617c19e2e | p@chr10:77555495..77555503, - |
| 2.87e-30 | FFCP PHASE1:Mm9::chr2:153750777..153750817,+#_57de94185df0c038d65c572617c19e2e | p@chr2:153750777..153750817, + |
| 2.87e-30 | FFCP PHASE2:Mm9::chr3:60276705..60276708,+#_57de94185df0c038d65c572617c19e2e | p35@Mbnl1 |
| 2.87e-30 | FFCP PHASE1:Mm9::chr17:75917733..75917762,-#_57de94185df0c038d65c572617c19e2e | p@chr17:75917733..75917762, - |
| 2.87e-30 | FFCP PHASE2:Mm9::chr2:153750777..153750817,+#_57de94185df0c038d65c572617c19e2e | p@chr2:153750777..153750817, + |
| 2.87e-30 | FFCP PHASE1:Mm9::chr1:175421064..175421071,-#_57de94185df0c038d65c572617c19e2e | p@chr1:175421064..175421071, - |
| 2.87e-30 | FFCP PHASE2:Mm9::chr16:19236303..19236306,-#_57de94185df0c038d65c572617c19e2e | p@chr16:19236303..19236306, - |
| 2.87e-30 | FFCP PHASE2:Mm9::chr10:77555495..77555503,-#_57de94185df0c038d65c572617c19e2e | p@chr10:77555495..77555503, - |
| 2.87e-30 | FFCP PHASE1:Mm9::chr9:63685871..63685874,-#_57de94185df0c038d65c572617c19e2e | p@chr9:63685871..63685874, - |
| 2.87e-30 | FFCP PHASE2:Mm9::chr17:75917733..75917762,-#_57de94185df0c038d65c572617c19e2e | p@chr17:75917733..75917762, - |
| 2.87e-30 | FFCP PHASE2:Mm9::chr9:63685871..63685874,-#_57de94185df0c038d65c572617c19e2e | p@chr9:63685871..63685874, - |
| 2.87e-30 | FFCP PHASE1:Mm9::chr16:19236303..19236306,-#_57de94185df0c038d65c572617c19e2e | p@chr16:19236303..19236306, - |
| 2.87e-30 | FFCP PHASE1:Mm9::chr3:60276705..60276708,+#_57de94185df0c038d65c572617c19e2e | p35@Mbnl1 |
| 2.87e-30 | FFCP PHASE1:Mm9::chr6:43026981..43026982,-#_57de94185df0c038d65c572617c19e2e | p@chr6:43026981..43026982, - |
| 2.87e-30 | FFCP PHASE2:Mm9::chr14:101862396..101862406,-#_57de94185df0c038d65c572617c19e2e | p7@Tbc1d4 |
| 5.62e-30 | FFCP PHASE2:Mm9::chr1:152303107..152303115,-#_d10187f01a680de6bfe9d85dc453ddaa | p@chr1:152303107..152303115, - |
| 5.62e-30 | FFCP PHASE1:Mm9::chr17:65245146..65245162,+#_d10187f01a680de6bfe9d85dc453ddaa | p@chr17:65245146..65245162, + |
| 5.62e-30 | FFCP PHASE1:Mm9::chr12:3463400..3463409,+#_d10187f01a680de6bfe9d85dc453ddaa | p@chr12:3463400..3463409, + |
| 5.62e-30 | FFCP PHASE2:Mm9::chr5:68157953..68157957,-#_d10187f01a680de6bfe9d85dc453ddaa | p@chr5:68157953..68157957, - |
| 5.62e-30 | FFCP PHASE1:Mm9::chr15:27700724..27700733,+#_d10187f01a680de6bfe9d85dc453ddaa | p@chr15:27700724..27700733, + |
| 5.62e-30 | FFCP PHASE1:Mm9::chrX:7156827..7156838,+#_d10187f01a680de6bfe9d85dc453ddaa | p2@Foxp3 |
| 5.62e-30 | FFCP PHASE2:Mm9::chr1:69595291..69595300,-#_d10187f01a680de6bfe9d85dc453ddaa | p@chr1:69595291..69595300, - |
| 5.62e-30 | FFCP PHASE2:Mm9::chrX:7156827..7156838,+#_d10187f01a680de6bfe9d85dc453ddaa | p2@Foxp3 |
| 5.62e-30 | FFCP PHASE1:Mm9::chr10:96058243..96058251,-#_d10187f01a680de6bfe9d85dc453ddaa | p@chr10:96058243..96058251, - |
| 5.62e-30 | FFCP PHASE1:Mm9::chr5:68157953..68157957,-#_d10187f01a680de6bfe9d85dc453ddaa | p@chr5:68157953..68157957, - |
| 5.62e-30 | FFCP PHASE1:Mm9::chr16:18588911..18588925,-#_d10187f01a680de6bfe9d85dc453ddaa | p@chr16:18588911..18588925, - |
| 5.62e-30 | FFCP PHASE2:Mm9::chr10:96058243..96058251,-#_d10187f01a680de6bfe9d85dc453ddaa | p@chr10:96058243..96058251, - |
| 5.62e-30 | FFCP PHASE1:Mm9::chr1:69595291..69595300,-#_d10187f01a680de6bfe9d85dc453ddaa | p@chr1:69595291..69595300, - |
| 5.62e-30 | FFCP PHASE1:Mm9::chr13:93865596..93865618,+#_d10187f01a680de6bfe9d85dc453ddaa | p@chr13:93865596..93865618, + |
| 5.62e-30 | FFCP PHASE2:Mm9::chr12:3463400..3463409,+#_d10187f01a680de6bfe9d85dc453ddaa | p@chr12:3463400..3463409, + |
| 5.62e-30 | FFCP PHASE2:Mm9::chr17:65245146..65245162,+#_d10187f01a680de6bfe9d85dc453ddaa | p@chr17:65245146..65245162, + |
| 5.62e-30 | FFCP PHASE2:Mm9::chr13:93865596..93865618,+#_d10187f01a680de6bfe9d85dc453ddaa | p@chr13:93865596..93865618, + |
| 5.62e-30 | FFCP PHASE1:Mm9::chr1:152303107..152303115,-#_d10187f01a680de6bfe9d85dc453ddaa | p@chr1:152303107..152303115, - |
| 5.62e-30 | FFCP PHASE2:Mm9::chr16:18588911..18588925,-#_d10187f01a680de6bfe9d85dc453ddaa | p@chr16:18588911..18588925, - |
| 5.62e-30 | FFCP PHASE2:Mm9::chr15:27700724..27700733,+#_d10187f01a680de6bfe9d85dc453ddaa | p@chr15:27700724..27700733, + |
| 1.1e-29 | FFCP PHASE1:Mm9::chr11:75828956..75828969,-#_cd0d0b58309c5e8b6546457bb1ee606d | p@chr11:75828956..75828969, - |
| 1.1e-29 | FFCP PHASE1:Mm9::chr7:108912031..108912038,+#_cd0d0b58309c5e8b6546457bb1ee606d | p9@Clpb |
