UBERON:0004537: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def="a vascular network consisting of blood vessels" [UBERON:cjm] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0004537 | |||
|is_a=UBERON:0002049 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|part_of= | |name=blood vasculature | ||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0004535 | |||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym="blood vascular network" EXACT [];;"set of blood vessels" EXACT [] | ||
|union_of= | |||
|xref=TAO:0001079;;ZFA:0001079 | |||
}} | }} | ||
Latest revision as of 17:46, 12 September 2014
| Name: | blood vasculature | |
|---|---|---|
| Namespace: | FANTOM | |
| Definition: | "a vascular network consisting of blood vessels" [UBERON:cjm] | |
| Xrefs: |
| |
| Synonyms: |
"blood vascular network" EXACT [] "set of blood vessels" EXACT [] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0002049(vasculature) |
|---|---|
| part_of: | UBERON:0004535(cardiovascular system) |
Children
| is a: | UBERON:0011362 (cranial blood vasculature) |
|---|---|
| part of: | UBERON:0001981 (blood vessel) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10052-101G7 (aorta, adult, pool1)
- 10190-103E1 (artery, adult)
- 10191-103E2 (vein, adult)
- 11207-116A1 (Endothelial Cells - Aortic, donor0)
- 11210-116A4 (Smooth Muscle Cells - Aortic, donor0)
- 11212-116A6 (Smooth Muscle Cells - Umbilical artery, donor0)
- 11243-116E1 (Endothelial Cells - Umbilical vein, donor1)
- 11244-116E2 (Canine hepatocytes, donor1)
- 11245-116E3 (Fibroblast - Aortic Adventitial, donor1)
- 11250-116E8 (Fibroblast - Pulmonary Artery, donor1)
... further results Mouse (Mus musculus)
- 10052-101G7 (aorta, adult, pool1)
- 10190-103E1 (artery, adult)
- 10191-103E2 (vein, adult)
- 11207-116A1 (Endothelial Cells - Aortic, donor0)
- 11210-116A4 (Smooth Muscle Cells - Aortic, donor0)
- 11212-116A6 (Smooth Muscle Cells - Umbilical artery, donor0)
- 11243-116E1 (Endothelial Cells - Umbilical vein, donor1)
- 11244-116E2 (Canine hepatocytes, donor1)
- 11245-116E3 (Fibroblast - Aortic Adventitial, donor1)
- 11250-116E8 (Fibroblast - Pulmonary Artery, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004537 (blood vasculature), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
